Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 0.0e+00 1662.1 843 100.0
SGA_v2.0_scaffold66G22505 Striga asiatica HOM05D000096 ORTHO05D000045 1.9e-265 919.5 812 64.0
SGA_v2.0_scaffold14G06973 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-123 448.0 601 47.6
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-107 394.8 471 44.2
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 2.8e-107 394.0 515 42.5
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 3.9e-101 373.6 484 43.0
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 6.7e-101 372.9 482 43.2
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 1.8e-93 348.2 290 66.9
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-84 318.9 523 37.5
SGA_v2.0_scaffold121G33153 Striga asiatica HOM05D006612 ORTHO05D009014 3.2e-71 274.2 567 30.7
SGA_v2.0_scaffold511G52629 Striga asiatica HOM05D006612 ORTHO05D009014 3.4e-68 264.2 466 33.3
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 7.5e-68 263.1 525 30.7
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 9.1e-66 256.1 485 32.0
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 6.1e-62 243.4 542 29.5
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 3.0e-61 241.1 400 35.2
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 3.7e-59 234.2 454 30.2
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 7.7e-57 226.5 491 30.8
SGA_v2.0_scaffold27G11560 Striga asiatica HOM05D000096 ORTHO05D000045 1.0e-56 226.1 210 63.3
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 2.8e-51 208.0 421 31.1
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-50 206.1 563 26.1
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 7.8e-49 199.9 384 31.8
SGA_v2.0_scaffold154G37090 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-48 199.1 454 29.5
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.1e-46 191.8 448 30.4
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 6.8e-45 186.8 484 28.5
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 6.0e-41 173.7 432 27.3
SGA_v2.0_scaffold1G00025 Striga asiatica HOM05D006612 ORTHO05D009014 3.9e-40 171.0 451 28.4
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 6.2e-38 163.7 330 30.3
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-37 162.5 372 27.2
SGA_v2.0_scaffold1G00633 Striga asiatica HOM05D006612 ORTHO05D009014 3.4e-36 157.9 239 37.2
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 3.4e-36 157.9 474 25.1
Lsat_1_v5_gn_1_29400 Lactuca sativa HOM05D006612 ORTHO05D009014 4.4e-36 157.5 349 27.5
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 5.8e-36 157.1 453 28.5
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-35 155.6 365 27.7
SGA_v2.0_scaffold263G45988 Striga asiatica HOM05D006612 ORTHO05D009014 6.4e-35 153.7 450 26.2
SGA_v2.0_scaffold123G33418 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-34 152.9 452 25.0
Cc11_g04430 Coffea canephora HOM05D006612 ORTHO05D009014 9.2e-34 149.8 168 44.0
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-33 149.1 246 33.7
SGA_v2.0_scaffold33G13377 Striga asiatica HOM05D006612 ORTHO05D009014 5.6e-31 140.6 174 42.5
Cc07_g15780 Coffea canephora HOM05D006612 ORTHO05D009014 1.6e-30 139.0 141 44.7
SGA_v2.0_scaffold169G38616 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-29 134.8 286 28.7
SGA_v2.0_scaffold83G26370 Striga asiatica HOM05D006612 ORTHO05D009014 8.9e-29 133.3 287 29.6
SGA_v2.0_scaffold9G04714 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-28 132.5 420 26.4
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 2.6e-28 131.7 333 26.7
SGA_v2.0_scaffold213G42222 Striga asiatica HOM05D006612 ORTHO05D009014 7.6e-28 130.2 296 29.7
Cc09_g02240 Coffea canephora HOM05D006612 ORTHO05D009014 9.9e-28 129.8 139 42.4
SGA_v2.0_scaffold13G06611 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-27 129.4 259 36.3
SGA_v2.0_scaffold87G27099 Striga asiatica HOM05D031284 ORTHO05D009014 3.7e-27 127.9 303 27.1
SGA_v2.0_scaffold144G35921 Striga asiatica HOM05D006612 ORTHO05D009014 4.9e-27 127.5 125 44.8
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 5.4e-26 124.0 254 31.5
SGA_v2.0_scaffold135G34887 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-25 122.5 241 29.9
SGA_v2.0_scaffold132G34534 Striga asiatica HOM05D006612 ORTHO05D009014 6.0e-25 120.6 143 45.5
SGA_v2.0_scaffold144G35923 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-24 119.4 243 31.3
Cc00_g35160 Coffea canephora HOM05D006612 ORTHO05D009014 7.3e-23 113.6 183 35.0
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 7.3e-23 113.6 158 36.1
SGA_v2.0_scaffold188G40332 Striga asiatica HOM05D006612 ORTHO05D009014 3.6e-22 111.3 132 46.2
SGA_v2.0_scaffold3598G54367 Striga asiatica HOM05D006612 ORTHO05D009014 6.2e-22 110.5 112 48.2
SGA_v2.0_scaffold43G16209 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-21 109.4 241 27.0
SGA_v2.0_scaffold52G19153 Striga asiatica HOM05D006612 ORTHO05D009014 1.8e-21 109.0 295 25.8
SGA_v2.0_scaffold146G36211 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-20 106.3 107 44.9
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.5e-20 105.9 386 22.8
Cc02_g21340 Coffea canephora HOM05D006612 ORTHO05D009014 1.5e-20 105.9 166 34.9
SGA_v2.0_scaffold116G32287 Striga asiatica HOM05D006612 ORTHO05D009014 9.9e-20 103.2 241 26.6
SGA_v2.0_scaffold1G00207 Striga asiatica HOM05D006612 ORTHO05D009014 9.9e-20 103.2 159 33.3
Atru.chr12.1651 Acer truncatum HOM05D000096 ORTHO05D000045 8.4e-19 100.1 283 24.7
Cc09_g02230 Coffea canephora HOM05D006612 ORTHO05D009014 1.6e-17 95.9 269 27.5
Lsat_1_v5_gn_8_167080 Lactuca sativa HOM05D006612 ORTHO05D009014 1.6e-17 95.9 128 35.2
AUR62043068 Chenopodium quinoa HOM05D003315 ORTHO05D003407 2.1e-17 95.5 295 25.8
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 3.5e-17 94.7 547 20.8
SGA_v2.0_scaffold134G34706 Striga asiatica HOM05D006612 ORTHO05D009014 1.0e-16 93.2 139 36.7
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 1.0e-16 93.2 209 28.2
SGA_v2.0_scaffold116G32265 Striga asiatica HOM05D006612 ORTHO05D009014 2.3e-16 92.0 184 37.5
SGA_v2.0_scaffold41G15809 Striga asiatica HOM05D006612 ORTHO05D009014 3.0e-16 91.7 268 24.6
Rhsim08G0044600 Rhododendron simsii HOM05D008336 ORTHO05D011520 3.9e-16 91.3 204 28.9
Peaxi162Scf00565g00829 Petunia axillaris HOM05D002261 ORTHO05D002334 1.9e-15 89.0 321 24.0
SGA_v2.0_scaffold19G08855 Striga asiatica HOM05D006612 ORTHO05D009014 5.6e-15 87.4 136 34.6
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 9.6e-15 86.7 311 24.8
Cc01_g08100 Coffea canephora HOM05D000096 ORTHO05D000045 2.1e-14 85.5 175 29.1
SGA_v2.0_scaffold24G10704 Striga asiatica HOM05D021043 ORTHO05D009014 2.4e-13 82.0 153 27.5
Cc03_g10290 Coffea canephora HOM05D006612 ORTHO05D009014 3.1e-13 81.6 111 34.2
SGA_v2.0_scaffold32G13336 Striga asiatica HOM05D021043 ORTHO05D009014 3.1e-13 81.6 153 27.5
AUR62041114 Chenopodium quinoa HOM05D003315 ORTHO05D003407 6.9e-13 80.5 298 22.5
Sopen02g008580 Solanum pennellii HOM05D002261 ORTHO05D002334 9.0e-13 80.1 305 22.6
Cc02_g03800 Coffea canephora HOM05D006612 ORTHO05D009014 1.2e-12 79.7 179 27.4
Dinv08482 Davidia involucrata HOM05D000824 ORTHO05D010619 1.5e-12 79.3 137 27.7
Rhsim06G0109600 Rhododendron simsii HOM05D002224 ORTHO05D002334 1.5e-12 79.3 189 24.9
SGA_v2.0_scaffold116G32264 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-12 79.3 134 33.6
SGA_v2.0_scaffold28G11832 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-12 79.3 155 29.7
SGA_v2.0_scaffold53G19313 Striga asiatica HOM05D021043 ORTHO05D009014 1.5e-12 79.3 205 26.3
CSS0028456 Camellia sinensis var. sinensis HOM05D002261 ORTHO05D002334 4.4e-12 77.8 185 29.2
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 5.8e-12 77.4 167 26.3
Oeu032902.1 Olea europaea HOM05D008860 ORTHO05D010619 1.3e-11 76.3 306 22.5
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.9e-11 75.1 212 27.4
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 3.8e-11 74.7 120 29.2
PGSC0003DMG400037214 Solanum tuberosum HOM05D002327 ORTHO05D002306 8.4e-11 73.6 302 22.2
SGA_v2.0_scaffold106G30692 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-10 72.8 91 37.4
Peaxi162Scf00045g02132 Petunia axillaris HOM05D002327 ORTHO05D002306 1.9e-10 72.4 327 22.9
Hma1.2p1_2379F.1_g320940 Hydrangea macrophylla HOM05D009267 ORTHO05D010619 5.4e-10 70.9 113 30.1
CANSAT25G2360 Cannabis sativa HOM05D009267 ORTHO05D010384 7.1e-10 70.5 398 20.4
AUR62040149 Chenopodium quinoa HOM05D003315 ORTHO05D003407 7.1e-10 70.5 296 21.6
Nitab4.5_0011586g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.1e-10 70.5 301 21.6
SGA_v2.0_scaffold116G32266 Striga asiatica HOM05D006612 ORTHO05D403650 2.1e-09 68.9 306 23.9
Dinv05943 Davidia involucrata HOM05D006612 ORTHO05D010619 2.7e-09 68.6 134 28.4
Oeu029240.1 Olea europaea HOM05D008860 ORTHO05D010619 2.7e-09 68.6 168 25.6
PGSC0003DMG401008657 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.7e-09 68.6 116 31.0
SGA_v2.0_scaffold618G53217 Striga asiatica HOM05D021043 ORTHO05D009014 2.7e-09 68.6 97 34.0
unitig_62.g23555 Utricularia gibba HOM05D000824 ORTHO05D003555 2.7e-09 68.6 402 19.2
Rhsim08G0049800 Rhododendron simsii HOM05D023805 ORTHO05D010384 3.5e-09 68.2 445 21.8
AUR62036305 Chenopodium quinoa HOM05D003315 ORTHO05D003407 6.0e-09 67.4 302 17.9
CANSAT35G0072 Cannabis sativa HOM05D006612 ORTHO05D010384 7.9e-09 67.0 132 30.3
SGA_v2.0_scaffold511G52630 Striga asiatica HOM05D000096 ORTHO05D000045 1.0e-08 66.6 58 46.6
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 1.3e-08 66.2 137 27.7
CANSAT01G1154 Cannabis sativa HOM05D000824 ORTHO05D010619 1.7e-08 65.9 171 26.3
SGA_v2.0_scaffold107G30792 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-08 65.9 70 47.1
SGA_v2.0_scaffold24G10705 Striga asiatica HOM05D018457 ORTHO05D000045 1.7e-08 65.9 61 47.5
SGA_v2.0_scaffold32G13337 Striga asiatica HOM05D018457 ORTHO05D000045 1.7e-08 65.9 61 47.5
SGA_v2.0_scaffold33G13376 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-08 65.9 106 30.2
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 2.3e-08 65.5 153 23.5
Oeu003462.1 Olea europaea HOM05D008860 ORTHO05D010619 3.0e-08 65.1 135 28.9
Dinv26739 Davidia involucrata HOM05D000824 ORTHO05D010384 3.9e-08 64.7 137 25.5
Nitab4.5_0000015g0360 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.9e-08 64.7 303 20.8
AUR62034168 Chenopodium quinoa HOM05D003315 ORTHO05D003407 5.1e-08 64.3 278 21.6
Ah.11g047720 Amaranthus hybridus HOM05D000824 ORTHO05D003555 6.6e-08 63.9 410 20.0
AUR62028024 Chenopodium quinoa HOM05D003315 ORTHO05D003407 6.6e-08 63.9 213 22.1
Oeu026609.1 Olea europaea HOM05D008860 ORTHO05D010619 6.6e-08 63.9 129 28.7
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 6.6e-08 63.9 111 30.6
Peaxi162Scf00795g00069 Petunia axillaris HOM05D002261 ORTHO05D002334 8.7e-08 63.5 105 32.4
CANSAT21G1209 Cannabis sativa HOM05D009267 ORTHO05D010384 1.1e-07 63.2 143 25.9
Nitab4.5_0002588g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-07 63.2 141 27.7
SGA_v2.0_scaffold122G33346 Striga asiatica HOM05D031284 ORTHO05D009014 1.1e-07 63.2 175 26.3
CiPaw.09G189900 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.5e-07 62.8 64 51.6
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.5e-07 62.8 76 42.1
CANSAT11G0110 Cannabis sativa HOM05D009267 ORTHO05D010384 1.9e-07 62.4 141 25.5
CiPaw.02G003800 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.9e-07 62.4 64 50.0
Sed0022878 Sechium edule HOM05D000824 ORTHO05D003555 2.5e-07 62.0 464 18.3
AUR62013558 Chenopodium quinoa HOM05D003315 ORTHO05D003407 4.3e-07 61.2 168 23.8
AUR62008792 Chenopodium quinoa HOM05D003315 ORTHO05D003407 5.6e-07 60.8 133 27.1
AUR62008794 Chenopodium quinoa HOM05D003315 ORTHO05D003407 5.6e-07 60.8 133 27.1
PGSC0003DMG400016517 Solanum tuberosum HOM05D018632 ORTHO05D018880 5.6e-07 60.8 90 36.7
PGSC0003DMG400045585 Solanum tuberosum HOM05D002327 ORTHO05D002306 5.6e-07 60.8 181 25.4
CiPaw.09G168700 Carya illinoinensis HOM05D000096 ORTHO05D000045 7.3e-07 60.5 67 46.3
Oeu013093.1 Olea europaea HOM05D019936 ORTHO05D010619 7.3e-07 60.5 128 28.9
PGSC0003DMG400040732 Solanum tuberosum HOM05D002327 ORTHO05D002306 7.3e-07 60.5 153 26.1
AUR62041865 Chenopodium quinoa HOM05D003315 ORTHO05D003407 9.6e-07 60.1 137 27.7
AUR62041866 Chenopodium quinoa HOM05D003315 ORTHO05D003407 9.6e-07 60.1 137 27.7
Nitab4.5_0005054g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.6e-07 60.1 111 29.7
CANSAT64G1628 Cannabis sativa HOM05D000096 ORTHO05D000045 2.1e-06 58.9 72 43.1
SGA_v2.0_scaffold158G37500 Striga asiatica HOM05D006612 ORTHO05D009014 2.1e-06 58.9 64 37.5
Ah.09g226650 Amaranthus hybridus HOM05D003315 ORTHO05D003407 2.8e-06 58.5 115 28.7
CBR_g23266 Chara braunii HOM05D000824 ORTHO05D003555 3.6e-06 58.2 185 22.7
Peaxi162Scf01208g00143 Petunia axillaris HOM05D002327 ORTHO05D002306 3.6e-06 58.2 133 24.1
SGA_v2.0_scaffold68G23014 Striga asiatica HOM05D000096 ORTHO05D000045 3.6e-06 58.2 60 43.3
CANSAT64G2911 Cannabis sativa HOM05D000096 ORTHO05D000045 6.2e-06 57.4 76 39.5
CiPaw.08G169300 Carya illinoinensis HOM05D000096 ORTHO05D000045 8.1e-06 57.0 58 41.4
Peaxi162Scf00308g00076 Petunia axillaris HOM05D002261 ORTHO05D002334 8.1e-06 57.0 103 32.0


User provided reference genes

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