Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 1.1e-164 583.2 285 100.0
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 4.1e-151 538.1 292 89.0
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 5.9e-150 534.3 292 88.7
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 2.2e-149 532.3 285 89.5
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 8.8e-146 520.4 292 86.6
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 2.0e-145 519.2 289 87.5
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 2.0e-145 519.2 290 86.2
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 2.0e-145 519.2 292 87.0
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 2.0e-145 519.2 292 86.6
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 3.3e-145 518.5 292 86.6
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 7.4e-145 517.3 290 86.2
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 6.3e-144 514.2 290 84.5
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 1.1e-143 513.5 292 85.6
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 2.4e-143 512.3 292 84.9
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 2.4e-143 512.3 292 84.6
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 2.6e-142 508.8 288 84.4
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 3.4e-142 508.4 291 84.9
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 5.9e-142 507.7 292 83.9
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 5.9e-142 507.7 292 83.9
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 1.3e-141 506.5 288 84.4
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 1.7e-141 506.1 292 83.6
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 2.9e-141 505.4 290 83.4
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 2.9e-141 505.4 288 84.0
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 5.0e-141 504.6 292 84.2
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 5.0e-141 504.6 292 84.6
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 6.5e-141 504.2 292 82.9
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 6.5e-141 504.2 292 83.6
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 8.5e-141 503.8 292 83.6
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 1.1e-140 503.4 292 83.6
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 1.1e-140 503.4 292 82.2
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.1e-140 503.4 292 84.2
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 1.4e-140 503.1 288 83.0
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 1.4e-140 503.1 292 82.9
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 1.9e-140 502.7 288 83.0
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 2.5e-140 502.3 292 83.6
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 3.2e-140 501.9 292 83.2
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 3.2e-140 501.9 292 83.2
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 4.2e-140 501.5 290 83.4
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 7.2e-140 500.7 292 83.9
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 1.2e-139 500.0 292 82.5
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 2.7e-139 498.8 292 82.9
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 3.6e-139 498.4 292 81.2
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 3.6e-139 498.4 289 81.7
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 3.6e-139 498.4 292 82.2
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 3.6e-139 498.4 288 83.0
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 3.6e-139 498.4 294 83.3
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 3.6e-139 498.4 292 82.9
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 8.0e-139 497.3 288 81.2
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 1.8e-138 496.1 287 83.3
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 1.8e-138 496.1 287 83.3
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 1.8e-138 496.1 292 82.5
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 2.3e-138 495.7 291 83.2
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 3.9e-138 495.0 292 82.2
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 6.7e-138 494.2 292 82.2
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 6.7e-138 494.2 292 82.2
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 6.7e-138 494.2 290 82.4
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 1.5e-137 493.0 290 80.7
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.0e-137 492.7 289 82.7
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 2.6e-137 492.3 292 81.8
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 4.4e-137 491.5 292 81.5
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 4.4e-137 491.5 292 81.8
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 9.7e-137 490.3 290 82.1
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 9.7e-137 490.3 292 81.8
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 2.2e-136 489.2 321 75.4
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 2.8e-136 488.8 289 82.0
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 3.7e-136 488.4 280 83.6
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 4.8e-136 488.0 289 81.7
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 5.3e-135 484.6 290 80.0
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 2.0e-134 482.6 281 81.5
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 7.7e-134 480.7 292 80.8
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 1.3e-133 479.9 290 81.0
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 5.0e-133 478.0 292 78.4
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 5.0e-133 478.0 292 78.8
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 6.5e-133 477.6 292 78.4
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 8.5e-133 477.2 290 78.6
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 8.5e-133 477.2 290 78.6
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 1.5e-132 476.5 292 78.1
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 2.5e-132 475.7 287 77.7
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 2.5e-132 475.7 292 77.7
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 4.2e-132 474.9 291 77.3
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 5.5e-132 474.6 292 77.7
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 3.6e-131 471.9 292 77.4
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 6.1e-131 471.1 292 77.4
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 8.0e-131 470.7 291 76.6
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 1.8e-130 469.5 289 77.5
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 2.3e-130 469.2 292 76.7
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 8.8e-130 467.2 292 76.7
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 8.8e-130 467.2 285 80.7
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 8.8e-130 467.2 293 77.5
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 1.2e-129 466.8 272 83.5
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 2.0e-129 466.1 292 76.0
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 2.0e-129 466.1 285 80.4
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 5.7e-129 464.5 290 77.2
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 3.7e-128 461.8 294 78.2
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 6.3e-128 461.1 274 82.5
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 1.4e-127 459.9 290 74.8
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 1.4e-127 459.9 290 74.8
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 1.4e-127 459.9 289 78.2
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 1.8e-127 459.5 288 75.3
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 1.8e-127 459.5 288 75.3
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 4.1e-127 458.4 291 74.6
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 5.3e-127 458.0 272 81.6
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 9.1e-127 457.2 278 79.9
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 1.9e-124 449.5 289 75.1
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 5.5e-124 448.0 255 84.3
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 9.4e-124 447.2 271 80.4
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 1.4e-122 443.4 313 72.5
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 1.8e-122 443.0 294 72.4
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 4.4e-121 438.3 292 76.0
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 1.6e-118 429.9 285 71.6
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 1.3e-117 426.8 309 69.9
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 8.0e-115 417.5 286 69.9
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.1e-111 407.1 281 68.0
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 9.2e-111 404.1 271 74.2
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 4.5e-110 401.7 273 70.3
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.9e-108 396.4 267 70.4
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 7.5e-105 384.4 281 63.3
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 1.7e-104 383.3 223 82.1
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 5.6e-92 341.7 186 87.6
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 2.3e-90 336.3 321 57.9
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 1.2e-89 334.0 186 88.2
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.2e-83 313.9 188 83.5
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 1.5e-81 307.0 289 51.9
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 1.0e-77 294.3 296 52.4
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 1.7e-77 293.5 173 81.5
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 1.9e-76 290.0 294 52.0
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 6.2e-75 285.0 188 72.3
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 4.3e-68 262.3 295 45.4
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 4.5e-57 225.7 157 71.3
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 9.3e-55 218.0 310 43.2
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.5e-52 210.7 224 53.6
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 8.2e-51 204.9 221 53.4
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 5.3e-42 175.6 101 84.2
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 9.0e-42 174.9 102 82.4
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 9.0e-42 174.9 106 78.3
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 5.5e-39 165.6 96 83.3
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 1.5e-28 131.0 76 85.5
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 7.2e-23 112.1 164 41.5
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.9e-21 106.3 96 61.5
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 1.7e-08 64.3 40 85.0


User provided reference genes

Program Settings