Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09207 Striga asiatica HOM05D007827 ORTHO05D009749 2.9e-70 268.5 137 100.0
Migut.A00115 Erythranthe guttata HOM05D007827 ORTHO05D009749 6.3e-17 91.3 71 66.2
SalBow4G1896 Salvia bowleyana HOM05D007827 ORTHO05D009749 6.3e-17 91.3 146 43.2
Actinidia01227 Actinidia chinensis HOM05D007827 ORTHO05D009749 5.3e-16 88.2 142 45.8
unitig_37.g12945 Utricularia gibba HOM05D007827 ORTHO05D009749 4.5e-15 85.1 94 47.9
CSS0026056 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.3e-14 83.6 100 53.0
Nitab4.5_0000972g0020 Nicotiana tabacum HOM05D007827 ORTHO05D009749 2.9e-14 82.4 87 51.7
Hma1.2p1_0801F.1_g220250 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 1.9e-13 79.7 106 49.1
Oeu047101.1 Olea europaea HOM05D007827 ORTHO05D009749 1.9e-13 79.7 54 74.1
Hma1.2p1_1933F.1_g308040 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 2.5e-13 79.3 51 76.5
CSS0004361 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 7.2e-13 77.8 114 45.6
Dinv28003 Davidia involucrata HOM05D007827 ORTHO05D009749 7.2e-13 77.8 47 80.9
Cc08_g10870 Coffea canephora HOM05D007827 ORTHO05D009749 9.4e-13 77.4 164 40.9
Lsat_1_v5_gn_6_13921 Lactuca sativa HOM05D007827 ORTHO05D009749 1.2e-12 77.0 114 45.6
Atru.chr7.1942 Acer truncatum HOM05D007827 ORTHO05D009749 2.1e-12 76.3 58 70.7
Peaxi162Scf00297g00062 Petunia axillaris HOM05D007827 ORTHO05D009749 2.1e-12 76.3 108 45.4
CAN.G130.10 Capsicum annuum HOM05D007827 ORTHO05D009749 2.7e-12 75.9 123 42.3
Nitab4.5_0007177g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 3.6e-12 75.5 98 41.8
Solyc06g011440.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 3.6e-12 75.5 148 41.9
PGSC0003DMG400029878 Solanum tuberosum HOM05D007827 ORTHO05D009749 6.1e-12 74.7 96 44.8
CSS0031213 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.0e-11 73.9 140 42.9
PGSC0003DMG400008199 Solanum tuberosum HOM05D007827 ORTHO05D009749 1.0e-11 73.9 99 47.5
Sopen06g006480 Solanum pennellii HOM05D007827 ORTHO05D009749 1.4e-11 73.6 148 41.2
Solyc08g062840.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 1.8e-11 73.2 99 47.5
Sopen08g018370 Solanum pennellii HOM05D007827 ORTHO05D009749 1.8e-11 73.2 99 47.5
Peaxi162Scf01001g00001 Petunia axillaris HOM05D007827 ORTHO05D009749 2.3e-11 72.8 112 44.6
Oeu018628.1 Olea europaea HOM05D007827 ORTHO05D009749 3.0e-11 72.4 166 39.8
Nitab4.5_0007037g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 5.2e-11 71.6 119 42.9
Rhsim11G0042400 Rhododendron simsii HOM05D007827 ORTHO05D009749 6.8e-11 71.2 143 37.1
SGA_v2.0_scaffold169G38700 Striga asiatica HOM05D007827 ORTHO05D009749 8.8e-11 70.9 44 68.2
Nitab4.5_0002039g0090 Nicotiana tabacum HOM05D007827 ORTHO05D009749 2.0e-10 69.7 119 42.0
CSS0037057 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 3.4e-10 68.9 115 42.6
CiPaw.16G027300 Carya illinoinensis HOM05D007827 ORTHO05D009749 9.8e-10 67.4 98 44.9
ATR0789G035 Amborella trichopoda HOM05D007827 ORTHO05D009749 1.7e-09 66.6 80 48.8
MELO3C011460.2 Cucumis melo HOM05D007827 ORTHO05D009749 2.8e-09 65.9 68 51.5
Potri.006G226200 Populus trichocarpa HOM05D007827 ORTHO05D009749 8.3e-09 64.3 55 56.4
ECA240G3049 Erigeron canadensis HOM05D007827 ORTHO05D009749 2.4e-08 62.8 107 37.4
TAR626G1076 Trochodendron aralioides HOM05D007827 ORTHO05D009749 3.1e-08 62.4 53 58.5
Manes.16G082000 Manihot esculenta HOM05D007827 ORTHO05D009749 4.1e-08 62.0 59 52.5
MD15G1056900 Malus domestica HOM05D007827 ORTHO05D009749 7.0e-08 61.2 131 40.5
FAN24G3029 Fragaria x ananassa HOM05D007827 ORTHO05D009749 1.6e-07 60.1 106 38.7
Sabra06G0174900 Salix brachista HOM05D007827 ORTHO05D009749 1.6e-07 60.1 164 31.7
Thecc.09G056900 Theobroma cacao HOM05D007827 ORTHO05D009749 1.6e-07 60.1 75 42.7
Cpa.g.sc7.157 Carica papaya HOM05D007827 ORTHO05D009749 2.0e-07 59.7 126 38.1
Haze_18158 Corylus avellana HOM05D007827 ORTHO05D009749 2.0e-07 59.7 125 36.8
FvH4_2g31620 Fragaria vesca HOM05D007827 ORTHO05D009749 2.7e-07 59.3 106 39.6
Psat6g021400 Pisum sativum HOM05D007827 ORTHO05D009749 2.7e-07 59.3 59 54.2
Glyma.04G052400 Glycine max HOM05D007827 ORTHO05D009749 3.5e-07 58.9 56 60.7
DCAR_003136 Daucus carota HOM05D007827 ORTHO05D009749 4.5e-07 58.5 140 32.1
FAN27G2967 Fragaria x ananassa HOM05D007827 ORTHO05D009749 4.5e-07 58.5 106 38.7
Sed0025262 Sechium edule HOM05D007827 ORTHO05D009749 5.9e-07 58.2 92 42.4
ClCG08G010040 Citrullus lanatus HOM05D007827 ORTHO05D009749 1.3e-06 57.0 118 39.0
HPP92_009146 Vanilla planifolia HOM05D007827 ORTHO05D009749 1.7e-06 56.6 131 33.6
Medtr3g104620 Medicago truncatula HOM05D007827 ORTHO05D009749 2.3e-06 56.2 60 48.3
Aqoxy7G01166 Aquilegia oxysepala HOM05D007827 ORTHO05D009749 3.8e-06 55.5 132 37.1
FAN15G3566 Fragaria x ananassa HOM05D007827 ORTHO05D009749 3.8e-06 55.5 106 36.8
Lj1g0018619 Lotus japonicus HOM05D007827 ORTHO05D009749 3.8e-06 55.5 65 47.7
CsaV3_6G032200 Cucumis sativus L. HOM05D007827 ORTHO05D009749 5.0e-06 55.1 118 35.6
RcHm_v2.0_Chr6g0311201 Rosa chinensis HOM05D007827 ORTHO05D009749 6.6e-06 54.7 108 35.2
Sed0014394 Sechium edule HOM05D007827 ORTHO05D009749 6.6e-06 54.7 114 37.7
arahy.Tifrunner.gnm1.ann1.WVJ8VS Arachis hypogaea HOM05D007827 ORTHO05D009749 8.6e-06 54.3 115 36.5


User provided reference genes

Program Settings