Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09018 Striga asiatica HOM05D007225 ORTHO05D009062 4.8e-219 764.2 390 100.0
Migut.H00686 Erythranthe guttata HOM05D007225 ORTHO05D009062 2.2e-54 217.2 164 73.8
MSTRG.23466 Avicennia marina HOM05D007225 ORTHO05D009062 3.0e-48 196.8 164 66.5
Dinv24394 Davidia involucrata HOM05D007225 ORTHO05D009062 3.1e-45 186.8 164 60.4
vmacro12787 Vaccinium macrocarpon HOM05D007225 ORTHO05D009062 8.9e-40 168.7 164 54.9
Cc07_g18810 Coffea canephora HOM05D007225 ORTHO05D009062 2.0e-39 167.5 164 57.3
Hma1.2p1_0539F.1_g174530 Hydrangea macrophylla HOM05D007225 ORTHO05D009062 3.4e-39 166.8 169 56.2
CSS0045766 Camellia sinensis var. sinensis HOM05D007225 ORTHO05D009062 3.7e-38 163.3 164 53.0
Oeu058297.1 Olea europaea HOM05D007225 ORTHO05D009062 7.8e-36 155.6 164 54.9
PGSC0003DMG400012541 Solanum tuberosum HOM05D007225 ORTHO05D009062 1.0e-35 155.2 168 54.2
HanXRQChr12g0380581 Helianthus annuus HOM05D007225 ORTHO05D009062 8.6e-35 152.1 168 49.4
Ciclev10002244m.g Citrus clementina HOM05D007225 ORTHO05D009062 2.5e-34 150.6 167 52.1
CiPaw.04G081200 Carya illinoinensis HOM05D007225 ORTHO05D009062 4.7e-33 146.4 167 48.5
Lsat_1_v5_gn_5_68521 Lactuca sativa HOM05D007225 ORTHO05D009062 1.0e-32 145.2 164 49.4
Solyc01g105570.4 Solanum lycopersicum HOM05D007225 ORTHO05D009062 1.0e-32 145.2 168 51.2
ECA233G3017 Erigeron canadensis HOM05D007225 ORTHO05D000131 5.2e-32 142.9 164 50.6
Sopen01g048040 Solanum pennellii HOM05D007225 ORTHO05D009062 6.8e-32 142.5 168 51.2
Rhsim10G0132500 Rhododendron simsii HOM05D007225 ORTHO05D009062 8.9e-32 142.1 127 56.7
COL.COLO4_35773 Corchorus olitorius HOM05D007225 ORTHO05D009062 2.0e-31 141.0 167 50.9
Atru.chr4.938 Acer truncatum HOM05D007225 ORTHO05D009062 3.4e-31 140.2 167 44.9
TAR625G0602 Trochodendron aralioides HOM05D007225 ORTHO05D009062 1.3e-30 138.3 174 44.3
Cpa.g.sc42.174 Carica papaya HOM05D007225 ORTHO05D009062 1.7e-30 137.9 169 46.7
Gohir.D10G108600 Gossypium hirsutum HOM05D007225 ORTHO05D009062 2.9e-30 137.1 165 47.9
Duzib187G1928 Durio zibethinus HOM05D007225 ORTHO05D009062 3.7e-30 136.7 166 49.4
Nitab4.5_0000386g0080 Nicotiana tabacum HOM05D007225 ORTHO05D009062 1.1e-29 135.2 168 47.0
Potri.005G064800 Populus trichocarpa HOM05D007225 ORTHO05D009062 1.1e-29 135.2 167 46.7
Potri.005G064951 Populus trichocarpa HOM05D007225 ORTHO05D009062 1.1e-29 135.2 167 46.7
Thecc.01G134800 Theobroma cacao HOM05D007225 ORTHO05D009062 4.1e-29 133.3 164 47.0
FAN12G1161 Fragaria x ananassa HOM05D007225 ORTHO05D009062 7.0e-29 132.5 164 46.3
Hund04436 Selenicereus undatus HOM05D007225 ORTHO05D009062 7.0e-29 132.5 174 43.1
Gorai.011G119000 Gossypium raimondii HOM05D007225 ORTHO05D009062 9.2e-29 132.1 165 47.9
Prupe.4G273000 Prunus persica HOM05D007225 ORTHO05D009062 9.2e-29 132.1 166 44.6
FvH4_4g13030 Fragaria vesca HOM05D007225 ORTHO05D009062 2.7e-28 130.6 164 46.3
Sabra05G0053800 Salix brachista HOM05D007225 ORTHO05D009062 2.7e-28 130.6 167 44.9
QL10p043051 Quercus lobata HOM05D007225 ORTHO05D009062 3.5e-28 130.2 209 41.1
RcHm_v2.0_Chr4g0412751 Rosa chinensis HOM05D007225 ORTHO05D009062 4.6e-28 129.8 164 44.5
Lalb_Chr13g0296631 Lupinus albus HOM05D007225 ORTHO05D009062 6.0e-28 129.4 166 47.6
Ca_17629_v3 Cicer arietinum L. HOM05D007225 ORTHO05D009062 7.8e-28 129.0 164 45.1
FAN07G2982 Fragaria x ananassa HOM05D007225 ORTHO05D009062 7.8e-28 129.0 164 44.5
MD17G1201700 Malus domestica HOM05D007225 ORTHO05D009062 7.8e-28 129.0 166 44.0
Sc07g0001760 Simmondsia chinensis HOM05D007225 ORTHO05D009062 1.7e-27 127.9 164 44.5
TPR.G37342 Trifolium pratense HOM05D007225 ORTHO05D009062 3.9e-27 126.7 164 44.5
Psat7g045080 Pisum sativum HOM05D007225 ORTHO05D009062 1.5e-26 124.8 164 45.7
Lj4g0008022 Lotus japonicus HOM05D007225 ORTHO05D009062 5.6e-26 122.9 165 45.5
DCAR_014328 Daucus carota HOM05D007225 ORTHO05D009062 7.3e-26 122.5 165 45.5
CANSAT01G2273 Cannabis sativa HOM05D007225 ORTHO05D009062 3.1e-24 117.1 165 46.7
unitig_699.g19729 Utricularia gibba HOM05D007225 ORTHO05D009062 3.1e-24 117.1 168 42.9
TAR381G0670 Trochodendron aralioides HOM05D007225 ORTHO05D009062 5.2e-24 116.3 175 38.9
Eucgr.I00189 Eucalyptus grandis HOM05D007225 ORTHO05D009062 8.9e-24 115.5 164 43.9
PSO528G0250 Papaver somniferum HOM05D007225 ORTHO05D009062 1.5e-23 114.8 187 39.6
PSO170G5625 Papaver somniferum HOM05D007225 ORTHO05D009062 2.0e-23 114.4 189 41.8
CsaV3_2G019450 Cucumis sativus L. HOM05D007225 ORTHO05D009062 7.5e-23 112.5 177 40.7
Nitab4.5_0008206g0020 Nicotiana tabacum HOM05D007225 ORTHO05D009062 1.3e-22 111.7 142 50.0
AUR62003589 Chenopodium quinoa HOM05D007225 ORTHO05D009062 3.7e-22 110.2 179 41.9
Sed0013127 Sechium edule HOM05D007225 ORTHO05D009062 1.9e-21 107.8 164 42.7
AUR62017902 Chenopodium quinoa HOM05D007225 ORTHO05D009062 2.4e-21 107.5 177 41.2
AUR62043562 Chenopodium quinoa HOM05D007225 ORTHO05D009062 2.4e-21 107.5 177 41.2
RcHm_v2.0_Chr4g0412711 Rosa chinensis HOM05D007225 ORTHO05D009062 4.1e-21 106.7 106 50.0
Peaxi162Scf00172g00611 Petunia axillaris HOM05D007225 ORTHO05D009062 7.1e-21 105.9 86 61.6
ATR0709G077 Amborella trichopoda HOM05D007225 ORTHO05D009062 1.6e-20 104.8 193 36.3
Nitab4.5_0010123g0010 Nicotiana tabacum HOM05D007225 ORTHO05D009062 6.0e-20 102.8 142 46.5
MBI06_g27455_MAGBIO Magnolia biondii HOM05D007225 ORTHO05D009062 7.8e-20 102.4 173 38.2
Manes.12G157300 Manihot esculenta HOM05D007225 ORTHO05D009062 1.7e-19 101.3 183 38.3
ClCG02G000390 Citrullus lanatus HOM05D007225 ORTHO05D009062 2.3e-19 100.9 164 39.6
Gohir.A10G156900 Gossypium hirsutum HOM05D007225 ORTHO05D009062 3.9e-19 100.1 100 50.0
GSVIVG01022343001 Vitis vinifera HOM05D007225 ORTHO05D009062 6.6e-19 99.4 84 54.8
Glyma.05G192800 Glycine max HOM05D007225 ORTHO05D009062 8.6e-19 99.0 173 38.7
Medtr8g093850 Medicago truncatula HOM05D007225 ORTHO05D009062 1.9e-18 97.8 100 48.0
MELO3C023228.2 Cucumis melo HOM05D007225 ORTHO05D009062 2.5e-18 97.4 151 41.7
BraA06t26013Z Brassica rapa HOM05D007225 ORTHO05D009062 3.3e-18 97.1 166 39.8
A06p30630 Brassica napus HOM05D007225 ORTHO05D009062 4.3e-18 96.7 166 39.2
Phvul.002G273400 Phaseolus vulgaris HOM05D007225 ORTHO05D009062 4.3e-18 96.7 167 40.1
HPP92_025180 Vanilla planifolia HOM05D007225 ORTHO05D009062 2.8e-17 94.0 186 34.4
AT5G64010 Arabidopsis thaliana HOM05D007225 ORTHO05D009062 3.6e-17 93.6 164 36.0
Aqoxy6G00280 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 1.1e-16 92.0 127 39.4
Carub.0008s2479 Capsella rubella HOM05D007225 ORTHO05D009062 1.1e-16 92.0 164 36.6
Ah.02g121670 Amaranthus hybridus HOM05D007225 ORTHO05D009062 2.3e-16 90.9 111 45.9
Thhalv10004850m.g Eutrema salsugineum HOM05D007225 ORTHO05D009062 2.3e-16 90.9 164 37.2
AL8G41270 Arabidopsis lyrata HOM05D007225 ORTHO05D009062 3.1e-16 90.5 164 37.2
DCAR_010250 Daucus carota HOM05D007225 ORTHO05D009062 4.0e-16 90.1 169 34.9
Nn5g28498 Nelumbo nucifera HOM05D007225 ORTHO05D009062 4.0e-16 90.1 111 44.1
Aqoxy5G02304 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 6.8e-16 89.4 186 34.9
CARHR277930 Cardamine hirsuta HOM05D007225 ORTHO05D002208 6.8e-16 89.4 164 38.4
Sp2g27080 Schrenkiella parvula HOM05D007225 ORTHO05D009062 6.8e-16 89.4 164 37.8
PGR119G1418 Punica granatum HOM05D007225 ORTHO05D009062 8.9e-16 89.0 163 38.0
EL10Ac1g01390 Beta vulgaris HOM05D007225 ORTHO05D009062 2.0e-15 87.8 220 34.5
C03p62330 Brassica napus HOM05D007225 ORTHO05D009062 4.4e-15 86.7 164 36.0
BcaC01g02654 Brassica carinata HOM05D007225 ORTHO05D009062 9.9e-15 85.5 164 35.4
BolC3t18495H Brassica oleracea HOM05D007225 ORTHO05D009062 9.9e-15 85.5 164 35.4
Carub.0003s2889 Capsella rubella HOM05D007225 ORTHO05D009062 1.3e-14 85.1 81 48.1
VMungo0251G1761 Vigna mungo HOM05D007225 ORTHO05D009062 1.3e-14 85.1 161 37.9
Aa31LG1G17910 Aethionema arabicum HOM05D007225 ORTHO05D009062 1.7e-14 84.7 166 35.5
Glyma.08G000900 Glycine max HOM05D007225 ORTHO05D009062 2.3e-11 74.3 165 38.2
Os04g0693250 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 5.1e-11 73.2 175 31.4
AagrBONN_evm.TU.Sc2ySwM_368.986 Anthoceros agrestis HOM05D007225 ORTHO05D009062 6.6e-11 72.8 180 30.0
Nn1g06303 Nelumbo nucifera HOM05D007225 ORTHO05D009062 3.6e-09 67.0 174 31.6
THA.LOC104818429 Tarenaya hassleriana HOM05D007225 ORTHO05D009062 1.8e-08 64.7 154 29.9
Mapoly0095s0053 Marchantia polymorpha HOM05D007225 ORTHO05D009062 4.0e-08 63.5 144 34.0
Pp3c8_18500 Physcomitrium patens HOM05D007225 ORTHO05D009062 1.3e-06 58.5 121 32.2
Zm00001eb434540 Zea mays HOM05D007225 ORTHO05D009062 1.7e-06 58.2 123 35.8
Peaxi162Scf00172g00068 Petunia axillaris HOM05D007225 ORTHO05D009062 4.9e-06 56.6 78 50.0
arahy.Tifrunner.gnm1.ann1.ST1FFJ Arachis hypogaea HOM05D007225 ORTHO05D009062 8.4e-06 55.8 168 30.4


User provided reference genes

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