Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09256 Striga asiatica HOM05D006103 ORTHO05D007468 3.3e-165 585.1 320 100.0
MSTRG.13771 Avicennia marina HOM05D006103 ORTHO05D007468 1.3e-110 403.7 323 69.7
Oeu054287.1 Olea europaea HOM05D006103 ORTHO05D007468 1.6e-103 380.2 326 68.4
Migut.E01036 Erythranthe guttata HOM05D006103 ORTHO05D007468 8.7e-102 374.4 320 67.2
Migut.E01310 Erythranthe guttata HOM05D006103 ORTHO05D007468 8.7e-102 374.4 320 67.2
Dinv25153 Davidia involucrata HOM05D006103 ORTHO05D007468 2.2e-97 359.8 309 66.3
unitig_699.g19773 Utricularia gibba HOM05D006103 ORTHO05D007468 5.0e-97 358.6 346 62.4
Cc08_g11160 Coffea canephora HOM05D006103 ORTHO05D007468 1.2e-95 354.0 317 64.4
Duzib205G0801 Durio zibethinus HOM05D006103 ORTHO05D007468 1.8e-94 350.1 308 66.9
CAN.G422.12 Capsicum annuum HOM05D006103 ORTHO05D007468 5.1e-94 348.6 318 64.8
CSS0027189 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 8.7e-94 347.8 318 62.9
Lj8A286T53 Lonicera japonica HOM05D006103 ORTHO05D007468 1.1e-93 347.4 315 63.2
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 1.1e-93 347.4 312 63.8
Gohir.D08G182200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 3.3e-93 345.9 313 64.5
Gorai.004G191100 Gossypium raimondii HOM05D006103 ORTHO05D007468 5.7e-93 345.1 313 64.5
CSS0016826 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 2.2e-92 343.2 320 62.8
Prupe.5G053300 Prunus persica HOM05D006103 ORTHO05D007468 3.7e-92 342.4 323 61.3
Lsat_1_v5_gn_6_94780 Lactuca sativa HOM05D006103 ORTHO05D007468 4.8e-92 342.0 311 65.6
Thecc.03G237900 Theobroma cacao HOM05D006103 ORTHO05D007468 2.4e-91 339.7 315 63.5
Lj8C280G0 Lonicera japonica HOM05D006103 ORTHO05D007468 3.1e-91 339.3 315 56.8
Gohir.A08G162200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 5.3e-91 338.6 313 63.9
Actinidia03414 Actinidia chinensis HOM05D006103 ORTHO05D007468 9.1e-91 337.8 312 62.2
FvH4_5g20690 Fragaria vesca HOM05D006103 ORTHO05D007468 4.5e-90 335.5 326 61.0
Sopen06g021130 Solanum pennellii HOM05D006103 ORTHO05D007468 4.5e-90 335.5 327 61.2
CANSAT21G0053 Cannabis sativa HOM05D006103 ORTHO05D007468 5.9e-90 335.1 311 60.8
FAN18G2558 Fragaria x ananassa HOM05D006103 ORTHO05D007468 5.9e-90 335.1 327 60.9
Nitab4.5_0000506g0180 Nicotiana tabacum HOM05D006103 ORTHO05D007468 7.7e-90 334.7 329 61.4
Ciclev10021261m.g Citrus clementina HOM05D006103 ORTHO05D007468 1.0e-89 334.3 308 63.3
FAN04G1103 Fragaria x ananassa HOM05D006103 ORTHO05D007468 1.3e-89 334.0 317 61.5
Solyc06g060990.4 Solanum lycopersicum HOM05D006103 ORTHO05D007468 1.3e-89 334.0 328 61.6
FAN08G0488 Fragaria x ananassa HOM05D006103 ORTHO05D007468 2.2e-89 333.2 320 61.2
DCAR_004514 Daucus carota HOM05D006103 ORTHO05D007468 3.8e-89 332.4 330 59.4
VMungo0251G0880 Vigna mungo HOM05D006103 ORTHO05D007468 8.5e-89 331.3 317 60.6
FAN13G0941 Fragaria x ananassa HOM05D006103 ORTHO05D007468 1.1e-88 330.9 320 60.9
RcHm_v2.0_Chr7g0206421 Rosa chinensis HOM05D006103 ORTHO05D007468 1.4e-88 330.5 332 59.0
PSO063G5173 Papaver somniferum HOM05D006103 ORTHO05D007468 2.5e-88 329.7 321 57.9
PGR042G3635 Punica granatum HOM05D006103 ORTHO05D007468 3.2e-88 329.3 314 62.7
Cpa.g.sc98.70 Carica papaya HOM05D006103 ORTHO05D007468 4.2e-88 328.9 320 56.6
ClCG10G002100 Citrullus lanatus HOM05D006103 ORTHO05D007468 4.2e-88 328.9 325 59.7
Manes.17G024600 Manihot esculenta HOM05D006103 ORTHO05D007468 4.2e-88 328.9 314 61.8
QL12p008443 Quercus lobata HOM05D006103 ORTHO05D007468 4.2e-88 328.9 312 61.2
Sabra01G0119800 Salix brachista HOM05D006103 ORTHO05D007468 4.2e-88 328.9 311 63.3
Potri.001G149800 Populus trichocarpa HOM05D006103 ORTHO05D007468 5.5e-88 328.6 304 63.5
PGSC0003DMG400026583 Solanum tuberosum HOM05D006103 ORTHO05D007468 5.5e-88 328.6 322 61.8
arahy.Tifrunner.gnm1.ann1.GKQN4T Arachis hypogaea HOM05D006103 ORTHO05D007468 2.1e-87 326.6 318 61.0
Carub.0008s0066 Capsella rubella HOM05D006103 ORTHO05D007468 2.1e-87 326.6 307 62.9
CARHR174300 Cardamine hirsuta HOM05D006103 ORTHO05D007468 2.1e-87 326.6 311 55.9
CsaV3_3G002190 Cucumis sativus L. HOM05D006103 ORTHO05D007468 2.7e-87 326.2 333 58.9
Haze_08348 Corylus avellana HOM05D006103 ORTHO05D007468 3.6e-87 325.9 319 61.4
Atru.chr9.1156 Acer truncatum HOM05D006103 ORTHO05D007468 1.0e-86 324.3 310 61.3
Glyma.05G067000 Glycine max HOM05D006103 ORTHO05D007468 1.4e-86 323.9 311 60.8
HanXRQChr03g0089621 Helianthus annuus HOM05D006103 ORTHO05D007468 1.4e-86 323.9 310 60.6
CiPaw.11G084400 Carya illinoinensis HOM05D006103 ORTHO05D007468 2.3e-86 323.2 323 58.5
MD04G1054200 Malus domestica HOM05D006103 ORTHO05D007468 2.3e-86 323.2 337 55.8
Sp2g11900 Schrenkiella parvula HOM05D006103 ORTHO05D007468 8.8e-86 321.2 309 60.8
MELO3C013891.2 Cucumis melo HOM05D006103 ORTHO05D007468 1.1e-85 320.9 340 57.4
BraA02t08094Z Brassica rapa HOM05D006103 ORTHO05D007468 1.5e-85 320.5 306 61.1
C02p48360 Brassica napus HOM05D006103 ORTHO05D007468 2.0e-85 320.1 304 61.5
BolC2t10867H Brassica oleracea HOM05D006103 ORTHO05D007468 2.0e-85 320.1 304 61.5
BcaC03g16934 Brassica carinata HOM05D006103 ORTHO05D007468 4.4e-85 318.9 306 61.1
Eucgr.E00334 Eucalyptus grandis HOM05D006103 ORTHO05D007468 5.7e-85 318.5 340 55.9
MBI04_g46823_MAGBIO Magnolia biondii HOM05D006103 ORTHO05D007468 1.3e-84 317.4 302 61.6
TWI60G1123 Tripterygium wilfordii HOM05D006103 ORTHO05D007468 1.3e-84 317.4 310 60.0
A02p30800 Brassica napus HOM05D006103 ORTHO05D007468 1.7e-84 317.0 306 60.5
Phvul.003G226000 Phaseolus vulgaris HOM05D006103 ORTHO05D007468 2.8e-84 316.2 325 57.8
Sed0003222 Sechium edule HOM05D006103 ORTHO05D007468 1.4e-83 313.9 335 57.3
AUR62007192 Chenopodium quinoa HOM05D006103 ORTHO05D007468 2.4e-83 313.2 310 55.8
Lalb_Chr16g0386381 Lupinus albus HOM05D006103 ORTHO05D007468 2.4e-83 313.2 317 57.7
Thhalv10000969m.g Eutrema salsugineum HOM05D006103 ORTHO05D007468 3.1e-83 312.8 306 59.8
Lj4g0004061 Lotus japonicus HOM05D006103 ORTHO05D007468 4.1e-83 312.4 330 57.3
AL8G11110 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 9.1e-83 311.2 307 59.6
Aqoxy3G02600 Aquilegia oxysepala HOM05D006103 ORTHO05D007468 1.5e-82 310.5 307 58.6
C02p28550 Brassica napus HOM05D006103 ORTHO05D007468 1.7e-81 307.0 313 55.0
BolC2t08897H Brassica oleracea HOM05D006103 ORTHO05D007468 1.7e-81 307.0 313 55.0
AT5G47090 Arabidopsis thaliana HOM05D006103 ORTHO05D007468 2.9e-81 306.2 311 54.7
CDE02G1890 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 3.8e-81 305.8 315 56.8
Medtr4g099190 Medicago truncatula HOM05D006103 ORTHO05D007468 1.1e-80 304.3 331 54.7
BcaC03g15262 Brassica carinata HOM05D006103 ORTHO05D007468 1.4e-80 303.9 313 54.6
Ca_22022_v3 Cicer arietinum L. HOM05D006103 ORTHO05D007468 1.4e-80 303.9 313 55.9
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 4.2e-80 302.4 290 54.8
vmacro00388 Vaccinium macrocarpon HOM05D006103 ORTHO05D007468 9.4e-80 301.2 401 45.9
Peaxi162Scf00190g00616 Petunia axillaris HOM05D006103 ORTHO05D007468 1.1e-75 287.7 269 63.9
Hund11307 Selenicereus undatus HOM05D006103 ORTHO05D007468 3.1e-75 286.2 260 62.7
Aa31LG9G5870 Aethionema arabicum HOM05D006103 ORTHO05D007468 1.2e-74 284.3 361 51.0
Rhsim04G0176100 Rhododendron simsii HOM05D006103 ORTHO05D007468 2.9e-73 279.6 263 63.1
Dinv28889 Davidia involucrata HOM05D006103 ORTHO05D007468 5.0e-73 278.9 200 69.0
SEGI_16450 Sequoiadendron giganteum HOM05D006103 ORTHO05D007468 6.5e-73 278.5 305 55.1
ATR0665G401 Amborella trichopoda HOM05D006103 ORTHO05D007468 1.5e-72 277.3 304 53.6
SHI07660 Sapria himalayana HOM05D006103 ORTHO05D007468 3.2e-72 276.2 310 51.0
EL10Ac5g12236 Beta vulgaris HOM05D006103 ORTHO05D007468 1.2e-71 274.2 324 54.6
Sc22g0001160 Simmondsia chinensis HOM05D006103 ORTHO05D007468 6.7e-70 268.5 198 68.2
GSVIVG01013285001 Vitis vinifera HOM05D006103 ORTHO05D007468 1.2e-69 267.7 198 67.7
CDE11G0859 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 2.0e-69 266.9 257 60.3
Zm00001eb377550 Zea mays HOM05D006103 ORTHO05D007468 2.6e-69 266.5 320 51.2
CANSAT21G0160 Cannabis sativa HOM05D001479 ORTHO05D007468 4.8e-68 262.3 189 66.7
CANSAT21G1035 Cannabis sativa HOM05D006103 ORTHO05D007468 4.8e-68 262.3 189 66.7
Os06g0139700 Oryza sativa ssp. japonica HOM05D006103 ORTHO05D007468 6.3e-68 261.9 316 50.9
BcaC07g39778 Brassica carinata HOM05D006103 ORTHO05D007468 5.0e-65 252.3 306 53.6
Psat4g074520 Pisum sativum HOM05D006103 ORTHO05D007468 6.5e-65 251.9 310 46.5
Nitab4.5_0013289g0030 Nicotiana tabacum HOM05D006103 ORTHO05D007468 1.1e-64 251.1 237 65.8
TPR.G25737 Trifolium pratense HOM05D006103 ORTHO05D007468 8.8e-62 241.5 335 47.5
Pp3c16_2730 Physcomitrium patens HOM05D006103 ORTHO05D007468 5.5e-56 222.2 328 45.1
HPP92_014398 Vanilla planifolia HOM05D006103 ORTHO05D007468 3.0e-54 216.5 189 55.6
Hma1.2p1_1672F.1_g296810 Hydrangea macrophylla HOM05D006103 ORTHO05D007468 7.5e-53 211.8 215 60.5
AUR62018811 Chenopodium quinoa HOM05D006103 ORTHO05D007468 1.3e-49 201.1 201 55.2
BolC8t50609H Brassica oleracea HOM05D006103 ORTHO05D007468 2.5e-48 196.8 159 62.9
SMO171G0121 Selaginella moellendorffii HOM05D006103 ORTHO05D007468 5.2e-46 189.1 310 40.6
AagrBONN_evm.TU.Sc2ySwM_368.2081 Anthoceros agrestis HOM05D006103 ORTHO05D007468 9.8e-45 184.9 306 41.5
Lj8A284T15 Lonicera japonica HOM05D006103 ORTHO05D007468 2.7e-42 176.8 138 63.0
C08p30000 Brassica napus HOM05D006103 ORTHO05D007468 2.3e-41 173.7 145 61.4
CBR_g49667 Chara braunii HOM05D006103 ORTHO05D007468 1.9e-40 170.6 415 34.9
AL8G11000 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 3.7e-28 129.8 155 58.1
MCO11G792 Micromonas commoda HOM05D006103 ORTHO05D007468 5.1e-25 119.4 345 27.8
SHI06573 Sapria himalayana HOM05D006103 ORTHO05D007468 6.2e-23 112.5 129 48.8
Actinidia02205 Actinidia chinensis HOM05D006103 ORTHO05D007468 1.8e-22 110.9 69 76.8
Lj8A284T12 Lonicera japonica HOM05D006103 ORTHO05D007468 1.1e-19 101.7 141 41.8
Cfa012348 Carpinus fangiana HOM05D006103 ORTHO05D007468 8.7e-17 92.0 76 61.8
SHI06574 Sapria himalayana HOM05D006103 ORTHO05D007468 1.5e-16 91.3 147 42.2
Lj8C284T4 Lonicera japonica HOM05D006103 ORTHO05D007468 1.9e-16 90.9 57 70.2
RcHm_v2.0_Chr4g0446321 Rosa chinensis HOM05D006103 ORTHO05D007468 1.9e-16 90.9 186 33.9
COL.COLO4_06694 Corchorus olitorius HOM05D006103 ORTHO05D007468 3.3e-16 90.1 66 66.7
Cre03.g170100 Chlamydomonas reinhardtii HOM05D006103 ORTHO05D007468 5.6e-16 89.4 151 39.1
RcHm_v2.0_Chr6g0308851 Rosa chinensis HOM05D006103 ORTHO05D007468 3.8e-12 76.6 52 71.2
Actinidia25920 Actinidia chinensis HOM05D006103 ORTHO05D007468 1.9e-11 74.3 76 52.6
CARHR174410 Cardamine hirsuta HOM05D006103 ORTHO05D007468 2.4e-11 73.9 48 68.8
Carub.0008s0069 Capsella rubella HOM05D006103 ORTHO05D007468 7.8e-10 68.9 51 62.7
Lj8A280T20 Lonicera japonica HOM05D006103 ORTHO05D007468 9.6e-08 62.0 48 62.5
Rhsim04G0176300 Rhododendron simsii HOM05D006103 ORTHO05D007468 3.1e-06 57.0 64 50.0


User provided reference genes

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