Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 2.8e-82 308.5 155 100.0
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 6.6e-39 164.5 176 54.0
Migut.E00933 Erythranthe guttata HOM05D008113 ORTHO05D009793 5.3e-36 154.8 169 55.0
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 5.8e-19 98.2 167 40.1
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 5.8e-19 98.2 167 40.1
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 5.8e-19 98.2 176 38.1
unitig_22.g5500 Utricularia gibba HOM05D008113 ORTHO05D009793 8.4e-18 94.4 155 45.8
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 1.1e-17 94.0 160 40.6
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 1.1e-17 94.0 167 41.3
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 1.4e-17 93.6 176 39.2
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 1.8e-15 86.7 160 41.2
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 1.8e-15 86.7 172 39.0
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 2.3e-15 86.3 164 40.9
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 2.3e-15 86.3 164 40.9
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 2.3e-15 86.3 167 40.1
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 5.1e-15 85.1 175 35.4
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 6.7e-15 84.7 169 38.5
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 6.7e-15 84.7 173 37.0
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 8.7e-15 84.3 165 40.6
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.1e-14 84.0 169 39.6
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 1.5e-14 83.6 172 36.6
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 1.5e-14 83.6 167 37.7
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 3.3e-14 82.4 161 39.1
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 4.3e-14 82.0 161 38.5
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 1.3e-13 80.5 137 40.9
THA.LOC104814445 Tarenaya hassleriana HOM05D008113 ORTHO05D009793 1.3e-13 80.5 154 41.6
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 3.7e-13 79.0 177 34.5
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 6.3e-13 78.2 167 37.1
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 8.2e-13 77.8 153 38.6
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 1.1e-12 77.4 174 36.2
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 1.1e-12 77.4 174 35.6
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 1.1e-12 77.4 174 35.1
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.8e-12 76.6 167 36.5
Sp1g28300 Schrenkiella parvula HOM05D012772 ORTHO05D009793 2.4e-12 76.3 148 36.5
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 3.1e-12 75.9 153 36.6
Ah.12g055040 Amaranthus hybridus HOM05D008113 ORTHO05D009793 4.1e-12 75.5 157 39.5
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 5.3e-12 75.1 170 31.8
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 9.0e-12 74.3 179 35.2
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 9.0e-12 74.3 154 37.7
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 9.0e-12 74.3 167 36.5
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 1.5e-11 73.6 164 37.8
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 1.5e-11 73.6 161 36.6
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 2.0e-11 73.2 164 36.0
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 2.0e-11 73.2 167 35.3
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 2.6e-11 72.8 170 32.9
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 2.6e-11 72.8 90 48.9
Thhalv10009063m.g Eutrema salsugineum HOM05D012772 ORTHO05D009793 4.5e-11 72.0 142 38.7
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 5.9e-11 71.6 168 32.7
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 1.0e-10 70.9 168 32.7
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 1.0e-10 70.9 176 35.8
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 2.9e-10 69.3 101 44.6
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 5.0e-10 68.6 169 35.5
SGA_v2.0_scaffold139G35371 Striga asiatica HOM05D005250 ORTHO05D006342 6.5e-10 68.2 44 81.8
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 8.5e-10 67.8 166 33.7
EL10Ac5g12119 Beta vulgaris HOM05D008113 ORTHO05D009793 1.9e-09 66.6 90 43.3
Carub.0001s3101 Capsella rubella HOM05D012772 ORTHO05D009793 1.9e-09 66.6 142 35.9
PSO782G0685 Papaver somniferum HOM05D008113 ORTHO05D009793 2.5e-09 66.2 166 34.3
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 2.5e-09 66.2 200 30.5
PSO063G7600 Papaver somniferum HOM05D008113 ORTHO05D009793 3.2e-09 65.9 168 33.9
AUR62018715 Chenopodium quinoa HOM05D008113 ORTHO05D009793 7.2e-09 64.7 87 43.7
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 7.2e-09 64.7 176 31.2
AUR62007292 Chenopodium quinoa HOM05D008113 ORTHO05D009793 1.2e-08 63.9 95 40.0
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 1.2e-08 63.9 157 36.9
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 1.6e-08 63.5 177 31.6
CARHR032060 Cardamine hirsuta HOM05D012772 ORTHO05D009793 2.7e-08 62.8 145 36.6
SGA_v2.0_scaffold89G27590 Striga asiatica HOM05D000681 ORTHO05D009793 2.7e-08 62.8 48 66.7
unitig_8.g3919 Utricularia gibba HOM05D008113 ORTHO05D009793 6.1e-08 61.6 55 58.2
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 7.9e-08 61.2 100 41.0
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 7.9e-08 61.2 170 31.2
HanXRQChr11g0339791 Helianthus annuus HOM05D008113 ORTHO05D009793 1.0e-07 60.8 162 30.9
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 5.1e-07 58.5 153 33.3
Sopen08g001050 Solanum pennellii HOM05D023668 ORTHO05D009793 4.3e-06 55.5 208 27.9
HPP92_014861 Vanilla planifolia HOM05D008113 ORTHO05D009793 7.4e-06 54.7 159 31.4


User provided reference genes

Program Settings