Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 6.7e-224 780.4 405 100.0
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 4.3e-114 415.6 358 62.6
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 1.2e-111 407.5 367 62.7
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 5.3e-104 382.1 341 65.1
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 9.0e-104 381.3 365 58.1
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 3.6e-100 369.4 373 58.4
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 6.1e-100 368.6 373 58.4
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 1.8e-99 367.1 372 57.5
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 2.2e-97 360.1 364 58.8
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 6.3e-97 358.6 361 57.9
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 1.7e-94 350.5 366 54.6
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 2.2e-94 350.1 361 56.0
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 2.7e-92 343.2 394 53.6
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 1.4e-91 340.9 337 57.3
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 1.1e-90 337.8 362 56.6
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.6e-90 336.7 362 55.5
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 7.4e-90 335.1 364 54.7
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 9.7e-90 334.7 365 56.4
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 1.3e-89 334.3 376 52.9
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 2.2e-89 333.6 371 53.9
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 2.8e-89 333.2 368 55.2
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 3.7e-89 332.8 364 54.7
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 8.2e-89 331.6 370 54.6
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 2.4e-88 330.1 364 53.8
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 1.5e-87 327.4 364 52.5
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 4.5e-87 325.9 373 53.6
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 1.7e-86 323.9 364 53.0
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 3.8e-86 322.8 370 54.9
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 5.0e-86 322.4 366 50.8
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 5.0e-86 322.4 367 51.8
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 5.0e-86 322.4 366 51.4
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 1.1e-85 321.2 367 51.8
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 2.5e-85 320.1 364 54.9
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 2.5e-85 320.1 367 52.3
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 3.2e-85 319.7 370 54.6
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 7.2e-85 318.5 367 51.2
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 9.4e-85 318.2 365 53.7
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 6.1e-84 315.5 361 50.4
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 6.1e-84 315.5 362 50.8
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 8.0e-84 315.1 361 50.4
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 1.0e-83 314.7 327 55.0
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 1.4e-83 314.3 370 51.1
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 2.3e-83 313.5 361 50.1
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 2.3e-83 313.5 361 50.1
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 3.9e-83 312.8 340 53.5
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 5.2e-83 312.4 360 49.4
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 6.7e-83 312.0 361 49.9
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 1.1e-82 311.2 362 51.7
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 2.6e-82 310.1 319 54.2
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 2.6e-82 310.1 341 53.4
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.6e-82 310.1 360 54.4
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 5.7e-82 308.9 364 49.2
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 5.7e-82 308.9 361 49.9
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 1.7e-81 307.4 362 50.0
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 6.3e-81 305.4 359 51.5
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 8.2e-81 305.1 363 52.3
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 1.4e-80 304.3 362 52.2
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 2.4e-80 303.5 361 50.7
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 3.1e-80 303.1 367 50.1
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 4.1e-80 302.8 305 55.1
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 7.0e-80 302.0 366 49.5
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 1.6e-79 300.8 376 47.6
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 2.6e-79 300.1 376 47.1
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 2.6e-79 300.1 329 52.3
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 3.5e-79 299.7 373 49.9
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 5.9e-79 298.9 301 54.2
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 5.9e-79 298.9 362 48.6
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 7.7e-79 298.5 363 47.7
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 1.3e-78 297.7 361 48.2
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 6.5e-78 295.4 379 50.9
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 1.5e-77 294.3 305 52.1
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 2.5e-77 293.5 337 54.0
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 3.2e-77 293.1 319 51.1
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 2.7e-76 290.0 377 48.3
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 2.7e-76 290.0 366 47.3
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 2.7e-76 290.0 356 46.6
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 5.2e-75 285.8 366 46.7
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 6.7e-75 285.4 372 46.8
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 6.7e-75 285.4 353 45.9
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 2.0e-74 283.9 363 47.4
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 5.7e-74 282.3 367 48.0
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 1.7e-73 280.8 359 45.7
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 1.7e-73 280.8 370 48.6
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 2.2e-73 280.4 366 45.6
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 2.8e-73 280.0 366 46.2
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 2.8e-73 280.0 366 46.2
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 3.7e-73 279.6 306 49.7
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 3.7e-73 279.6 304 52.3
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 6.3e-73 278.9 322 53.4
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 6.3e-73 278.9 367 46.9
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 8.2e-73 278.5 332 50.0
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 1.4e-72 277.7 365 45.8
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.8e-72 277.3 322 53.1
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 1.6e-71 274.2 308 51.6
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 4.5e-71 272.7 303 48.2
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 2.6e-66 256.9 333 47.7
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 6.3e-65 252.3 331 46.5
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 1.1e-64 251.5 301 49.5
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 2.0e-63 247.3 354 45.8
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 2.9e-62 243.4 297 48.5
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 6.1e-60 235.7 238 58.0
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 1.0e-59 235.0 344 44.5
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 4.4e-58 229.6 336 45.8
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 8.3e-57 225.3 254 51.2
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 5.4e-56 222.6 253 49.8
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 1.5e-53 214.5 231 55.8
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 4.3e-53 213.0 336 44.0
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 1.8e-51 207.6 378 41.3
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 3.4e-50 203.4 322 41.6
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 6.4e-49 199.1 278 48.2
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 3.5e-47 193.4 296 40.5
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 1.1e-45 188.3 236 44.5
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 1.5e-45 188.0 224 52.2
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 1.4e-43 181.4 255 45.1
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 1.7e-38 164.5 295 36.6
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 2.3e-38 164.1 163 56.4
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 8.1e-36 155.6 299 35.1
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 4.9e-33 146.4 296 36.5
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 1.6e-31 141.4 299 36.1
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 1.3e-30 138.3 377 36.1
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 1.2e-23 115.2 137 48.2
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 2.1e-20 104.4 208 38.9
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 2.6e-18 97.4 321 30.8
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 2.6e-18 97.4 193 37.8
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 7.8e-15 85.9 205 33.2
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 1.4e-11 75.1 158 34.2
PRCOL_00003529 Prasinoderma coloniale HOM05D006219 ORTHO05D007562 1.8e-11 74.7 301 27.6
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 6.9e-11 72.8 78 50.0
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 4.5e-10 70.1 303 24.1


User provided reference genes

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