Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09163 Striga asiatica HOM05D007323 ORTHO05D009238 1.2e-130 469.9 245 100.0
Migut.A00078 Erythranthe guttata HOM05D007323 ORTHO05D009238 3.2e-88 328.9 235 72.8
MSTRG.25986 Avicennia marina HOM05D007323 ORTHO05D009238 4.4e-85 318.5 239 71.5
Dinv41843 Davidia involucrata HOM05D007323 ORTHO05D009238 5.5e-72 275.0 235 61.7
unitig_8.g4975 Utricularia gibba HOM05D007323 ORTHO05D009238 9.4e-72 274.2 209 68.9
Nn8g38659 Nelumbo nucifera HOM05D007323 ORTHO05D009238 2.3e-70 269.6 206 66.0
Lsat_1_v5_gn_5_79461 Lactuca sativa HOM05D007323 ORTHO05D009238 8.8e-70 267.7 213 64.3
Sopen08g017220 Solanum pennellii HOM05D007323 ORTHO05D009238 8.8e-70 267.7 221 62.0
Thecc.09G063400 Theobroma cacao HOM05D007323 ORTHO05D009238 8.8e-70 267.7 224 62.9
Actinidia03545 Actinidia chinensis HOM05D007323 ORTHO05D009238 4.4e-69 265.4 205 64.9
Cc08_g01150 Coffea canephora HOM05D007323 ORTHO05D009238 4.4e-69 265.4 234 62.0
Nitab4.5_0002831g0040 Nicotiana tabacum HOM05D007323 ORTHO05D009238 2.2e-68 263.1 221 62.9
HanXRQChr10g0309971 Helianthus annuus HOM05D007323 ORTHO05D009238 8.2e-68 261.2 244 59.0
COL.COLO4_21139 Corchorus olitorius HOM05D007323 ORTHO05D009238 1.8e-67 260.0 216 63.0
Nitab4.5_0000446g0180 Nicotiana tabacum HOM05D007323 ORTHO05D009238 3.1e-67 259.2 245 59.2
Manes.16G085700 Manihot esculenta HOM05D007323 ORTHO05D009238 4.1e-67 258.8 227 61.7
ECA234G0604 Erigeron canadensis HOM05D007323 ORTHO05D009238 7.0e-67 258.1 246 58.9
Duzib150G1239 Durio zibethinus HOM05D007323 ORTHO05D009238 2.2e-65 253.1 243 56.8
Lalb_Chr08g0244811 Lupinus albus HOM05D007323 ORTHO05D009238 2.2e-65 253.1 206 64.1
Ciclev10009314m.g Citrus clementina HOM05D007323 ORTHO05D009238 5.5e-64 248.4 251 56.6
Gorai.001G020100 Gossypium raimondii HOM05D007323 ORTHO05D009238 5.5e-64 248.4 224 62.1
Sed0017686 Sechium edule HOM05D007323 ORTHO05D009238 1.6e-63 246.9 205 63.9
GSVIVG01035470001 Vitis vinifera HOM05D007323 ORTHO05D009238 1.6e-63 246.9 183 66.1
MELO3C011483.2 Cucumis melo HOM05D007323 ORTHO05D009238 2.1e-63 246.5 247 57.1
Glyma.06G055900 Glycine max HOM05D007323 ORTHO05D009238 2.7e-63 246.1 206 64.1
PGR031G0894 Punica granatum HOM05D007323 ORTHO05D009238 2.7e-63 246.1 248 58.1
Rhsim10G0107900 Rhododendron simsii HOM05D007323 ORTHO05D009238 2.7e-63 246.1 172 70.3
Ca_15835_v3 Cicer arietinum L. HOM05D007323 ORTHO05D009238 3.6e-63 245.7 205 64.4
CsaV3_6G031970 Cucumis sativus L. HOM05D007323 ORTHO05D009238 6.1e-63 245.0 245 55.9
ClCG08G009880 Citrullus lanatus HOM05D007323 ORTHO05D009238 8.0e-63 244.6 246 56.9
Sabra06G0170600 Salix brachista HOM05D007323 ORTHO05D009238 3.0e-62 242.7 193 65.8
CANSAT25G3877 Cannabis sativa HOM05D007323 ORTHO05D009238 6.8e-62 241.5 193 65.8
CiPaw.16G068300 Carya illinoinensis HOM05D007323 ORTHO05D009238 6.8e-62 241.5 205 62.9
Gohir.D07G019400 Gossypium hirsutum HOM05D007323 ORTHO05D009238 8.8e-62 241.1 224 61.2
Potri.006G220800 Populus trichocarpa HOM05D007323 ORTHO05D009238 8.8e-62 241.1 245 55.9
vmacro05236 Vaccinium macrocarpon HOM05D007323 ORTHO05D009238 8.8e-62 241.1 203 60.1
Cfa017873 Carpinus fangiana HOM05D007323 ORTHO05D009238 4.4e-61 238.8 205 62.4
TWI34G0887 Tripterygium wilfordii HOM05D007323 ORTHO05D009238 4.4e-61 238.8 205 60.5
Eucgr.B01965 Eucalyptus grandis HOM05D007323 ORTHO05D009238 5.7e-61 238.4 194 63.9
Lj1g0021270 Lotus japonicus HOM05D007323 ORTHO05D009238 3.7e-60 235.7 204 61.8
Sc06g0001110 Simmondsia chinensis HOM05D007323 ORTHO05D009238 1.1e-59 234.2 227 55.5
DCAR_007767 Daucus carota HOM05D007323 ORTHO05D009238 1.4e-59 233.8 227 55.9
Phvul.009G082000 Phaseolus vulgaris HOM05D007323 ORTHO05D009238 1.8e-59 233.4 207 61.4
QL02p017014 Quercus lobata HOM05D007323 ORTHO05D009238 1.8e-59 233.4 195 62.1
VMungo1309G0522 Vigna mungo HOM05D007323 ORTHO05D009238 2.4e-59 233.0 207 60.9
Atru.chr7.1847 Acer truncatum HOM05D007323 ORTHO05D009238 4.1e-59 232.3 172 66.9
RcHm_v2.0_Chr6g0311811 Rosa chinensis HOM05D007323 ORTHO05D009238 5.4e-59 231.9 247 53.8
Aqoxy7G01049 Aquilegia oxysepala HOM05D007323 ORTHO05D009238 9.1e-59 231.1 208 60.1
PSO421G0353 Papaver somniferum HOM05D007323 ORTHO05D009238 9.1e-59 231.1 211 58.3
FvH4_2g30980 Fragaria vesca HOM05D007323 ORTHO05D009238 1.6e-58 230.3 206 60.7
FAN20G2477 Fragaria x ananassa HOM05D007323 ORTHO05D009238 3.5e-58 229.2 240 56.2
TPR.G3557 Trifolium pratense HOM05D007323 ORTHO05D009238 4.5e-58 228.8 213 58.7
FAN24G0989 Fragaria x ananassa HOM05D007323 ORTHO05D009238 5.9e-58 228.4 206 60.2
FAN27G1709 Fragaria x ananassa HOM05D007323 ORTHO05D009238 7.7e-58 228.0 234 56.0
Medtr3g105050 Medicago truncatula HOM05D007323 ORTHO05D009238 7.7e-58 228.0 229 55.9
CDE05G0862 Ceratophyllum demersum HOM05D007323 ORTHO05D009238 1.7e-57 226.9 210 58.1
Hund03297 Selenicereus undatus HOM05D007323 ORTHO05D009238 1.7e-57 226.9 204 58.8
EL10Ac2g03780 Beta vulgaris HOM05D007323 ORTHO05D009238 2.9e-57 226.1 203 59.1
MD15G1049800 Malus domestica HOM05D007323 ORTHO05D009238 1.9e-56 223.4 240 56.2
PSO063G6894 Papaver somniferum HOM05D007323 ORTHO05D009238 2.5e-56 223.0 211 56.4
Gohir.A07G019600 Gossypium hirsutum HOM05D007323 ORTHO05D009238 5.5e-56 221.9 201 60.7
arahy.Tifrunner.gnm1.ann1.7DEW7H Arachis hypogaea HOM05D007323 ORTHO05D009238 9.5e-56 221.1 228 54.4
Prupe.1G404100 Prunus persica HOM05D007323 ORTHO05D009238 1.2e-55 220.7 207 59.9
HPP92_024332 Vanilla planifolia HOM05D007323 ORTHO05D009238 2.8e-55 219.5 192 60.9
Haze_18294 Corylus avellana HOM05D007323 ORTHO05D009238 1.4e-54 217.2 297 47.5
THA.LOC104819519 Tarenaya hassleriana HOM05D007323 ORTHO05D009238 1.4e-54 217.2 203 56.2
ATR0598G133 Amborella trichopoda HOM05D007323 ORTHO05D009238 4.0e-54 215.7 175 64.0
Thhalv10002091m.g Eutrema salsugineum HOM05D007323 ORTHO05D009238 8.8e-54 214.5 213 55.4
AL4G18960 Arabidopsis lyrata HOM05D007323 ORTHO05D009238 2.6e-53 213.0 196 57.7
A09p55240 Brassica napus HOM05D007323 ORTHO05D009238 3.4e-53 212.6 211 54.5
BcaC07g40825 Brassica carinata HOM05D007323 ORTHO05D009238 4.4e-53 212.2 194 56.7
C08p38170 Brassica napus HOM05D007323 ORTHO05D009238 4.4e-53 212.2 194 56.7
BolC8t51392H Brassica oleracea HOM05D007323 ORTHO05D009238 4.4e-53 212.2 194 56.7
BraA09t40931Z Brassica rapa HOM05D007323 ORTHO05D009238 9.8e-53 211.1 196 56.6
BcaB08g35255 Brassica carinata HOM05D007323 ORTHO05D009238 1.3e-52 210.7 194 57.7
Sp4g06990 Schrenkiella parvula HOM05D007323 ORTHO05D009238 1.7e-52 210.3 196 57.1
Carub.0004s0625 Capsella rubella HOM05D007323 ORTHO05D009238 8.3e-52 208.0 194 55.7
arahy.Tifrunner.gnm1.ann1.287SRD Arachis hypogaea HOM05D007323 ORTHO05D009238 1.1e-51 207.6 236 53.8
Os03g0176700 Oryza sativa ssp. japonica HOM05D007323 ORTHO05D009238 1.0e-49 201.1 194 55.2
Aa31LG2G12250 Aethionema arabicum HOM05D007323 ORTHO05D009238 2.3e-49 199.9 210 52.9
AUR62009079 Chenopodium quinoa HOM05D007323 ORTHO05D009238 6.6e-49 198.4 162 63.6
CARHR118450 Cardamine hirsuta HOM05D007323 ORTHO05D009238 9.5e-48 194.5 178 57.3
Peaxi162Scf00486g01025 Petunia axillaris HOM05D007323 ORTHO05D009238 1.6e-47 193.7 245 47.8
SEGI_00918 Sequoiadendron giganteum HOM05D007323 ORTHO05D009238 1.6e-47 193.7 212 52.4
AT2G26340 Arabidopsis thaliana HOM05D007323 ORTHO05D009238 4.7e-47 192.2 198 54.5
Zm00001eb005760 Zea mays HOM05D007323 ORTHO05D009238 8.9e-46 188.0 173 57.8
A09p54710 Brassica napus HOM05D007323 ORTHO05D009238 1.2e-45 187.6 168 57.7
Psat5g030560 Pisum sativum HOM05D007323 ORTHO05D009238 2.6e-45 186.4 162 61.7
AUR62020587 Chenopodium quinoa HOM05D007323 ORTHO05D009238 1.0e-41 174.5 242 45.9
Pp3c4_13280 Physcomitrium patens HOM05D007323 ORTHO05D009238 1.3e-41 174.1 184 50.0
Eucgr.B01870 Eucalyptus grandis HOM05D007323 ORTHO05D009238 3.0e-41 172.9 135 66.7
AagrBONN_evm.TU.Sc2ySwM_228.4439 Anthoceros agrestis HOM05D007323 ORTHO05D009238 5.0e-41 172.2 182 51.1
TAR636G1368 Trochodendron aralioides HOM05D007323 ORTHO05D009238 1.9e-40 170.2 164 54.9
SMO239G0030 Selaginella moellendorffii HOM05D007323 ORTHO05D009238 3.1e-38 162.9 213 46.0
Mapoly0001s0019 Marchantia polymorpha HOM05D007323 ORTHO05D009238 7.0e-35 151.8 170 48.2
MBI13_g42814_MAGBIO Magnolia biondii HOM05D007323 ORTHO05D009238 3.9e-33 146.0 330 35.5
CSS0001075 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 1.1e-30 137.9 104 66.3
CSS0018719 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 1.1e-30 137.9 104 66.3
CBR_g19268 Chara braunii HOM05D007323 ORTHO05D009238 2.2e-28 130.2 142 47.2
Cpa.g.sc126.24 Carica papaya HOM05D007323 ORTHO05D009238 1.9e-27 127.1 104 65.4
MD08G1071400 Malus domestica HOM05D007323 ORTHO05D009238 7.3e-16 88.6 64 71.9
Solyc08g061800.3 Solanum lycopersicum HOM05D007323 ORTHO05D009238 1.4e-14 84.3 85 52.9
Cre16.g684150 Chlamydomonas reinhardtii HOM05D007323 ORTHO05D009238 2.4e-14 83.6 169 32.5
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 1.8e-06 57.4 141 29.1


User provided reference genes

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