Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 1.1e-246 856.3 473 100.0
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 4.7e-152 542.0 505 57.4
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 7.5e-150 534.6 472 59.1
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 2.8e-149 532.7 485 57.1
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 3.1e-148 529.3 499 56.7
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 7.0e-148 528.1 506 54.3
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 9.1e-148 527.7 480 59.2
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 3.8e-146 522.3 473 58.8
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 1.1e-145 520.8 307 78.8
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 5.5e-145 518.5 303 79.9
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 2.7e-144 516.2 481 61.3
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 1.4e-143 513.8 483 56.5
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 6.8e-143 511.5 482 56.4
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 8.8e-143 511.1 495 56.0
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 8.8e-143 511.1 497 57.5
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 1.2e-142 510.8 478 57.3
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 2.0e-142 510.0 489 57.3
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 5.7e-142 508.4 498 54.0
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 2.2e-141 506.5 488 55.5
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 4.8e-141 505.4 478 57.3
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 8.3e-141 504.6 475 56.2
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 3.1e-140 502.7 304 78.0
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 4.1e-140 502.3 479 56.8
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 5.4e-140 501.9 475 55.4
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 9.1e-140 501.1 303 77.2
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 1.2e-139 500.7 477 57.4
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 3.5e-139 499.2 491 55.2
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 4.5e-139 498.8 494 55.3
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 4.5e-139 498.8 498 51.6
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 5.9e-139 498.4 478 57.7
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 5.9e-139 498.4 480 56.0
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 5.9e-139 498.4 476 58.2
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 5.9e-139 498.4 477 54.9
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 1.3e-138 497.3 496 53.8
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 1.7e-138 496.9 486 54.3
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 1.7e-138 496.9 497 53.1
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 2.3e-138 496.5 511 52.8
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 2.9e-138 496.1 477 54.5
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 3.8e-138 495.7 484 54.3
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 1.9e-137 493.4 498 51.2
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 3.3e-137 492.7 304 75.0
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 3.3e-137 492.7 304 74.3
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 3.3e-137 492.7 479 56.8
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 9.5e-137 491.1 478 53.8
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 9.5e-137 491.1 474 59.9
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 2.8e-136 489.6 304 72.4
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 3.6e-136 489.2 498 51.0
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 4.7e-136 488.8 484 56.4
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 6.1e-136 488.4 498 51.0
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 8.0e-136 488.0 481 55.1
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 8.0e-136 488.0 475 56.2
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 1.4e-135 487.3 479 55.7
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 1.8e-135 486.9 506 51.4
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 2.3e-135 486.5 485 54.6
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 2.3e-135 486.5 302 75.2
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 5.2e-135 485.3 479 54.1
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 5.2e-135 485.3 480 54.2
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 6.8e-135 485.0 485 52.4
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 4.4e-134 482.3 479 57.6
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 5.7e-134 481.9 504 56.3
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 7.5e-134 481.5 295 76.3
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 9.8e-134 481.1 506 50.8
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 2.2e-133 479.9 489 52.4
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 4.9e-133 478.8 311 72.7
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 6.3e-133 478.4 304 72.7
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 8.3e-133 478.0 479 57.0
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 1.4e-132 477.2 481 53.0
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 1.8e-132 476.9 299 73.2
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 3.1e-132 476.1 484 52.1
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 5.4e-132 475.3 301 74.4
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 1.6e-131 473.8 300 72.7
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 1.7e-130 470.3 482 52.3
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 2.9e-130 469.5 310 69.4
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 5.0e-130 468.8 305 69.2
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 1.9e-129 466.8 397 57.9
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 7.3e-129 464.9 302 69.5
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 1.2e-128 464.2 308 70.1
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 8.0e-128 461.5 310 68.1
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 1.8e-127 460.3 308 68.8
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 7.5e-126 454.9 509 51.9
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 9.8e-126 454.5 483 51.6
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 1.4e-124 450.7 487 50.7
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 1.8e-124 450.3 477 50.9
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 3.0e-122 443.0 486 52.5
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 3.9e-122 442.6 477 53.5
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 7.3e-121 438.3 295 70.5
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 2.8e-120 436.4 408 53.7
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 2.4e-116 423.3 272 73.2
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 4.1e-116 422.5 552 44.0
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 1.7e-109 400.6 302 64.2
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 3.0e-106 389.8 230 80.0
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 8.6e-106 388.3 300 60.3
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 8.6e-106 388.3 300 60.3
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.9e-105 387.1 424 55.0
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 2.8e-104 383.3 297 60.3
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 6.2e-104 382.1 220 82.3
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 1.5e-102 377.5 268 66.4
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.3e-101 374.4 301 60.1
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 2.1e-99 367.1 303 58.4
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.1e-97 361.3 408 54.2
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 2.6e-94 350.1 308 56.5
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 4.0e-87 326.2 408 45.1
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 2.2e-85 320.5 396 45.7
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 6.0e-83 312.4 203 72.9
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 5.6e-81 305.8 374 51.9
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 8.1e-80 302.0 301 51.5
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 1.7e-69 267.7 205 62.0
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 1.7e-69 267.7 205 62.0
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 4.6e-67 259.6 268 47.4
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 1.7e-61 241.1 276 41.7
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 4.2e-60 236.5 154 70.1
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 1.1e-57 228.4 120 85.0
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 2.5e-44 184.1 209 46.4
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 2.2e-37 161.0 131 58.0
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 4.4e-33 146.7 124 55.6
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 1.1e-31 142.1 296 35.1
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 1.2e-30 138.7 78 75.6
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 5.0e-29 133.3 69 91.3
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 6.8e-26 122.9 90 55.6
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 1.8e-23 114.8 68 75.0
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 1.7e-21 108.2 74 67.6
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 5.9e-14 83.2 52 75.0
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.6e-11 75.1 122 32.8
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 6.1e-11 73.2 72 45.8
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 3.2e-07 60.8 41 63.4
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.2e-06 58.9 59 40.7


User provided reference genes

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