Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09019 Striga asiatica HOM05D002903 ORTHO05D003066 6.4e-154 547.4 274 100.0
Migut.H00687 Erythranthe guttata HOM05D002903 ORTHO05D003066 5.8e-30 135.6 244 39.3
Oeu058296.1 Olea europaea HOM05D002903 ORTHO05D003066 1.0e-26 124.8 245 38.4
Oeu004513.1 Olea europaea HOM05D002903 ORTHO05D003066 1.8e-26 124.0 224 38.4
Nitab4.5_0000496g0210 Nicotiana tabacum HOM05D002903 ORTHO05D003066 9.7e-25 118.2 217 35.0
Peaxi162Scf00353g00026 Petunia axillaris HOM05D002903 ORTHO05D003066 2.4e-23 113.6 207 33.3
Dinv24393 Davidia involucrata HOM05D002903 ORTHO05D003066 9.0e-23 111.7 232 34.5
QL10p043057 Quercus lobata HOM05D002903 ORTHO05D003066 3.4e-22 109.8 243 33.7
Solyc05g056380.3 Solanum lycopersicum HOM05D002903 ORTHO05D003066 5.9e-22 109.0 233 32.6
Dinv19537 Davidia involucrata HOM05D002903 ORTHO05D003066 1.0e-21 108.2 217 34.1
Sopen05g034770 Solanum pennellii HOM05D002903 ORTHO05D003066 1.3e-21 107.8 233 32.2
Nitab4.5_0006582g0050 Nicotiana tabacum HOM05D002903 ORTHO05D003066 2.9e-21 106.7 204 36.3
PGSC0003DMG400023449 Solanum tuberosum HOM05D002903 ORTHO05D003066 8.5e-21 105.1 142 42.3
Hma1.2p1_0539F.1_g174540 Hydrangea macrophylla HOM05D002903 ORTHO05D003066 1.6e-19 100.9 252 34.1
Sabra05G0053700 Salix brachista HOM05D002903 ORTHO05D003066 3.0e-18 96.7 236 32.6
Nn1g06302 Nelumbo nucifera HOM05D002903 ORTHO05D003066 1.1e-17 94.7 208 30.8
Gorai.012G036500 Gossypium raimondii HOM05D002903 ORTHO05D003066 3.3e-17 93.2 201 35.8
Manes.12G157200 Manihot esculenta HOM05D002903 ORTHO05D003066 3.3e-17 93.2 216 31.0
Gohir.D04G032100 Gossypium hirsutum HOM05D002903 ORTHO05D003066 7.4e-17 92.0 202 35.1
CiPaw.03G119900 Carya illinoinensis HOM05D002903 ORTHO05D003066 9.7e-17 91.7 204 33.8
TWI79G0835 Tripterygium wilfordii HOM05D000001 ORTHO05D010162 2.2e-16 90.5 235 31.1
Actinidia06611 Actinidia chinensis HOM05D002903 ORTHO05D003066 3.7e-16 89.7 134 38.8
Potri.005G064700 Populus trichocarpa HOM05D002903 ORTHO05D003066 3.7e-16 89.7 203 33.0
Cfa002912 Carpinus fangiana HOM05D002903 ORTHO05D003066 6.3e-16 89.0 267 30.7
Gohir.A05G383200 Gossypium hirsutum HOM05D002903 ORTHO05D003066 6.3e-16 89.0 235 32.8
Thecc.01G134700 Theobroma cacao HOM05D002903 ORTHO05D003066 6.3e-16 89.0 204 34.8
Actinidia12224 Actinidia chinensis HOM05D002903 ORTHO05D003066 1.1e-15 88.2 202 33.7
Haze_25271 Corylus avellana HOM05D002903 ORTHO05D003066 1.1e-15 88.2 235 32.8
Haze_25272 Corylus avellana HOM05D002903 ORTHO05D003066 1.1e-15 88.2 236 33.1
Haze_25273 Corylus avellana HOM05D002903 ORTHO05D003066 1.1e-15 88.2 235 32.8
DCAR_001203 Daucus carota HOM05D002903 ORTHO05D003066 3.1e-15 86.7 213 33.3
Sabra07G0085500 Salix brachista HOM05D002903 ORTHO05D003066 6.9e-15 85.5 160 40.0
COL.COLO4_35772 Corchorus olitorius HOM05D002903 ORTHO05D003066 1.7e-13 80.9 251 30.3
TAR376G0422 Trochodendron aralioides HOM05D002903 ORTHO05D003066 1.7e-13 80.9 203 30.5
Peaxi162Scf00505g00053 Petunia axillaris HOM05D002903 ORTHO05D003066 2.2e-13 80.5 181 32.6
Phvul.001G065100 Phaseolus vulgaris HOM05D002903 ORTHO05D003066 2.2e-13 80.5 216 30.1
Potri.007G104500 Populus trichocarpa HOM05D002903 ORTHO05D003066 3.8e-13 79.7 245 29.0
GSVIVG01022345001 Vitis vinifera HOM05D002903 ORTHO05D003066 5.0e-13 79.3 267 28.5
DCAR_014329 Daucus carota HOM05D002903 ORTHO05D003066 6.5e-13 79.0 225 29.3
CAN.G1156.31 Capsicum annuum HOM05D013549 ORTHO05D003066 1.4e-12 77.8 129 38.8
Glyma.14G158800 Glycine max HOM05D002903 ORTHO05D003066 1.4e-12 77.8 215 31.2
Actinidia20071 Actinidia chinensis HOM05D002903 ORTHO05D003066 2.5e-12 77.0 187 32.1
Hma1.2p1_1125F.1_g259580 Hydrangea macrophylla HOM05D002903 ORTHO05D003066 3.2e-12 76.6 192 32.8
TAR625G1102 Trochodendron aralioides HOM05D002903 ORTHO05D003066 3.2e-12 76.6 171 32.2
Duzib187G0480 Durio zibethinus HOM05D002903 ORTHO05D003066 5.5e-12 75.9 202 31.2
Nn5g28499 Nelumbo nucifera HOM05D002903 ORTHO05D003066 1.2e-11 74.7 198 32.3
VMungo1309G1474 Vigna mungo HOM05D002903 ORTHO05D003066 1.2e-11 74.7 245 28.6
Rhsim08G0001600 Rhododendron simsii HOM05D002903 ORTHO05D003066 2.7e-11 73.6 193 32.6
Dinv41151 Davidia involucrata HOM05D002903 ORTHO05D003066 3.6e-11 73.2 191 28.8
Medtr1g029550 Medicago truncatula HOM05D002903 ORTHO05D003066 6.1e-11 72.4 162 31.5
VMungo0647G0886 Vigna mungo HOM05D002903 ORTHO05D003066 7.9e-11 72.0 222 30.2
CiPaw.04G081400 Carya illinoinensis HOM05D002903 ORTHO05D003066 1.0e-10 71.6 174 29.9
Prupe.4G272900 Prunus persica HOM05D002903 ORTHO05D003066 1.0e-10 71.6 175 33.7
Thecc.08G137400 Theobroma cacao HOM05D002903 ORTHO05D003066 1.8e-10 70.9 174 31.6
Glyma.13G036100 Glycine max HOM05D002903 ORTHO05D003066 2.3e-10 70.5 188 28.7
Potri.002G075400 Populus trichocarpa HOM05D002903 ORTHO05D003066 2.3e-10 70.5 179 29.6
Thhalv10019082m.g Eutrema salsugineum HOM05D002903 ORTHO05D003066 3.0e-10 70.1 197 32.0
Cc10_g13350 Coffea canephora HOM05D002903 ORTHO05D003066 5.1e-10 69.3 201 30.8
Dinv25773 Davidia involucrata HOM05D002903 ORTHO05D003066 5.1e-10 69.3 211 29.4
FvH4_2g15290 Fragaria vesca HOM05D002903 ORTHO05D003066 5.1e-10 69.3 172 33.1
Glyma.06G154700 Glycine max HOM05D002903 ORTHO05D003066 5.1e-10 69.3 189 30.2
VMungo1309G2413 Vigna mungo HOM05D002903 ORTHO05D003066 5.1e-10 69.3 162 31.5
FAN24G3523 Fragaria x ananassa HOM05D002903 ORTHO05D003066 6.7e-10 68.9 172 33.1
Lj7P356T43 Lonicera japonica HOM05D002903 ORTHO05D003066 6.7e-10 68.9 202 30.2
Sp1g18940 Schrenkiella parvula HOM05D002903 ORTHO05D003066 6.7e-10 68.9 190 30.0
Atru.chr4.939 Acer truncatum HOM05D002903 ORTHO05D003066 8.8e-10 68.6 206 27.7
Actinidia03429 Actinidia chinensis HOM05D002903 ORTHO05D003066 8.8e-10 68.6 162 30.9
Cpa.g.sc42.173 Carica papaya HOM05D002903 ORTHO05D003066 8.8e-10 68.6 127 35.4
Lj1g0005492 Lotus japonicus HOM05D002903 ORTHO05D003066 8.8e-10 68.6 155 32.9
BcaC08g45488 Brassica carinata HOM05D000744 ORTHO05D000332 1.1e-09 68.2 181 34.3
BolC6t38286H Brassica oleracea HOM05D002903 ORTHO05D003066 1.1e-09 68.2 181 34.3
FAN20G1459 Fragaria x ananassa HOM05D002903 ORTHO05D003066 1.1e-09 68.2 169 33.1
MSTRG.24179 Avicennia marina HOM05D002903 ORTHO05D003066 1.5e-09 67.8 203 32.0
Lj1g0027406 Lotus japonicus HOM05D002903 ORTHO05D003066 1.5e-09 67.8 196 27.6
MELO3C008433.2 Cucumis melo HOM05D002903 ORTHO05D003066 2.0e-09 67.4 169 34.9
FAN15G2216 Fragaria x ananassa HOM05D002903 ORTHO05D003066 2.0e-09 67.4 173 34.1
RcHm_v2.0_Chr6g0278041 Rosa chinensis HOM05D002903 ORTHO05D003066 2.0e-09 67.4 174 33.9
C06p31570 Brassica napus HOM05D000744 ORTHO05D000332 2.6e-09 67.0 180 32.2
Nitab4.5_0008281g0010 Nicotiana tabacum HOM05D002903 ORTHO05D003066 2.6e-09 67.0 201 28.9
Glyma.06G119800 Glycine max HOM05D002903 ORTHO05D003066 3.3e-09 66.6 181 29.8
FAN23G0840 Fragaria x ananassa HOM05D002903 ORTHO05D003066 4.4e-09 66.2 188 33.5
FAN27G1654 Fragaria x ananassa HOM05D002903 ORTHO05D003066 4.4e-09 66.2 171 33.9
Phvul.009G155800 Phaseolus vulgaris HOM05D002903 ORTHO05D003066 4.4e-09 66.2 204 29.4
Sopen06g019940 Solanum pennellii HOM05D002903 ORTHO05D003066 4.4e-09 66.2 164 29.9
Cpa.g.sc26.66 Carica papaya HOM05D002903 ORTHO05D003066 5.7e-09 65.9 126 38.9
Thecc.06G085500 Theobroma cacao HOM05D002903 ORTHO05D003066 5.7e-09 65.9 106 39.6
Aqoxy5G02305 Aquilegia oxysepala HOM05D002903 ORTHO05D003066 7.4e-09 65.5 213 28.2
FAN26G0773 Fragaria x ananassa HOM05D002903 ORTHO05D003066 7.4e-09 65.5 188 33.5
RcHm_v2.0_Chr2g0121941 Rosa chinensis HOM05D002903 ORTHO05D003066 7.4e-09 65.5 151 33.8
Sabra02G0058900 Salix brachista HOM05D002903 ORTHO05D003066 7.4e-09 65.5 199 28.1
Solyc06g059860.3 Solanum lycopersicum HOM05D002903 ORTHO05D003066 7.4e-09 65.5 164 29.3
FAN28G2835 Fragaria x ananassa HOM05D002903 ORTHO05D003066 1.3e-08 64.7 188 32.4
PGR102G0277 Punica granatum HOM05D002903 ORTHO05D003066 1.3e-08 64.7 190 31.6
FvH4_1g24530 Fragaria vesca HOM05D002903 ORTHO05D003066 2.8e-08 63.5 188 33.0
Gohir.D02G076000 Gossypium hirsutum HOM05D002903 ORTHO05D003066 2.8e-08 63.5 171 32.2
Gorai.005G085300 Gossypium raimondii HOM05D002903 ORTHO05D003066 2.8e-08 63.5 171 32.2
PGR044G0841 Punica granatum HOM05D002903 ORTHO05D003066 2.8e-08 63.5 205 27.3
Sabra05G0141500 Salix brachista HOM05D002903 ORTHO05D003066 2.8e-08 63.5 231 26.4
TPR.G28237 Trifolium pratense HOM05D002903 ORTHO05D003066 2.8e-08 63.5 162 30.2
A06p17430 Brassica napus HOM05D000744 ORTHO05D000332 3.7e-08 63.2 205 27.3
CiPaw.16G019600 Carya illinoinensis HOM05D002903 ORTHO05D003066 3.7e-08 63.2 163 30.7
Phvul.009G132400 Phaseolus vulgaris HOM05D002903 ORTHO05D003066 3.7e-08 63.2 165 30.9
ClCG08G006250 Citrullus lanatus HOM05D002903 ORTHO05D003066 4.8e-08 62.8 169 32.0
COL.COLO4_38160 Corchorus olitorius HOM05D002903 ORTHO05D003066 4.8e-08 62.8 204 28.4
Duzib041G0628 Durio zibethinus HOM05D002903 ORTHO05D003066 4.8e-08 62.8 172 31.4
FAN19G0913 Fragaria x ananassa HOM05D002903 ORTHO05D003066 4.8e-08 62.8 190 32.1
AT1G76980 Arabidopsis thaliana HOM05D002903 ORTHO05D003066 6.3e-08 62.4 226 28.3
Lalb_Chr10g0101441 Lupinus albus HOM05D002903 ORTHO05D003066 6.3e-08 62.4 167 29.9
A07p28150 Brassica napus HOM05D002903 ORTHO05D003066 8.2e-08 62.0 180 31.7
C05p20270 Brassica napus HOM05D000744 ORTHO05D000332 8.2e-08 62.0 218 29.4
BraA07t30459Z Brassica rapa HOM05D000744 ORTHO05D003066 8.2e-08 62.0 180 31.7
CsaV3_6G031200 Cucumis sativus L. HOM05D002903 ORTHO05D003066 8.2e-08 62.0 170 34.7
BraA06t24841Z Brassica rapa HOM05D002903 ORTHO05D003066 1.1e-07 61.6 186 28.5
Eucgr.J01342 Eucalyptus grandis HOM05D002903 ORTHO05D003066 1.1e-07 61.6 248 26.6
Thhalv10008635m.g Eutrema salsugineum HOM05D002903 ORTHO05D003066 1.1e-07 61.6 159 31.4
Medtr3g096450 Medicago truncatula HOM05D002903 ORTHO05D003066 1.1e-07 61.6 165 29.1
Thecc.06G085300 Theobroma cacao HOM05D002903 ORTHO05D003066 1.1e-07 61.6 105 38.1
Thecc.06G085900 Theobroma cacao HOM05D002903 ORTHO05D003066 1.1e-07 61.6 105 38.1
BolC6t40142H Brassica oleracea HOM05D002903 ORTHO05D003066 1.8e-07 60.8 181 31.5
CSS0044741 Camellia sinensis var. sinensis HOM05D002903 ORTHO05D003066 1.8e-07 60.8 210 29.0
Lalb_Chr08g0240931 Lupinus albus HOM05D002903 ORTHO05D003066 1.8e-07 60.8 178 29.8
AL2G37140 Arabidopsis lyrata HOM05D002903 ORTHO05D003066 2.4e-07 60.5 229 28.8
AL402U10010 Arabidopsis lyrata HOM05D002903 ORTHO05D003066 2.4e-07 60.5 229 28.8
BcaC05g26046 Brassica carinata HOM05D002903 ORTHO05D003066 2.4e-07 60.5 198 29.8
BolC5t30721H Brassica oleracea HOM05D002903 ORTHO05D003066 2.4e-07 60.5 200 29.5
Duzib093G1863 Durio zibethinus HOM05D002903 ORTHO05D003066 2.4e-07 60.5 177 29.4
Psat5g061200 Pisum sativum HOM05D009467 ORTHO05D010918 2.4e-07 60.5 129 36.4
HanXRQChr11g0322701 Helianthus annuus HOM05D002903 ORTHO05D003066 3.1e-07 60.1 121 33.9
QL09p029695 Quercus lobata HOM05D002903 ORTHO05D003066 3.1e-07 60.1 213 26.8
BcaB02g07090 Brassica carinata HOM05D002903 ORTHO05D003066 4.1e-07 59.7 207 29.5
BcaB07g32128 Brassica carinata HOM05D002903 ORTHO05D003066 4.1e-07 59.7 201 31.3
Gohir.A02G112000 Gossypium hirsutum HOM05D002903 ORTHO05D003066 5.3e-07 59.3 163 28.8
Haze_17666 Corylus avellana HOM05D002903 ORTHO05D003066 6.9e-07 58.9 195 27.2
Sp5g32140 Schrenkiella parvula HOM05D002903 ORTHO05D003066 6.9e-07 58.9 154 31.2
CARHR021780 Cardamine hirsuta HOM05D002903 ORTHO05D003066 9.1e-07 58.5 194 28.9
MBI03_g20844_MAGBIO Magnolia biondii HOM05D002903 ORTHO05D003066 9.1e-07 58.5 178 29.2
Manes.02G172300 Manihot esculenta HOM05D002903 ORTHO05D003066 9.1e-07 58.5 178 29.8
THA.LOC104812056 Tarenaya hassleriana HOM05D002903 ORTHO05D003066 9.1e-07 58.5 167 29.9
CSS0044801 Camellia sinensis var. sinensis HOM05D002903 ORTHO05D003066 1.2e-06 58.2 169 28.4
Gorai.013G109100 Gossypium raimondii HOM05D002903 ORTHO05D003066 1.2e-06 58.2 168 30.4
Glyma.04G243500 Glycine max HOM05D002903 ORTHO05D003066 1.5e-06 57.8 185 30.3
Psat6g040160 Pisum sativum HOM05D002903 ORTHO05D003066 1.5e-06 57.8 170 28.2
Aa31LG4G7030 Aethionema arabicum HOM05D002903 ORTHO05D003066 2.0e-06 57.4 203 29.1
Ca_16630_v3 Cicer arietinum L. HOM05D002903 ORTHO05D003066 2.0e-06 57.4 164 29.9
BraA07t31783Z Brassica rapa HOM05D002903 ORTHO05D003066 2.6e-06 57.0 157 29.9
Eucgr.J01339 Eucalyptus grandis HOM05D002903 ORTHO05D003066 2.6e-06 57.0 247 25.5
HPP92_004461 Vanilla planifolia HOM05D025440 ORTHO05D003066 2.6e-06 57.0 156 32.1
arahy.Tifrunner.gnm1.ann1.4FGN3C Arachis hypogaea HOM05D002903 ORTHO05D003066 3.4e-06 56.6 152 30.9
Gohir.D03G062500 Gossypium hirsutum HOM05D002903 ORTHO05D003066 3.4e-06 56.6 167 29.3
Nitab4.5_0002270g0020 Nicotiana tabacum HOM05D002903 ORTHO05D003066 3.4e-06 56.6 187 26.7
PGR042G1875 Punica granatum HOM05D002903 ORTHO05D003066 3.4e-06 56.6 162 30.2
TWI60G0469 Tripterygium wilfordii HOM05D002903 ORTHO05D003066 3.4e-06 56.6 174 31.0
Carub.0002s2388 Capsella rubella HOM05D002903 ORTHO05D003066 4.5e-06 56.2 182 31.3
arahy.Tifrunner.gnm1.ann1.TSX9B2 Arachis hypogaea HOM05D002903 ORTHO05D003066 5.9e-06 55.8 147 30.6
CARHR070490 Cardamine hirsuta HOM05D002903 ORTHO05D003066 5.9e-06 55.8 189 29.1
Cfa018400 Carpinus fangiana HOM05D002903 ORTHO05D003066 5.9e-06 55.8 195 27.2
HanXRQChr10g0309091 Helianthus annuus HOM05D002903 ORTHO05D003066 5.9e-06 55.8 218 28.4
Lsat_1_v5_gn_0_33040 Lactuca sativa HOM05D002903 ORTHO05D003066 5.9e-06 55.8 156 33.3
Manes.18G084700 Manihot esculenta HOM05D002903 ORTHO05D003066 5.9e-06 55.8 163 28.2
Sed0027661 Sechium edule HOM05D002903 ORTHO05D003066 5.9e-06 55.8 156 30.1
Oeu001551.1 Olea europaea HOM05D002903 ORTHO05D003066 7.7e-06 55.5 172 27.9
Oeu047153.1 Olea europaea HOM05D002903 ORTHO05D003066 7.7e-06 55.5 204 30.4


User provided reference genes

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