Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09181 Striga asiatica HOM05D008470 ORTHO05D010644 1.2e-199 700.3 540 100.0
Migut.A00093 Erythranthe guttata HOM05D008470 ORTHO05D010644 1.1e-80 305.1 559 62.8
SalBow4G1486 Salvia bowleyana HOM05D008470 ORTHO05D010644 1.8e-70 271.2 519 64.2
Cc08_g01370 Coffea canephora HOM05D008470 ORTHO05D010644 1.2e-42 178.7 223 47.5
Haze_18132 Corylus avellana HOM05D008470 ORTHO05D010644 3.9e-38 163.7 206 46.1
MD08G1069300 Malus domestica HOM05D008470 ORTHO05D010644 1.4e-35 155.2 206 44.7
Prupe.1G406700 Prunus persica HOM05D008470 ORTHO05D010644 1.4e-35 155.2 206 44.2
RcHm_v2.0_Chr6g0311521 Rosa chinensis HOM05D008470 ORTHO05D010644 4.1e-35 153.7 200 45.5
TAR636G2211 Trochodendron aralioides HOM05D008470 ORTHO05D010644 7.0e-35 152.9 212 43.9
Ciclev10007870m.g Citrus clementina HOM05D008470 ORTHO05D010644 2.6e-34 151.0 552 52.5
Potri.006G223300 Populus trichocarpa HOM05D008470 ORTHO05D010644 2.6e-34 151.0 224 42.4
AUR62009098 Chenopodium quinoa HOM05D008470 ORTHO05D010644 3.5e-34 150.6 235 39.6
Duzib187G1003 Durio zibethinus HOM05D008470 ORTHO05D010644 5.9e-34 149.8 176 47.2
Phvul.009G080600 Phaseolus vulgaris HOM05D008470 ORTHO05D010644 3.8e-33 147.1 206 40.8
Lsat_1_v5_gn_8_99341 Lactuca sativa HOM05D008470 ORTHO05D010644 5.0e-33 146.7 229 40.6
Sabra06G0172500 Salix brachista HOM05D008470 ORTHO05D010644 5.0e-33 146.7 213 42.3
VMungo1309G2203 Vigna mungo HOM05D008470 ORTHO05D010644 1.1e-32 145.6 208 41.8
Glyma.04G054900 Glycine max HOM05D008470 ORTHO05D010644 2.5e-32 144.4 206 42.2
Nn8g38729 Nelumbo nucifera HOM05D008470 ORTHO05D010644 2.5e-32 144.4 210 42.4
Atru.chr7.1873 Acer truncatum HOM05D008470 ORTHO05D010644 3.2e-32 144.1 222 39.6
Manes.03G052100 Manihot esculenta HOM05D008470 ORTHO05D010644 4.2e-32 143.7 210 41.4
Thecc.09G060200 Theobroma cacao HOM05D008470 ORTHO05D010644 4.2e-32 143.7 203 42.4
HanXRQChr06g0182651 Helianthus annuus HOM05D008470 ORTHO05D010644 1.6e-31 141.7 221 38.5
Lj1g0027273 Lotus japonicus HOM05D008470 ORTHO05D010644 1.6e-31 141.7 202 42.6
arahy.Tifrunner.gnm1.ann1.JJ1EFU Arachis hypogaea HOM05D008470 ORTHO05D010644 3.6e-31 140.6 537 51.0
AUR62020574 Chenopodium quinoa HOM05D008470 ORTHO05D010644 6.1e-31 139.8 225 39.6
arahy.Tifrunner.gnm1.ann1.5BA5FJ Arachis hypogaea HOM05D008470 ORTHO05D010644 1.0e-30 139.0 211 39.8
Ah.10g034010 Amaranthus hybridus HOM05D008470 ORTHO05D010644 1.8e-30 138.3 197 41.6
MD15G1052800 Malus domestica HOM05D008470 ORTHO05D010644 8.8e-30 136.0 204 39.7
COL.COLO4_03754 Corchorus olitorius HOM05D008470 ORTHO05D010644 1.5e-29 135.2 216 38.4
Gorai.001G021200 Gossypium raimondii HOM05D008470 ORTHO05D010644 6.3e-28 129.8 210 38.6
Aqoxy1G00269 Aquilegia oxysepala HOM05D008470 ORTHO05D010644 7.0e-27 126.3 167 41.3
ATR0598G005 Amborella trichopoda HOM05D008470 ORTHO05D010644 5.0e-25 120.2 202 38.1
CDE04G2722 Ceratophyllum demersum HOM05D008470 ORTHO05D010644 8.5e-25 119.4 217 39.6
Oeu047081.1 Olea europaea HOM05D008470 ORTHO05D010644 9.4e-24 115.9 390 63.3
THA.LOC109115989 Tarenaya hassleriana HOM05D008470 ORTHO05D010644 1.8e-22 111.7 197 39.1
Gohir.D07G020400 Gossypium hirsutum HOM05D008470 ORTHO05D010644 4.4e-21 107.1 517 34.8
Gohir.A07G020700 Gossypium hirsutum HOM05D008470 ORTHO05D010644 2.0e-18 98.2 116 48.3
FvH4_6g18940 Fragaria vesca HOM05D008470 ORTHO05D010644 6.8e-14 83.2 117 36.8
Lj7P234T13 Lonicera japonica HOM05D008470 ORTHO05D010644 3.4e-13 80.9 107 38.3
Potri.018G050100 Populus trichocarpa HOM05D002542 ORTHO05D010145 4.4e-13 80.5 216 33.3
Lj7P240T22 Lonicera japonica HOM05D008470 ORTHO05D010644 7.5e-13 79.7 108 37.0
FvH4_6g18941 Fragaria vesca HOM05D008470 ORTHO05D010644 1.8e-11 75.1 58 56.9
Dinv05110 Davidia involucrata HOM05D008470 ORTHO05D010644 4.1e-11 73.9 58 62.1
Duzib168G2087 Durio zibethinus HOM05D008470 ORTHO05D010644 1.3e-09 68.9 108 32.4
Lj7P240T28 Lonicera japonica HOM05D008470 ORTHO05D010644 2.5e-08 64.7 58 56.9
Lj7P235T14 Lonicera japonica HOM05D008470 ORTHO05D010644 9.5e-08 62.8 57 57.9
C04p46110 Brassica napus HOM05D006858 ORTHO05D008767 3.6e-07 60.8 93 34.4
BolC4t26195H Brassica oleracea HOM05D006858 ORTHO05D008767 3.6e-07 60.8 93 34.4
SGA_v2.0_scaffold79G25581 Striga asiatica HOM05D000424 ORTHO05D000355 3.6e-07 60.8 77 44.2
Zm00001eb376700 Zea mays HOM05D006858 ORTHO05D008767 8.0e-07 59.7 100 30.0
DCAR_022059 Daucus carota HOM05D006858 ORTHO05D008767 1.0e-06 59.3 93 33.3
AT5G39710 Arabidopsis thaliana HOM05D006858 ORTHO05D008767 1.4e-06 58.9 93 34.4
BcaB06g27362 Brassica carinata HOM05D006858 ORTHO05D008767 1.8e-06 58.5 94 36.2
Aqoxy6G01416 Aquilegia oxysepala HOM05D006858 ORTHO05D008767 2.3e-06 58.2 99 29.3
Os06g0152500 Oryza sativa ssp. japonica HOM05D006858 ORTHO05D008767 4.0e-06 57.4 100 31.0
Oeu013687.1 Olea europaea HOM05D006858 ORTHO05D008767 5.2e-06 57.0 93 32.3
Sp7g02300 Schrenkiella parvula HOM05D006858 ORTHO05D008767 6.8e-06 56.6 93 32.3


User provided reference genes

Program Settings