Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09144 Striga asiatica HOM05D002238 ORTHO05D007272 7.6e-258 893.3 435 100.0
Migut.A00055 Erythranthe guttata HOM05D002238 ORTHO05D007272 1.9e-139 500.0 411 60.8
Oeu034743.2 Olea europaea HOM05D002238 ORTHO05D007272 2.4e-134 483.0 438 58.7
Cc08_g00970 Coffea canephora HOM05D002238 ORTHO05D007272 2.5e-128 463.0 432 53.7
unitig_32.g11479 Utricularia gibba HOM05D002238 ORTHO05D007272 7.9e-122 441.4 382 56.3
Dinv30168 Davidia involucrata HOM05D002238 ORTHO05D007272 1.0e-121 441.0 436 54.1
Peaxi162Scf00327g00039 Petunia axillaris HOM05D002238 ORTHO05D007272 6.3e-119 431.8 434 50.9
Nitab4.5_0004440g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.1e-118 431.0 388 55.2
Rhsim09G0014000 Rhododendron simsii HOM05D002238 ORTHO05D007272 5.9e-117 425.2 435 51.5
Nitab4.5_0009247g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 2.5e-115 419.9 368 56.0
PGSC0003DMG400020787 Solanum tuberosum HOM05D002238 ORTHO05D007272 7.2e-115 418.3 385 54.0
Haze_00046 Corylus avellana HOM05D002238 ORTHO05D007272 9.4e-115 417.9 437 49.7
Duzib168G0728 Durio zibethinus HOM05D002238 ORTHO05D007272 1.6e-114 417.2 434 51.6
CSS0032500 Camellia sinensis var. sinensis HOM05D002238 ORTHO05D007272 2.7e-114 416.4 437 50.8
Rhsim02G0195500 Rhododendron simsii HOM05D002238 ORTHO05D007272 4.6e-114 415.6 437 50.6
Lj8C25T21 Lonicera japonica HOM05D002238 ORTHO05D007272 6.7e-113 411.8 435 50.1
TWI32G0967 Tripterygium wilfordii HOM05D002238 ORTHO05D007272 1.5e-112 410.6 436 49.3
Manes.16G120100 Manihot esculenta HOM05D002238 ORTHO05D007272 2.0e-112 410.2 428 50.5
Prupe.1G474900 Prunus persica HOM05D002238 ORTHO05D007272 7.4e-112 408.3 438 46.8
QL09p012798 Quercus lobata HOM05D002238 ORTHO05D007272 1.3e-111 407.5 435 49.0
Rhsim02G0198300 Rhododendron simsii HOM05D002238 ORTHO05D007272 1.3e-111 407.5 437 49.7
Ciclev10010344m.g Citrus clementina HOM05D002238 ORTHO05D007272 2.2e-111 406.8 436 49.5
Sopen08g016790 Solanum pennellii HOM05D002238 ORTHO05D007272 3.7e-111 406.0 385 53.0
Solyc08g061450.3 Solanum lycopersicum HOM05D002238 ORTHO05D007272 4.8e-111 405.6 385 52.7
Actinidia13250 Actinidia chinensis HOM05D002238 ORTHO05D007272 8.2e-111 404.8 389 53.0
Gohir.A09G019700 Gossypium hirsutum HOM05D002238 ORTHO05D007272 1.4e-110 404.1 434 49.3
Sc11g0007780 Simmondsia chinensis HOM05D002238 ORTHO05D007272 2.4e-110 403.3 432 48.4
COL.COLO4_00195 Corchorus olitorius HOM05D002238 ORTHO05D007272 5.3e-110 402.1 434 48.4
Peaxi162Scf00108g00063 Petunia axillaris HOM05D002238 ORTHO05D007272 5.3e-110 402.1 433 49.0
TAR625G0243 Trochodendron aralioides HOM05D002238 ORTHO05D007272 1.5e-109 400.6 420 49.0
Gohir.1Z049673 Gossypium hirsutum HOM05D002238 ORTHO05D007272 2.0e-109 400.2 434 49.3
Gohir.D09G019000 Gossypium hirsutum HOM05D002238 ORTHO05D007272 2.0e-109 400.2 434 49.3
Gorai.006G022700 Gossypium raimondii HOM05D002238 ORTHO05D007272 2.0e-109 400.2 434 49.5
FAN24G3345 Fragaria x ananassa HOM05D002238 ORTHO05D007272 2.6e-109 399.8 416 49.3
FvH4_2g29530 Fragaria vesca HOM05D002238 ORTHO05D007272 1.3e-108 397.5 430 47.7
Thecc.09G149800 Theobroma cacao HOM05D002238 ORTHO05D007272 2.2e-108 396.7 374 52.1
RcHm_v2.0_Chr6g0298391 Rosa chinensis HOM05D002238 ORTHO05D007272 3.8e-108 396.0 427 48.0
MD08G1146200 Malus domestica HOM05D002238 ORTHO05D007272 5.0e-108 395.6 438 46.8
FAN27G0629 Fragaria x ananassa HOM05D002238 ORTHO05D007272 8.5e-108 394.8 430 47.4
FAN20G0928 Fragaria x ananassa HOM05D002238 ORTHO05D007272 1.4e-107 394.0 430 47.4
Nn2g11964 Nelumbo nucifera HOM05D002238 ORTHO05D007272 3.2e-107 392.9 393 50.6
CiPaw.05G262300 Carya illinoinensis HOM05D002238 ORTHO05D007272 2.7e-106 389.8 438 47.5
ClCG05G017070 Citrullus lanatus HOM05D002238 ORTHO05D007272 2.7e-106 389.8 420 47.6
MBI04_g24206_MAGBIO Magnolia biondii HOM05D002238 ORTHO05D007272 3.6e-106 389.4 392 50.3
Aqoxy3G03159 Aquilegia oxysepala HOM05D002238 ORTHO05D007272 4.7e-106 389.0 436 45.9
Glyma.05G173000 Glycine max HOM05D002238 ORTHO05D007272 6.1e-106 388.7 390 50.0
VMungo1215G1712 Vigna mungo HOM05D002238 ORTHO05D007272 1.4e-105 387.5 387 49.1
Lalb_Chr25g0279781 Lupinus albus HOM05D002238 ORTHO05D007272 1.8e-105 387.1 388 52.3
Potri.006G251400 Populus trichocarpa HOM05D002238 ORTHO05D007272 5.1e-105 385.6 438 46.8
PGR042G2797 Punica granatum HOM05D002238 ORTHO05D007272 5.1e-105 385.6 391 50.1
Sed0000756 Sechium edule HOM05D002238 ORTHO05D007272 5.1e-105 385.6 439 46.7
Lj5g0011751 Lotus japonicus HOM05D002238 ORTHO05D007272 6.7e-105 385.2 382 50.0
Eucgr.C01786 Eucalyptus grandis HOM05D002238 ORTHO05D007272 2.6e-104 383.3 390 50.5
DCAR_006233 Daucus carota HOM05D002238 ORTHO05D007272 4.4e-104 382.5 365 53.7
Medtr1g031820 Medicago truncatula HOM05D002238 ORTHO05D001984 7.4e-104 381.7 382 50.0
Peaxi162Scf00002g00372 Petunia axillaris HOM05D002238 ORTHO05D003453 9.7e-104 381.3 371 53.4
CANSAT54G2252 Cannabis sativa HOM05D002238 ORTHO05D007272 6.3e-103 378.6 436 47.7
Ca_12577_v3 Cicer arietinum L. HOM05D002238 ORTHO05D007272 7.0e-102 375.2 387 48.1
TPR.G36878 Trifolium pratense HOM05D002238 ORTHO05D001984 2.6e-101 373.2 380 48.9
Cfa016290 Carpinus fangiana HOM05D002238 ORTHO05D007272 7.7e-101 371.7 393 48.9
EL10Ac2g04715 Beta vulgaris HOM05D002238 ORTHO05D007272 2.2e-100 370.2 440 47.3
Cpa.g.sc533.2 Carica papaya HOM05D002238 ORTHO05D007272 6.5e-100 368.6 387 49.4
CsaV3_3G046550 Cucumis sativus L. HOM05D002238 ORTHO05D007272 6.5e-100 368.6 391 47.6
AUR62040710 Chenopodium quinoa HOM05D002238 ORTHO05D007272 1.5e-99 367.5 440 46.8
MELO3C003684.2 Cucumis melo HOM05D002238 ORTHO05D007272 2.5e-99 366.7 400 47.0
Ah.16g102520 Amaranthus hybridus HOM05D002238 ORTHO05D007272 7.2e-99 365.2 420 47.9
AUR62012126 Chenopodium quinoa HOM05D002238 ORTHO05D007272 1.2e-98 364.4 387 50.4
PSO349G0250 Papaver somniferum HOM05D002238 ORTHO05D007272 8.8e-97 358.2 393 48.6
Sabra06G0196500 Salix brachista HOM05D002238 ORTHO05D007272 8.8e-97 358.2 436 45.6
Lsat_1_v5_gn_5_105001 Lactuca sativa HOM05D002238 ORTHO05D007272 1.5e-96 357.5 439 46.7
arahy.Tifrunner.gnm1.ann1.U1RD55 Arachis hypogaea HOM05D002238 ORTHO05D007272 2.6e-96 356.7 359 50.7
Psat6g044800 Pisum sativum HOM05D002238 ORTHO05D001984 5.7e-96 355.5 411 44.5
PSO017G3814 Papaver somniferum HOM05D002238 ORTHO05D007272 1.3e-95 354.4 394 48.2
Phvul.003G021200 Phaseolus vulgaris HOM05D002238 ORTHO05D007272 4.8e-95 352.4 367 47.7
Peaxi162Scf00108g00056 Petunia axillaris HOM05D002238 ORTHO05D007272 4.1e-94 349.4 392 47.4
arahy.Tifrunner.gnm1.ann1.TBR9XZ Arachis hypogaea HOM05D002238 ORTHO05D007272 2.9e-92 343.2 353 49.3
arahy.Tifrunner.gnm1.ann1.V2KEMD Arachis hypogaea HOM05D002238 ORTHO05D007272 6.5e-92 342.0 360 49.4
arahy.Tifrunner.gnm1.ann1.BAI8MS Arachis hypogaea HOM05D002238 ORTHO05D007272 9.4e-91 338.2 351 49.9
arahy.Tifrunner.gnm1.ann1.H3G4DQ Arachis hypogaea HOM05D002238 ORTHO05D007272 9.4e-91 338.2 352 50.0
arahy.Tifrunner.gnm1.ann1.NZP3ZD Arachis hypogaea HOM05D002238 ORTHO05D007272 2.7e-90 336.7 348 50.3
Aa31LG11G4600 Aethionema arabicum HOM05D002238 ORTHO05D007272 4.7e-90 335.9 438 43.4
HanXRQChr13g0402681 Helianthus annuus HOM05D002238 ORTHO05D007272 6.1e-90 335.5 384 47.7
AL6G37300 Arabidopsis lyrata HOM05D002238 ORTHO05D007272 6.8e-89 332.0 390 45.4
Carub.0006s2336 Capsella rubella HOM05D002238 ORTHO05D007272 2.6e-88 330.1 435 42.5
AT5G25500 Arabidopsis thaliana HOM05D002238 ORTHO05D007272 5.7e-88 328.9 390 45.6
HPP92_000893 Vanilla planifolia HOM05D002238 ORTHO05D007272 2.2e-87 327.0 387 45.0
C07p42320 Brassica napus HOM05D002238 ORTHO05D007272 3.7e-87 326.2 393 45.8
Sp2g22030 Schrenkiella parvula HOM05D002238 ORTHO05D007272 3.7e-87 326.2 438 42.7
arahy.Tifrunner.gnm1.ann1.Z0G856 Arachis hypogaea HOM05D002238 ORTHO05D007272 4.8e-87 325.9 402 45.3
BolC7t44761H Brassica oleracea HOM05D002238 ORTHO05D007272 6.3e-87 325.5 393 45.8
Thhalv10005310m.g Eutrema salsugineum HOM05D002238 ORTHO05D007272 8.3e-87 325.1 393 45.3
THA.LOC104810431 Tarenaya hassleriana HOM05D002238 ORTHO05D007272 2.4e-86 323.6 393 44.3
CARHR187880 Cardamine hirsuta HOM05D002238 ORTHO05D007272 4.1e-86 322.8 388 45.1
C02p59480 Brassica napus HOM05D002238 ORTHO05D007272 1.2e-85 321.2 389 44.7
Nitab4.5_0009119g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.6e-85 320.9 324 50.6
BolC2t12011H Brassica oleracea HOM05D002238 ORTHO05D007272 2.7e-85 320.1 389 45.5
A02p39700 Brassica napus HOM05D002238 ORTHO05D007272 5.0e-84 315.8 389 44.2
BraA02t08935Z Brassica rapa HOM05D002238 ORTHO05D007272 1.9e-83 313.9 389 43.7
GSVIVG01035523001 Vitis vinifera HOM05D002238 ORTHO05D007272 4.2e-83 312.8 439 43.1
SHI18572 Sapria himalayana HOM05D002238 ORTHO05D007272 5.7e-80 302.4 394 41.6
Nitab4.5_0017994g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 3.5e-77 293.1 295 51.5
BraA06t26543Z Brassica rapa HOM05D002238 ORTHO05D007272 3.3e-75 286.6 302 50.3
QL01p053808 Quercus lobata HOM05D002238 ORTHO05D007272 3.6e-74 283.1 257 56.4
Peaxi162Scf00365g00022 Petunia axillaris HOM05D002238 ORTHO05D007272 2.6e-72 276.9 419 41.3
Zm00001eb090760 Zea mays HOM05D002238 ORTHO05D007272 3.6e-66 256.5 426 37.1
Glyma.09G122801 Glycine max HOM05D002238 ORTHO05D007272 8.9e-65 251.9 196 59.7
ECA233G3411 Erigeron canadensis HOM05D002238 ORTHO05D007272 2.6e-64 250.4 227 52.4
ATR1156G046 Amborella trichopoda HOM05D002238 ORTHO05D007272 7.0e-62 242.3 268 47.0
Atru.chr7.2387 Acer truncatum HOM05D002238 ORTHO05D007272 3.0e-60 236.9 174 66.1
MD15G1119600 Malus domestica HOM05D002238 ORTHO05D007272 3.0e-60 236.9 232 53.4
Os11g0207300 Oryza sativa ssp. japonica HOM05D002238 ORTHO05D007272 8.6e-60 235.3 316 42.1
Duzib187G0736 Durio zibethinus HOM05D002238 ORTHO05D007272 2.8e-58 230.3 208 54.8
Nitab4.5_0004440g0040 Nicotiana tabacum HOM05D002238 ORTHO05D007272 8.9e-57 225.3 171 63.2
SalBow7G3196 Salvia bowleyana HOM05D002238 ORTHO05D007272 8.3e-55 218.8 429 34.7
Aqoxy5G03332 Aquilegia oxysepala HOM05D002238 ORTHO05D007272 4.1e-54 216.5 296 37.8
SalBow6G2105 Salvia bowleyana HOM05D002238 ORTHO05D007272 1.3e-52 211.5 432 33.6
QL10p065634 Quercus lobata HOM05D002238 ORTHO05D007272 5.8e-48 196.1 246 43.5
SEGI_41370 Sequoiadendron giganteum HOM05D002238 ORTHO05D007272 5.8e-48 196.1 375 31.2
MD15G1122300 Malus domestica HOM05D002238 ORTHO05D007272 1.4e-46 191.4 274 41.6
BcaNung07110 Brassica carinata HOM05D002238 ORTHO05D007272 6.0e-45 186.0 178 51.1
Peaxi162Scf00108g00048 Petunia axillaris HOM05D002238 ORTHO05D007272 2.3e-44 184.1 195 50.8
Nitab4.5_0013543g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 3.6e-42 176.8 135 61.5
Nitab4.5_0011728g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.9e-38 164.5 323 33.1
Peaxi162Scf00015g02010 Petunia axillaris HOM05D002238 ORTHO05D004044 2.4e-38 164.1 192 46.9
Nitab4.5_0012587g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 3.1e-33 147.1 278 33.5
Atru.chr7.2264 Acer truncatum HOM05D002238 ORTHO05D007272 1.5e-32 144.8 185 40.5
BcaB07g29994 Brassica carinata HOM05D002238 ORTHO05D007272 2.1e-29 134.4 178 42.1
MD15G1118500 Malus domestica HOM05D002238 ORTHO05D007272 2.1e-29 134.4 115 56.5
Nitab4.5_0011591g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 3.5e-29 133.7 110 60.0
Nitab4.5_0002007g0110 Nicotiana tabacum HOM05D002238 ORTHO05D007272 3.9e-28 130.2 111 58.6
A06p36210 Brassica napus HOM05D002238 ORTHO05D007272 1.9e-27 127.9 162 46.9
Nitab4.5_0002007g0090 Nicotiana tabacum HOM05D002238 ORTHO05D007272 9.0e-25 119.0 103 58.3
QL10p065406 Quercus lobata HOM05D002238 ORTHO05D007272 9.0e-25 119.0 245 31.8
Nitab4.5_0011728g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.5e-19 101.7 112 42.9
Nitab4.5_0012587g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 2.1e-18 97.8 112 41.1
Nitab4.5_0002007g0100 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.9e-11 74.7 87 37.9
Nitab4.5_0011591g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 3.7e-10 70.5 70 42.9
Peaxi162Scf00015g02018 Petunia axillaris HOM05D002238 ORTHO05D026268 4.2e-06 57.0 52 48.1


User provided reference genes

Program Settings