Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 9.9e-203 709.9 363 100.0
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 2.4e-116 422.9 365 62.7
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 3.2e-116 422.5 365 62.7
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 5.2e-111 405.2 366 62.6
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 4.6e-107 392.1 375 59.2
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 7.1e-100 368.2 377 56.0
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 6.6e-98 361.7 373 52.8
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 1.5e-94 350.5 373 53.4
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 2.2e-93 346.7 368 51.6
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 3.5e-91 339.3 349 52.1
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 3.0e-90 336.3 349 52.1
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 2.5e-89 333.2 364 53.3
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 2.8e-88 329.7 343 53.6
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 4.9e-85 318.9 369 51.2
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 1.9e-84 317.0 349 51.3
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 1.0e-82 311.2 352 48.9
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 1.3e-82 310.8 371 48.8
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 1.3e-82 310.8 375 50.9
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 1.8e-82 310.5 345 50.4
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 1.5e-81 307.4 376 49.5
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 1.5e-81 307.4 368 49.2
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 2.5e-81 306.6 356 47.8
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 4.3e-81 305.8 376 48.7
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 2.8e-80 303.1 378 47.9
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 4.8e-80 302.4 380 48.7
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 6.2e-80 302.0 372 49.5
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 8.2e-80 301.6 367 49.6
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.4e-79 300.8 345 51.0
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 1.8e-79 300.4 368 48.9
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 2.4e-79 300.1 363 48.2
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 5.3e-79 298.9 382 48.2
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 9.0e-79 298.1 345 50.7
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 4.5e-78 295.8 373 48.0
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 5.8e-78 295.4 373 47.7
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 2.2e-77 293.5 353 49.6
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.2e-77 293.5 345 50.1
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 3.8e-77 292.7 355 49.0
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.1e-75 287.0 365 47.9
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 2.1e-75 287.0 372 47.6
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.7e-75 286.6 364 47.8
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 4.6e-75 285.8 348 47.4
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 4.6e-75 285.8 348 48.9
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 6.0e-75 285.4 426 43.2
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 6.0e-75 285.4 348 47.1
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 7.9e-75 285.0 364 47.5
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.3e-74 283.5 349 46.7
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 5.1e-74 282.3 382 45.8
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 1.5e-73 280.8 347 48.4
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 4.3e-73 279.3 345 47.5
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 4.3e-73 279.3 343 49.0
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 7.4e-73 278.5 357 49.0
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 1.3e-72 277.7 374 46.8
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 2.2e-72 276.9 372 46.2
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 2.2e-72 276.9 347 47.0
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 3.7e-72 276.2 344 48.5
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 4.8e-72 275.8 362 45.9
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 1.1e-71 274.6 370 45.7
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 1.1e-71 274.6 369 48.2
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 1.1e-71 274.6 392 48.0
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 1.4e-71 274.2 346 48.6
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 1.2e-70 271.2 360 46.4
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 2.0e-70 270.4 363 45.7
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 2.0e-70 270.4 363 45.7
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 2.6e-70 270.0 413 42.4
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 2.6e-70 270.0 342 47.4
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 2.2e-69 266.9 382 44.2
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 1.1e-68 264.6 375 45.3
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 3.2e-68 263.1 373 46.6
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 7.2e-68 261.9 354 46.6
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 9.4e-68 261.5 373 42.6
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 9.4e-68 261.5 360 45.8
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 7.9e-67 258.5 412 43.9
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 3.3e-65 253.1 343 45.8
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 4.8e-64 249.2 354 44.6
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 1.4e-63 247.7 439 40.3
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 3.4e-62 243.0 313 46.6
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 1.7e-61 240.7 360 41.1
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 3.8e-61 239.6 395 43.0
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 3.2e-60 236.5 343 44.9
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 5.5e-60 235.7 273 51.3
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 2.1e-59 233.8 164 73.2
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 1.1e-57 228.0 375 42.4
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 1.5e-57 227.6 376 41.8
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 1.7e-56 224.2 365 40.5
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 1.7e-56 224.2 317 44.8
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 1.7e-56 224.2 366 41.5
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 1.1e-55 221.5 331 43.5
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 1.1e-55 221.5 304 46.1
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 2.4e-55 220.3 299 45.8
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 2.4e-55 220.3 310 44.5
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 5.3e-55 219.2 300 41.7
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 4.2e-52 209.5 271 46.9
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 5.5e-52 209.1 377 38.7
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 9.4e-52 208.4 372 40.3
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 9.4e-52 208.4 372 40.3
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 2.1e-51 207.2 361 39.3
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 8.0e-51 205.3 329 42.9
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 8.0e-51 205.3 384 39.1
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 3.0e-50 203.4 366 37.4
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 3.9e-50 203.0 310 44.5
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 2.2e-48 197.2 366 38.8
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 3.1e-47 193.4 366 38.0
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 3.5e-46 189.9 286 41.3
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 4.7e-43 179.5 316 39.6
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 6.1e-43 179.1 270 44.4
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 5.2e-42 176.0 384 36.5
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 2.0e-41 174.1 313 39.9
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 2.0e-41 174.1 313 39.9
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 2.0e-41 174.1 313 39.9
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 5.7e-41 172.6 316 38.9
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 2.2e-40 170.6 310 40.0
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 3.1e-39 166.8 317 38.2
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 3.1e-39 166.8 317 38.2
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 3.8e-37 159.8 351 37.3
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 7.2e-36 155.6 404 32.4
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 1.7e-21 107.8 319 31.0
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 3.6e-19 100.1 158 45.6
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 8.9e-18 95.5 368 26.4
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 7.5e-17 92.4 94 54.3
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 1.9e-15 87.8 268 26.9
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 2.3e-13 80.9 357 25.8
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 2.3e-13 80.9 220 28.6
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 5.6e-12 76.3 70 55.7
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 4.7e-11 73.2 64 56.2
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 9.8e-09 65.5 73 50.7
SMO347G0210 Selaginella moellendorffii HOM05D005771 ORTHO05D007173 2.7e-06 57.4 245 24.5


User provided reference genes

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