Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09204 Striga asiatica HOM05D005314 ORTHO05D006522 2.0e-256 888.6 464 100.0
Migut.A00114 Erythranthe guttata HOM05D005314 ORTHO05D006522 4.3e-158 562.0 392 78.1
SalBow4G3021 Salvia bowleyana HOM05D005314 ORTHO05D006522 5.4e-153 545.0 392 75.5
MSTRG.25961 Avicennia marina HOM05D005314 ORTHO05D006522 1.2e-152 543.9 392 75.3
Dinv22878 Davidia involucrata HOM05D005314 ORTHO05D006522 4.7e-149 531.9 391 73.1
Cc08_g10890 Coffea canephora HOM05D005314 ORTHO05D006522 6.8e-148 528.1 388 72.7
Actinidia30326 Actinidia chinensis HOM05D005314 ORTHO05D006522 8.9e-148 527.7 393 72.5
Cfa017974 Carpinus fangiana HOM05D005314 ORTHO05D006522 2.0e-147 526.6 392 70.7
Haze_18156 Corylus avellana HOM05D005314 ORTHO05D006522 2.6e-147 526.2 392 71.2
TAR369G0158 Trochodendron aralioides HOM05D005314 ORTHO05D006522 7.6e-147 524.6 392 71.4
TAR636G1106 Trochodendron aralioides HOM05D005314 ORTHO05D006522 7.6e-147 524.6 392 71.4
CSS0005464 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 2.9e-146 522.7 393 72.5
Sopen06g012940 Solanum pennellii HOM05D005314 ORTHO05D006522 2.9e-146 522.7 392 72.4
ECA233G4949 Erigeron canadensis HOM05D005314 ORTHO05D006522 3.8e-146 522.3 388 72.7
Prupe.1G409300 Prunus persica HOM05D005314 ORTHO05D006522 3.8e-146 522.3 392 71.4
Solyc06g036780.3 Solanum lycopersicum HOM05D005314 ORTHO05D006522 3.8e-146 522.3 392 72.4
CAN.G130.11 Capsicum annuum HOM05D005314 ORTHO05D006522 6.4e-146 521.5 392 72.2
QL02p000736 Quercus lobata HOM05D005314 ORTHO05D006522 8.4e-146 521.2 391 71.1
Nn8g38796 Nelumbo nucifera HOM05D005314 ORTHO05D006522 1.2e-144 517.3 398 69.1
MD15G1056700 Malus domestica HOM05D005314 ORTHO05D006522 4.6e-144 515.4 388 70.4
Hma1.2p1_0544F.1_g175630 Hydrangea macrophylla HOM05D005314 ORTHO05D006522 7.8e-144 514.6 391 71.4
Eucgr.C03058 Eucalyptus grandis HOM05D005314 ORTHO05D006522 5.1e-143 511.9 392 70.2
CiPaw.16G027100 Carya illinoinensis HOM05D005314 ORTHO05D006522 1.5e-142 510.4 392 69.4
GSVIVG01035376001 Vitis vinifera HOM05D005314 ORTHO05D006522 1.5e-142 510.4 395 70.9
CiPaw.15G037000 Carya illinoinensis HOM05D005314 ORTHO05D006522 1.9e-142 510.0 392 69.1
AUR62009122 Chenopodium quinoa HOM05D005314 ORTHO05D006522 7.3e-142 508.1 390 69.5
PSO210G6435 Papaver somniferum HOM05D005314 ORTHO05D006522 7.3e-142 508.1 385 69.6
CANSAT25G2280 Cannabis sativa HOM05D005314 ORTHO05D006522 9.6e-142 507.7 388 71.1
Thecc.09G057100 Theobroma cacao HOM05D005314 ORTHO05D006522 9.6e-142 507.7 392 68.9
MD08G1064900 Malus domestica HOM05D005314 ORTHO05D006522 1.3e-141 507.3 388 69.3
FvH4_2g31600 Fragaria vesca HOM05D005314 ORTHO05D006522 3.6e-141 505.8 388 70.9
Manes.03G050000 Manihot esculenta HOM05D005314 ORTHO05D006522 3.6e-141 505.8 392 69.1
PSO210G6321 Papaver somniferum HOM05D005314 ORTHO05D006522 4.8e-141 505.4 385 69.4
Rhsim11G0042200 Rhododendron simsii HOM05D005314 ORTHO05D006522 4.8e-141 505.4 399 71.2
Lsat_1_v5_gn_6_14601 Lactuca sativa HOM05D005314 ORTHO05D006522 6.2e-141 505.0 388 70.9
RcHm_v2.0_Chr6g0311221 Rosa chinensis HOM05D005314 ORTHO05D006522 6.2e-141 505.0 388 70.9
Potri.018G060500 Populus trichocarpa HOM05D005314 ORTHO05D006522 1.1e-140 504.2 392 69.9
Gorai.013G220600 Gossypium raimondii HOM05D005314 ORTHO05D006522 1.8e-140 503.4 392 68.1
Gohir.D13G194600 Gossypium hirsutum HOM05D005314 ORTHO05D006522 2.4e-140 503.1 392 68.1
COL.COLO4_21084 Corchorus olitorius HOM05D005314 ORTHO05D006522 5.3e-140 501.9 391 69.1
HanXRQChr08g0226511 Helianthus annuus HOM05D005314 ORTHO05D006522 2.0e-139 500.0 388 70.6
Potri.006G226000 Populus trichocarpa HOM05D005314 ORTHO05D006522 4.4e-139 498.8 391 69.6
PGR044G2019 Punica granatum HOM05D005314 ORTHO05D006522 4.4e-139 498.8 393 68.2
TWI34G0632 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 4.4e-139 498.8 392 69.1
Gohir.A13G187700 Gossypium hirsutum HOM05D005314 ORTHO05D006522 7.6e-139 498.0 392 67.6
BolC9t59318H Brassica oleracea HOM05D005314 ORTHO05D006522 9.9e-139 497.7 392 67.9
Aqoxy7G04033 Aquilegia oxysepala HOM05D000411 ORTHO05D006522 2.2e-138 496.5 385 68.6
CsaV3_4G035770 Cucumis sativus L. HOM05D005314 ORTHO05D006522 2.2e-138 496.5 392 67.6
BraA10t44644Z Brassica rapa HOM05D005314 ORTHO05D006522 6.4e-138 495.0 392 68.1
BcaNung02637 Brassica carinata HOM05D005314 ORTHO05D006522 8.4e-138 494.6 392 66.8
C09p64870 Brassica napus HOM05D005314 ORTHO05D006522 8.4e-138 494.6 392 67.6
Peaxi162Scf01088g00005 Petunia axillaris HOM05D005314 ORTHO05D006522 1.9e-137 493.4 372 71.5
A10p25800 Brassica napus HOM05D005314 ORTHO05D006522 2.4e-137 493.0 392 67.1
Gorai.001G022500 Gossypium raimondii HOM05D005314 ORTHO05D006522 3.2e-137 492.7 392 67.1
Sp6g31630 Schrenkiella parvula HOM05D005314 ORTHO05D006522 3.2e-137 492.7 392 67.3
TWI32G0330 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 3.2e-137 492.7 392 68.9
Gohir.A07G021950 Gossypium hirsutum HOM05D005314 ORTHO05D006522 5.4e-137 491.9 392 66.8
THA.LOC104811236 Tarenaya hassleriana HOM05D005314 ORTHO05D006522 1.2e-136 490.7 392 67.1
Thhalv10014010m.g Eutrema salsugineum HOM05D005314 ORTHO05D006522 2.7e-136 489.6 392 66.8
A02p01290 Brassica napus HOM05D005314 ORTHO05D006522 3.5e-136 489.2 392 66.6
BraA02t05108Z Brassica rapa HOM05D005314 ORTHO05D006522 3.5e-136 489.2 392 66.6
BcaC03g13403 Brassica carinata HOM05D005314 ORTHO05D006522 1.0e-135 487.6 392 66.3
C02p05500 Brassica napus HOM05D005314 ORTHO05D006522 1.0e-135 487.6 392 66.3
BolC2t06496H Brassica oleracea HOM05D005314 ORTHO05D006522 1.0e-135 487.6 392 66.3
Sed0001440 Sechium edule HOM05D005314 ORTHO05D006522 1.3e-135 487.3 392 67.3
AT5G11960 Arabidopsis thaliana HOM05D005314 ORTHO05D006522 1.7e-135 486.9 392 66.3
Aa31LG3G15270 Aethionema arabicum HOM05D005314 ORTHO05D006522 2.3e-135 486.5 392 66.8
AL6G22740 Arabidopsis lyrata HOM05D005314 ORTHO05D006522 3.0e-135 486.1 392 66.6
Carub.0006s1050 Capsella rubella HOM05D005314 ORTHO05D006522 5.1e-135 485.3 392 66.3
ClCG05G017990 Citrullus lanatus HOM05D005314 ORTHO05D006522 6.6e-135 485.0 391 67.0
Ca_13152_v3 Cicer arietinum L. HOM05D005314 ORTHO05D006522 8.7e-135 484.6 392 68.4
FAN27G1630 Fragaria x ananassa HOM05D005314 ORTHO05D006522 4.3e-134 482.3 395 67.8
Glyma.06G053100 Glycine max HOM05D005314 ORTHO05D006522 3.6e-133 479.2 388 66.8
Lj1g0000731 Lotus japonicus HOM05D005314 ORTHO05D006522 1.8e-132 476.9 392 64.5
Psat6g021480 Pisum sativum HOM05D005314 ORTHO05D006522 1.8e-132 476.9 392 67.6
Hund19438 Selenicereus undatus HOM05D005314 ORTHO05D006522 5.3e-132 475.3 390 66.9
TPR.G13039 Trifolium pratense HOM05D005314 ORTHO05D006522 1.5e-131 473.8 394 66.2
ATR0789G137 Amborella trichopoda HOM05D005314 ORTHO05D006522 2.6e-131 473.0 392 64.3
MELO3C016882.2 Cucumis melo HOM05D005314 ORTHO05D006522 9.9e-131 471.1 392 65.3
Medtr1g015820 Medicago truncatula HOM05D005314 ORTHO05D006522 1.3e-130 470.7 394 66.2
Ciclev10008891m.g Citrus clementina HOM05D005314 ORTHO05D006522 4.9e-130 468.8 380 66.1
Phvul.009G078900 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 8.4e-130 468.0 383 64.5
Phvul.001G037500 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 1.9e-129 466.8 392 65.1
Lalb_Chr11g0063171 Lupinus albus HOM05D005314 ORTHO05D006522 4.2e-129 465.7 392 64.8
Glyma.14G097400 Glycine max HOM05D005314 ORTHO05D006522 7.1e-129 464.9 398 64.8
Sabra18G0054400 Salix brachista HOM05D005314 ORTHO05D006522 2.1e-128 463.4 448 60.0
CDE06G1634 Ceratophyllum demersum HOM05D005314 ORTHO05D006522 4.3e-126 455.7 388 64.2
VMungo0647G2045 Vigna mungo HOM05D005314 ORTHO05D006522 1.6e-125 453.8 405 63.0
DCAR_007733 Daucus carota HOM05D005314 ORTHO05D006522 2.1e-125 453.4 397 64.7
Lalb_Chr22g0356141 Lupinus albus HOM05D005314 ORTHO05D006522 2.2e-122 443.4 357 65.3
FAN15G2750 Fragaria x ananassa HOM05D005314 ORTHO05D006522 4.9e-122 442.2 356 68.5
VMungo1309G2963 Vigna mungo HOM05D005314 ORTHO05D006522 8.4e-122 441.4 383 62.7
FAN24G2134 Fragaria x ananassa HOM05D005314 ORTHO05D006522 1.9e-121 440.3 351 68.9
Atru.chr7.1939 Acer truncatum HOM05D005314 ORTHO05D006522 2.5e-121 439.9 319 72.4
MBI01_g21122_MAGBIO Magnolia biondii HOM05D005314 ORTHO05D006522 5.1e-119 432.2 383 62.1
HPP92_007653 Vanilla planifolia HOM05D005314 ORTHO05D006522 1.9e-118 430.3 386 60.1
Lj8A530G14 Lonicera japonica HOM05D005314 ORTHO05D006522 6.3e-117 425.2 342 70.2
Oeu003996.1 Olea europaea HOM05D005314 ORTHO05D006522 1.1e-116 424.5 360 66.7
Lalb_Chr14g0366381 Lupinus albus HOM05D005314 ORTHO05D006522 1.5e-115 420.6 319 68.3
Glyma.04G052700 Glycine max HOM05D005314 ORTHO05D006522 2.9e-114 416.4 355 63.9
Sabra06G0174700 Salix brachista HOM05D005314 ORTHO05D006522 2.9e-114 416.4 435 56.1
arahy.Tifrunner.gnm1.ann1.VQ1HGR Arachis hypogaea HOM05D005314 ORTHO05D006522 3.5e-112 409.5 392 60.7
Glyma.17G227100 Glycine max HOM05D005314 ORTHO05D006522 1.3e-111 407.5 392 59.9
unitig_88.g27677 Utricularia gibba HOM05D005314 ORTHO05D006522 2.3e-111 406.8 406 57.6
Sc23g0005690 Simmondsia chinensis HOM05D005314 ORTHO05D006522 5.1e-111 405.6 390 59.0
vmacro00123 Vaccinium macrocarpon HOM05D005314 ORTHO05D006522 1.9e-110 403.7 329 68.4
arahy.Tifrunner.gnm1.ann1.UTD444 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.3e-106 391.0 388 58.2
arahy.Tifrunner.gnm1.ann1.GAY7D4 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.9e-105 387.1 388 57.7
Dinv28005 Davidia involucrata HOM05D005314 ORTHO05D006522 4.1e-100 369.4 269 72.1
EL10Ac2g03829 Beta vulgaris HOM05D005314 ORTHO05D006522 2.7e-96 356.7 390 54.1
Nitab4.5_0000972g0030 Nicotiana tabacum HOM05D005314 ORTHO05D006522 6.1e-96 355.5 435 52.4
Duzib150G1607 Durio zibethinus HOM05D005314 ORTHO05D006522 1.4e-95 354.4 269 68.4
Nitab4.5_0000268g0140 Nicotiana tabacum HOM05D005314 ORTHO05D006522 3.6e-88 329.7 410 50.7
Sed0024799 Sechium edule HOM05D005314 ORTHO05D006522 6.1e-88 328.9 297 62.3
arahy.Tifrunner.gnm1.ann1.6D5JL1 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.0e-87 328.2 392 52.6
Gohir.D07G021900 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.7e-82 310.8 251 65.7
Mapoly0049s0128 Marchantia polymorpha HOM05D005314 ORTHO05D006522 9.1e-76 288.5 389 45.0
Ah.10g034130 Amaranthus hybridus HOM05D005314 ORTHO05D006522 2.0e-75 287.3 203 75.4
CARHR201170 Cardamine hirsuta HOM05D005314 ORTHO05D006522 9.5e-73 278.5 202 71.8
Zm00001eb155260 Zea mays HOM05D005314 ORTHO05D006522 9.8e-70 268.5 296 52.7
MD11G1243300 Malus domestica HOM05D005314 ORTHO05D006522 4.1e-68 263.1 216 64.8
Pp3c7_50 Physcomitrium patens HOM05D005314 ORTHO05D006522 9.8e-62 241.9 351 39.0
Hund03325 Selenicereus undatus HOM05D005314 ORTHO05D006522 1.5e-57 228.0 299 47.8
Cpa.g.sc7.160 Carica papaya HOM05D005314 ORTHO05D006522 3.4e-54 216.9 144 76.4
Os01g0708300 Oryza sativa ssp. japonica HOM05D005314 ORTHO05D006522 5.8e-54 216.1 144 70.8
Lj7A260G18 Lonicera japonica HOM05D005314 ORTHO05D006522 6.4e-53 212.6 282 49.3
Cpa.g.sc7.159 Carica papaya HOM05D005314 ORTHO05D006522 3.2e-52 210.3 165 70.3
CBR_g50008 Chara braunii HOM05D005314 ORTHO05D006522 1.5e-49 201.4 347 38.3
CSS0003098 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 1.3e-45 188.3 110 88.2
RcHm_v2.0_Chr1g0383701 Rosa chinensis HOM05D005314 ORTHO05D006522 2.9e-45 187.2 241 45.2
AUR62039137 Chenopodium quinoa HOM05D005314 ORTHO05D006522 1.4e-44 184.9 131 73.3
arahy.Tifrunner.gnm1.ann1.IMU44M Arachis hypogaea HOM05D005314 ORTHO05D006522 1.7e-42 177.9 184 59.2
Cre10.g419700 Chlamydomonas reinhardtii HOM05D005314 ORTHO05D006522 5.6e-41 172.9 336 34.8
PRCOL_00001271 Prasinoderma coloniale HOM05D005314 ORTHO05D006522 5.6e-41 172.9 327 32.7
PGSC0003DMG400031356 Solanum tuberosum HOM05D005314 ORTHO05D006522 4.4e-38 163.3 124 74.2
MCO12G408 Micromonas commoda HOM05D005314 ORTHO05D006522 1.6e-35 154.8 333 33.0
Oeu040341.1 Olea europaea HOM05D005314 ORTHO05D006522 7.1e-28 129.4 74 86.5
BcaB03g16563 Brassica carinata HOM05D005314 ORTHO05D006522 1.6e-27 128.3 113 61.1
CSS0034519 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 4.5e-22 110.2 95 68.4
arahy.Tifrunner.gnm1.ann1.TY68CU Arachis hypogaea HOM05D005314 ORTHO05D005864 7.1e-20 102.8 106 63.2
Gohir.D07G021800 Gossypium hirsutum HOM05D005314 ORTHO05D006522 7.1e-20 102.8 95 60.0
SEGI_34785 Sequoiadendron giganteum HOM05D005314 ORTHO05D006522 4.6e-19 100.1 73 64.4


User provided reference genes

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