Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09112 Striga asiatica HOM05D007100 ORTHO05D008958 8.1e-88 327.4 212 100.0
Migut.A00035 Erythranthe guttata HOM05D007100 ORTHO05D008958 1.2e-59 233.8 218 75.7
Oeu057296.2 Olea europaea HOM05D007100 ORTHO05D008958 4.2e-52 208.8 222 70.3
Thecc.09G023500 Theobroma cacao HOM05D007100 ORTHO05D008958 3.6e-51 205.7 221 66.1
Duzib168G1945 Durio zibethinus HOM05D007100 ORTHO05D008958 1.0e-50 204.1 219 69.4
CAN.G1230.3 Capsicum annuum HOM05D007100 ORTHO05D008958 1.1e-49 200.7 222 70.3
PGSC0003DMG400020466 Solanum tuberosum HOM05D007100 ORTHO05D008958 1.5e-49 200.3 222 68.0
Cc08_g00530 Coffea canephora HOM05D007100 ORTHO05D008958 2.0e-49 199.9 216 68.5
Solyc06g066000.3 Solanum lycopersicum HOM05D007100 ORTHO05D008958 3.3e-49 199.1 222 68.5
Sopen06g024480 Solanum pennellii HOM05D007100 ORTHO05D008958 3.3e-49 199.1 222 68.5
PGSC0003DMG400020484 Solanum tuberosum HOM05D007100 ORTHO05D008958 3.3e-49 199.1 222 68.5
Potri.006G255600 Populus trichocarpa HOM05D007100 ORTHO05D008958 5.7e-49 198.4 222 68.0
Ah.16g104500 Amaranthus hybridus HOM05D007100 ORTHO05D008958 4.8e-48 195.3 224 67.0
Cpa.g.sc217.8 Carica papaya HOM05D007100 ORTHO05D008958 4.8e-48 195.3 219 65.3
Potri.018G026500 Populus trichocarpa HOM05D007100 ORTHO05D008958 6.3e-48 194.9 222 67.1
Sopen06g024470 Solanum pennellii HOM05D007100 ORTHO05D008958 8.2e-48 194.5 222 68.0
FvH4_2g28951 Fragaria vesca HOM05D007100 ORTHO05D008958 1.8e-47 193.4 213 70.9
FAN20G2791 Fragaria x ananassa HOM05D007100 ORTHO05D008958 1.8e-47 193.4 213 70.4
CSS0028708 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 1.2e-46 190.7 219 70.3
RcHm_v2.0_Chr6g0297791 Rosa chinensis HOM05D007100 ORTHO05D008958 1.2e-46 190.7 213 68.1
CSS0035808 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 2.0e-46 189.9 219 70.3
MD15G1126100 Malus domestica HOM05D007100 ORTHO05D008958 2.6e-46 189.5 217 66.8
TPR.G3111 Trifolium pratense HOM05D007100 ORTHO05D008958 2.6e-46 189.5 215 62.8
BolC1t00671H Brassica oleracea HOM05D007100 ORTHO05D008958 4.5e-46 188.7 220 68.2
PSO210G6161 Papaver somniferum HOM05D007100 ORTHO05D008958 4.5e-46 188.7 225 68.0
BcaC09g52005 Brassica carinata HOM05D007100 ORTHO05D008958 1.0e-45 187.6 223 67.3
Sabra18G0029100 Salix brachista HOM05D007100 ORTHO05D008958 1.7e-45 186.8 217 60.8
Ah.10g035800 Amaranthus hybridus HOM05D007100 ORTHO05D008958 3.8e-45 185.7 222 65.3
BraA01t00579Z Brassica rapa HOM05D007100 ORTHO05D008958 3.8e-45 185.7 224 63.8
VMungo1309G2169 Vigna mungo HOM05D007100 ORTHO05D008958 3.8e-45 185.7 216 62.5
Carub.0007s0834 Capsella rubella HOM05D007100 ORTHO05D008958 8.5e-45 184.5 225 66.2
PSO210G2345 Papaver somniferum HOM05D007100 ORTHO05D008958 8.5e-45 184.5 226 67.7
AL7G19610 Arabidopsis lyrata HOM05D007100 ORTHO05D008958 1.1e-44 184.1 220 67.7
Lsat_1_v5_gn_6_21280 Lactuca sativa HOM05D007100 ORTHO05D008958 1.1e-44 184.1 222 66.2
Lj1g0026662 Lotus japonicus HOM05D007100 ORTHO05D008958 1.1e-44 184.1 221 67.0
COL.COLO4_18868 Corchorus olitorius HOM05D007100 ORTHO05D008958 3.2e-44 182.6 221 62.4
Solyc06g065990.1 Solanum lycopersicum HOM05D007100 ORTHO05D008958 3.2e-44 182.6 222 65.3
Prupe.1G482000 Prunus persica HOM05D007100 ORTHO05D008958 4.2e-44 182.2 215 66.0
QL02p021503 Quercus lobata HOM05D007100 ORTHO05D008958 5.5e-44 181.8 222 66.7
AT4G32260 Arabidopsis thaliana HOM05D007100 ORTHO05D008958 2.7e-43 179.5 220 66.8
TAR625G1529 Trochodendron aralioides HOM05D007100 ORTHO05D008958 2.7e-43 179.5 225 63.6
CARHR240140 Cardamine hirsuta HOM05D007100 ORTHO05D008958 3.6e-43 179.1 221 64.7
Glyma.04G066000 Glycine max HOM05D007100 ORTHO05D008958 3.6e-43 179.1 216 65.3
Sed0021254 Sechium edule HOM05D007100 ORTHO05D008958 4.7e-43 178.7 217 61.3
CsaV3_2G032160 Cucumis sativus L. HOM05D007100 ORTHO05D008958 6.1e-43 178.3 219 58.4
TWI32G1182 Tripterygium wilfordii HOM05D007100 ORTHO05D008958 6.1e-43 178.3 223 64.6
Aqoxy7G03649 Aquilegia oxysepala HOM05D007100 ORTHO05D008958 7.9e-43 177.9 221 65.6
CANSAT25G0532 Cannabis sativa HOM05D007100 ORTHO05D008958 7.9e-43 177.9 219 60.7
Nitab4.5_0003634g0020 Nicotiana tabacum HOM05D007100 ORTHO05D008958 7.9e-43 177.9 214 67.8
Nitab4.5_0000109g0380 Nicotiana tabacum HOM05D007100 ORTHO05D008958 1.4e-42 177.2 160 79.4
Aa31LG2G17720 Aethionema arabicum HOM05D007100 ORTHO05D008958 3.0e-42 176.0 224 67.4
CiPaw.03G162500 Carya illinoinensis HOM05D007100 ORTHO05D008958 5.1e-42 175.3 221 64.3
MELO3C011269.2 Cucumis melo HOM05D007100 ORTHO05D008958 6.7e-42 174.9 219 58.9
Eucgr.C02765 Eucalyptus grandis HOM05D007100 ORTHO05D008958 8.8e-42 174.5 229 63.8
Atru.chr7.2441 Acer truncatum HOM05D007100 ORTHO05D008958 3.3e-41 172.6 227 60.8
ClCG08G013430 Citrullus lanatus HOM05D007100 ORTHO05D008958 5.7e-41 171.8 219 58.0
Manes.03G013900 Manihot esculenta HOM05D007100 ORTHO05D008958 5.7e-41 171.8 222 63.1
unitig_32.g11115 Utricularia gibba HOM05D007100 ORTHO05D008958 5.7e-41 171.8 211 64.9
Thhalv10026214m.g Eutrema salsugineum HOM05D007100 ORTHO05D008958 7.4e-41 171.4 220 65.5
Sp7g29990 Schrenkiella parvula HOM05D007100 ORTHO05D008958 7.4e-41 171.4 220 66.4
CDE02G1895 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 1.7e-40 170.2 216 65.3
AUR62012407 Chenopodium quinoa HOM05D007100 ORTHO05D008958 1.7e-40 170.2 152 77.0
Lalb_Chr08g0244131 Lupinus albus HOM05D007100 ORTHO05D008958 1.7e-40 170.2 215 63.7
Manes.16G122700 Manihot esculenta HOM05D007100 ORTHO05D008958 1.7e-40 170.2 224 61.2
Phvul.009G092366 Phaseolus vulgaris HOM05D007100 ORTHO05D008958 4.8e-40 168.7 216 61.6
Cfa013136 Carpinus fangiana HOM05D007100 ORTHO05D008958 6.3e-40 168.3 216 64.8
Medtr3g106820 Medicago truncatula HOM05D007100 ORTHO05D008958 6.3e-40 168.3 215 59.5
Rhsim02G0202100 Rhododendron simsii HOM05D007100 ORTHO05D008958 1.4e-39 167.2 214 64.5
AUR62031529 Chenopodium quinoa HOM05D007100 ORTHO05D008958 2.4e-39 166.4 216 60.2
CDE08G0375 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 3.1e-39 166.0 220 62.7
HanXRQChr13g0403031 Helianthus annuus HOM05D007100 ORTHO05D008958 4.1e-39 165.6 219 66.2
BcaNung03145 Brassica carinata HOM05D002526 ORTHO05D004039 1.2e-38 164.1 219 66.2
C01p06770 Brassica napus HOM05D002526 ORTHO05D004039 2.6e-38 162.9 167 64.7
Duzib150G1121 Durio zibethinus HOM05D007100 ORTHO05D008958 4.5e-38 162.2 220 61.4
Glyma.06G067400 Glycine max HOM05D007100 ORTHO05D008958 4.5e-38 162.2 216 62.0
Hma1.2p1_0243F.1_g100880 Hydrangea macrophylla HOM05D007100 ORTHO05D008958 5.9e-38 161.8 218 60.6
A01p06140 Brassica napus HOM05D002526 ORTHO05D004039 2.2e-37 159.8 171 62.6
Ca_15742_v3 Cicer arietinum L. HOM05D007100 ORTHO05D008958 5.0e-37 158.7 163 68.1
ATR0800G074 Amborella trichopoda HOM05D007100 ORTHO05D008958 1.1e-36 157.5 144 60.4
PGR044G2669 Punica granatum HOM05D007100 ORTHO05D008958 1.1e-36 157.5 219 56.2
ECA233G2559 Erigeron canadensis HOM05D007100 ORTHO05D008958 2.1e-35 153.3 215 61.9
Ciclev10009435m.g Citrus clementina HOM05D007100 ORTHO05D008958 2.7e-35 152.9 223 50.2
MBI18_g07570_MAGBIO Magnolia biondii HOM05D007100 ORTHO05D008958 2.3e-34 149.8 212 61.8
Nn2g12100 Nelumbo nucifera HOM05D007100 ORTHO05D008958 2.3e-34 149.8 151 74.8
EL10Ac2g04205 Beta vulgaris HOM05D007100 ORTHO05D008958 1.3e-32 144.1 181 61.3
Lj7A724T61 Lonicera japonica HOM05D007100 ORTHO05D008958 1.2e-30 137.5 213 59.2
Dinv08635 Davidia involucrata HOM05D007100 ORTHO05D008958 5.9e-30 135.2 126 72.2
Nitab4.5_0011986g0010 Nicotiana tabacum HOM05D007100 ORTHO05D008958 3.8e-29 132.5 124 81.5
HPP92_017087 Vanilla planifolia HOM05D007100 ORTHO05D008958 8.5e-29 131.3 176 63.6
Sc09g0008150 Simmondsia chinensis HOM05D007100 ORTHO05D008958 5.5e-28 128.6 152 67.1
Os03g0278900 Oryza sativa ssp. japonica HOM05D007100 ORTHO05D008958 8.8e-26 121.3 167 62.3
CiPaw.05G145000 Carya illinoinensis HOM05D007100 ORTHO05D008958 5.4e-23 112.1 74 79.7
AagrBONN_evm.TU.Sc2ySwM_117.789 Anthoceros agrestis HOM05D007100 ORTHO05D008958 1.6e-22 110.5 161 50.3
Sabra06G0199900 Salix brachista HOM05D007100 ORTHO05D008958 1.6e-22 110.5 108 79.6
Zm00001eb397520 Zea mays HOM05D007100 ORTHO05D008958 2.0e-22 110.2 215 54.4
SMO347G0047 Selaginella moellendorffii HOM05D007100 ORTHO05D008958 1.0e-21 107.8 85 67.1
Gohir.A07G028825 Gossypium hirsutum HOM05D007100 ORTHO05D008958 1.3e-21 107.5 106 82.1
Gohir.D07G032851 Gossypium hirsutum HOM05D007100 ORTHO05D008958 1.3e-21 107.5 106 73.6
Nitab4.5_0002042g0090 Nicotiana tabacum HOM05D007100 ORTHO05D008958 4.2e-20 102.4 107 81.3
Cre11.g481450 Chlamydomonas reinhardtii HOM05D007100 ORTHO05D008958 1.2e-19 100.9 209 32.5
HPP92_017015 Vanilla planifolia HOM05D007100 ORTHO05D008958 6.1e-19 98.6 145 45.5
SEGI_36293 Sequoiadendron giganteum HOM05D007100 ORTHO05D008958 1.0e-18 97.8 151 55.6
Pp3c16_15270 Physcomitrium patens HOM05D007100 ORTHO05D008958 6.8e-18 95.1 108 50.0
Pp3c6_23221 Physcomitrium patens HOM05D007100 ORTHO05D008958 6.8e-18 95.1 164 54.3
Mapoly0061s0013 Marchantia polymorpha HOM05D007100 ORTHO05D008958 8.8e-18 94.7 163 54.6
Pp3c5_7810 Physcomitrium patens HOM05D007100 ORTHO05D008958 1.2e-17 94.4 152 55.9
PRCOL_00004936 Prasinoderma coloniale HOM05D007100 ORTHO05D008958 1.0e-13 81.3 85 45.9
RcHm_v2.0_Chr4g0429151 Rosa chinensis HOM05D007100 ORTHO05D008958 5.0e-13 79.0 60 66.7
CBR_g39245 Chara braunii HOM05D007100 ORTHO05D008958 8.6e-13 78.2 93 50.5
MCO01G691 Micromonas commoda HOM05D007100 ORTHO05D008958 2.6e-09 66.6 124 41.9
Psat2g007880 Pisum sativum HOM05D007100 ORTHO05D008958 4.4e-09 65.9 84 46.4
ATR0743G144 Amborella trichopoda HOM05D007100 ORTHO05D008958 2.0e-06 57.0 101 42.6
AUR62039691 Chenopodium quinoa HOM05D026575 ORTHO05D028765 7.8e-06 55.1 38 78.9


User provided reference genes

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