Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09122 Striga asiatica HOM05D007636 ORTHO05D003796 1.0e-165 586.6 296 100.0
SGA_v2.0_scaffold467G52042 Striga asiatica HOM05D007636 ORTHO05D003796 2.3e-96 356.3 338 61.8
SGA_v2.0_scaffold467G52045 Striga asiatica HOM05D003373 ORTHO05D004419 5.6e-79 298.5 370 51.1
SGA_v2.0_scaffold25G10881 Striga asiatica HOM05D007636 ORTHO05D003796 4.7e-41 172.6 413 36.1
SGA_v2.0_scaffold25G10851 Striga asiatica HOM05D007636 ORTHO05D003796 5.2e-40 169.1 416 35.6
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 6.3e-30 135.6 349 35.5
SGA_v2.0_scaffold18G08415 Striga asiatica HOM05D007636 ORTHO05D003796 2.2e-22 110.5 166 36.1
SGA_v2.0_scaffold40G15410 Striga asiatica HOM05D007636 ORTHO05D003796 4.8e-22 109.4 210 31.9
SGA_v2.0_scaffold18G08354 Striga asiatica HOM05D007636 ORTHO05D003796 8.3e-22 108.6 160 36.2
SGA_v2.0_scaffold135G34844 Striga asiatica HOM05D007636 ORTHO05D003796 2.1e-17 94.0 219 30.1
SGA_v2.0_scaffold135G34846 Striga asiatica HOM05D007636 ORTHO05D003796 4.4e-15 86.3 162 34.0
SGA_v2.0_scaffold1G00731 Striga asiatica HOM05D007636 ORTHO05D003796 1.7e-14 84.3 201 31.3
SGA_v2.0_scaffold18G08273 Striga asiatica HOM05D007636 ORTHO05D003796 1.8e-13 80.9 155 32.9
Actinidia18619 Actinidia chinensis HOM05D002630 ORTHO05D000952 4.1e-13 79.7 153 32.7
Nitab4.5_0002878g0020 Nicotiana tabacum HOM05D008050 ORTHO05D003796 4.1e-13 79.7 155 32.3
Sopen04g028020 Solanum pennellii HOM05D007636 ORTHO05D003796 7.0e-13 79.0 206 29.6
Actinidia00474 Actinidia chinensis HOM05D007636 ORTHO05D000952 9.2e-13 78.6 154 35.1
Actinidia18621 Actinidia chinensis HOM05D007636 ORTHO05D000952 1.2e-12 78.2 153 32.0
Peaxi162Scf00244g00076 Petunia axillaris HOM05D008050 ORTHO05D003796 1.2e-12 78.2 155 32.3
SGA_v2.0_scaffold1G00666 Striga asiatica HOM05D007636 ORTHO05D003796 1.2e-12 78.2 145 35.2
Peaxi162Scf00692g00052 Petunia axillaris HOM05D010426 ORTHO05D003796 2.0e-12 77.4 143 30.1
Peaxi162Scf01327g00121 Petunia axillaris HOM05D003646 ORTHO05D004503 4.5e-12 76.3 143 29.4
PGSC0003DMG400031146 Solanum tuberosum HOM05D007636 ORTHO05D003796 4.5e-12 76.3 165 33.3
Nitab4.5_0001874g0070 Nicotiana tabacum HOM05D008149 ORTHO05D010130 5.9e-12 75.9 162 27.2
Sopen01g016580 Solanum pennellii HOM05D007636 ORTHO05D003796 5.9e-12 75.9 220 29.5
PGSC0003DMG400025062 Solanum tuberosum HOM05D007636 ORTHO05D003796 5.9e-12 75.9 168 31.0
Solyc01g021730.2 Solanum lycopersicum HOM05D007636 ORTHO05D003796 1.0e-11 75.1 160 31.9
Sopen04g028190 Solanum pennellii HOM05D007636 ORTHO05D003796 2.3e-11 73.9 160 31.9
Nitab4.5_0001896g0010 Nicotiana tabacum HOM05D008149 ORTHO05D010130 2.9e-11 73.6 155 31.0
Nitab4.5_0010957g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 2.9e-11 73.6 167 26.9
Dinv05036 Davidia involucrata HOM05D002630 ORTHO05D000952 3.8e-11 73.2 159 30.8
MELO3C030697.2 Cucumis melo HOM05D002630 ORTHO05D000952 5.0e-11 72.8 160 31.2
Sopen04g028280 Solanum pennellii HOM05D007636 ORTHO05D003796 5.0e-11 72.8 160 31.9
PGSC0003DMG400025060 Solanum tuberosum HOM05D007636 ORTHO05D003796 5.0e-11 72.8 157 31.2
CAN.G358.103 Capsicum annuum HOM05D007636 ORTHO05D003796 6.6e-11 72.4 159 32.1
Nitab4.5_0004323g0060 Nicotiana tabacum HOM05D007636 ORTHO05D003796 6.6e-11 72.4 165 30.9
Peaxi162Scf00027g00162 Petunia axillaris HOM05D010426 ORTHO05D003796 6.6e-11 72.4 142 31.0
Solyc10g079220.2 Solanum lycopersicum HOM05D008149 ORTHO05D010130 6.6e-11 72.4 171 29.2
Ciclev10003273m.g Citrus clementina HOM05D000010 ORTHO05D000952 1.5e-10 71.2 147 34.7
CsaV3_4G025380 Cucumis sativus L. HOM05D002630 ORTHO05D000952 1.5e-10 71.2 159 30.2
Nitab4.5_0007033g0040 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.5e-10 71.2 163 31.3
Nitab4.5_0000608g0100 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.9e-10 70.9 162 27.2
Nitab4.5_0000082g0040 Nicotiana tabacum HOM05D008149 ORTHO05D010130 2.5e-10 70.5 163 27.0
Lj8P727T21 Lonicera japonica HOM05D014435 ORTHO05D000952 3.3e-10 70.1 160 29.4
Peaxi162Scf00493g00439 Petunia axillaris HOM05D008149 ORTHO05D010130 5.6e-10 69.3 146 30.8
Sopen04g028210 Solanum pennellii HOM05D007636 ORTHO05D003796 5.6e-10 69.3 160 31.2
Sopen10g029870 Solanum pennellii HOM05D008149 ORTHO05D010130 5.6e-10 69.3 156 29.5
Nitab4.5_0014265g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 7.3e-10 68.9 165 30.9
PGSC0003DMG400007065 Solanum tuberosum HOM05D008050 ORTHO05D003796 9.5e-10 68.6 152 31.6
PGSC0003DMG400031147 Solanum tuberosum HOM05D007636 ORTHO05D003796 9.5e-10 68.6 158 31.6
CAN.G308.28 Capsicum annuum HOM05D007636 ORTHO05D017739 1.2e-09 68.2 179 29.1
Lj8P727T20 Lonicera japonica HOM05D014435 ORTHO05D000952 2.8e-09 67.0 169 29.0
Peaxi162Scf00397g00022 Petunia axillaris HOM05D008050 ORTHO05D003796 2.8e-09 67.0 169 30.2
PGSC0003DMG400025061 Solanum tuberosum HOM05D007636 ORTHO05D003796 2.8e-09 67.0 168 30.4
Nitab4.5_0003562g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 3.6e-09 66.6 162 26.5
Peaxi162Scf00245g00112 Petunia axillaris HOM05D017006 ORTHO05D010130 3.6e-09 66.6 158 27.8
MELO3C009980.2 Cucumis melo HOM05D002630 ORTHO05D000952 4.7e-09 66.2 165 29.7
Thecc.10G139400 Theobroma cacao HOM05D002630 ORTHO05D000952 4.7e-09 66.2 165 33.3
CAN.G308.65 Capsicum annuum HOM05D008149 ORTHO05D010130 6.1e-09 65.9 157 26.8
Nitab4.5_0000016g0600 Nicotiana tabacum HOM05D007636 ORTHO05D003796 6.1e-09 65.9 165 30.3
Sopen10g022760 Solanum pennellii HOM05D000002 ORTHO05D000001 8.0e-09 65.5 156 28.8
CAN.G641.16 Capsicum annuum HOM05D008149 ORTHO05D010130 1.0e-08 65.1 178 28.7
CAN.G616.30 Capsicum annuum HOM05D009491 ORTHO05D003796 1.4e-08 64.7 159 28.3
CAN.G641.1 Capsicum annuum HOM05D008149 ORTHO05D010130 1.4e-08 64.7 176 29.0
Nitab4.5_0000499g0070 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.8e-08 64.3 154 26.6
PGSC0003DMG400008147 Solanum tuberosum HOM05D008149 ORTHO05D010130 3.0e-08 63.5 153 26.1
Ciclev10013622m.g Citrus clementina HOM05D002630 ORTHO05D000952 4.0e-08 63.2 160 27.5
CAN.G1095.3 Capsicum annuum HOM05D000069 ORTHO05D010130 5.2e-08 62.8 176 29.5
Peaxi162Scf00066g00145 Petunia axillaris HOM05D008149 ORTHO05D010130 5.2e-08 62.8 147 29.9
CAN.G78.33 Capsicum annuum HOM05D008050 ORTHO05D003796 6.8e-08 62.4 155 31.0
Lj8P728T9 Lonicera japonica HOM05D014435 ORTHO05D000952 6.8e-08 62.4 167 28.7
Solyc06g063380.1 Solanum lycopersicum HOM05D007636 ORTHO05D017739 6.8e-08 62.4 161 28.6
Lj8P730T30 Lonicera japonica HOM05D014435 ORTHO05D000952 8.9e-08 62.0 167 28.7
Sopen06g022850 Solanum pennellii HOM05D007636 ORTHO05D017739 1.5e-07 61.2 161 28.6
MD06G1030300 Malus domestica HOM05D002630 ORTHO05D000952 2.6e-07 60.5 164 28.7
PGSC0003DMG400000154 Solanum tuberosum HOM05D009491 ORTHO05D003796 2.6e-07 60.5 160 29.4
Ciclev10013691m.g Citrus clementina HOM05D002630 ORTHO05D000952 3.4e-07 60.1 132 30.3
Ciclev10013879m.g Citrus clementina HOM05D002630 ORTHO05D000952 3.4e-07 60.1 132 30.3
Lj8P729T8 Lonicera japonica HOM05D014435 ORTHO05D000952 3.4e-07 60.1 167 28.1
MD01G1094700 Malus domestica HOM05D000010 ORTHO05D015705 5.7e-07 59.3 169 28.4
Solyc04g025760.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 5.7e-07 59.3 149 27.5
Eucgr.E00551 Eucalyptus grandis HOM05D000010 ORTHO05D000952 1.3e-06 58.2 125 30.4
CAN.G1612.2 Capsicum annuum HOM05D008149 ORTHO05D010130 1.7e-06 57.8 138 28.3
CAN.G298.56 Capsicum annuum HOM05D007636 ORTHO05D017739 1.7e-06 57.8 180 26.7
PSO170G0081 Papaver somniferum HOM05D031459 ORTHO05D012496 1.7e-06 57.8 178 25.8
Sopen02g013020 Solanum pennellii HOM05D008149 ORTHO05D010130 3.7e-06 56.6 145 25.5
CAN.G641.11 Capsicum annuum HOM05D008149 ORTHO05D010130 8.3e-06 55.5 123 29.3


User provided reference genes

Program Settings