Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G08981 Striga asiatica HOM05D000121 ORTHO05D402964 7.6e-55 216.9 105 100.0
SGA_v2.0_scaffold1G00665 Striga asiatica HOM05D000121 ORTHO05D000102 1.4e-16 89.7 47 91.5
CsaV3_6G007310 Cucumis sativus L. HOM05D000121 ORTHO05D000102 1.2e-10 70.1 47 66.0
Migut.N02234 Erythranthe guttata HOM05D000121 ORTHO05D000102 5.7e-10 67.8 48 56.2
MSTRG.18358 Avicennia marina HOM05D000121 ORTHO05D000102 7.5e-10 67.4 47 63.8
ClCG06G001370 Citrullus lanatus HOM05D000121 ORTHO05D000102 7.5e-10 67.4 47 63.8
Dinv19262 Davidia involucrata HOM05D000121 ORTHO05D000102 7.5e-10 67.4 47 63.8
Phvul.001G165500 Phaseolus vulgaris HOM05D000121 ORTHO05D000102 7.5e-10 67.4 47 66.0
SalBow6G6952 Salvia bowleyana HOM05D000121 ORTHO05D000102 7.5e-10 67.4 47 61.7
Sed0021131 Sechium edule HOM05D000121 ORTHO05D000102 7.5e-10 67.4 44 65.9
Lj5g0010778 Lotus japonicus HOM05D000121 ORTHO05D000102 1.3e-09 66.6 47 63.8
GSVIVG01028440001 Vitis vinifera HOM05D000121 ORTHO05D000102 1.3e-09 66.6 47 61.7
CSS0022602 Camellia sinensis var. sinensis HOM05D000121 ORTHO05D000102 1.7e-09 66.2 47 63.8
DCAR_012594 Daucus carota HOM05D000121 ORTHO05D000102 1.7e-09 66.2 47 61.7
Lj2A1142T80 Lonicera japonica HOM05D000121 ORTHO05D000102 2.2e-09 65.9 47 61.7
Sed0009600 Sechium edule HOM05D000121 ORTHO05D000102 2.2e-09 65.9 47 61.7
Potri.002G255800 Populus trichocarpa HOM05D000121 ORTHO05D000102 2.8e-09 65.5 47 59.6
CANSAT01G0349 Cannabis sativa HOM05D000121 ORTHO05D000102 3.7e-09 65.1 47 61.7
MELO3C022395.2 Cucumis melo HOM05D000121 ORTHO05D000102 3.7e-09 65.1 47 59.6
Sabra02G0194400 Salix brachista HOM05D000121 ORTHO05D000102 3.7e-09 65.1 47 61.7
VMungo0720G1428 Vigna mungo HOM05D000121 ORTHO05D000102 3.7e-09 65.1 47 59.6
Potri.014G193400 Populus trichocarpa HOM05D000121 ORTHO05D000102 4.9e-09 64.7 47 63.8
TAR636G1549 Trochodendron aralioides HOM05D000121 ORTHO05D000102 4.9e-09 64.7 47 57.4
CiPaw.03G271700 Carya illinoinensis HOM05D000121 ORTHO05D000102 6.3e-09 64.3 47 59.6
Ciclev10018479m.g Citrus clementina HOM05D000121 ORTHO05D000102 6.3e-09 64.3 47 57.4
Dinv43061 Davidia involucrata HOM05D000121 ORTHO05D000102 6.3e-09 64.3 47 59.6
Migut.D00484 Erythranthe guttata HOM05D000121 ORTHO05D000102 6.3e-09 64.3 47 59.6
arahy.Tifrunner.gnm1.ann1.BGTX42 Arachis hypogaea HOM05D000121 ORTHO05D000102 8.3e-09 63.9 47 59.6
arahy.Tifrunner.gnm1.ann1.JLL8QA Arachis hypogaea HOM05D000121 ORTHO05D000102 8.3e-09 63.9 47 59.6
QL09p042024 Quercus lobata HOM05D000121 ORTHO05D000102 8.3e-09 63.9 47 57.4
THA.LOC104801121 Tarenaya hassleriana HOM05D000121 ORTHO05D000102 8.3e-09 63.9 47 57.4
THA.LOC104814535 Tarenaya hassleriana HOM05D000121 ORTHO05D000102 8.3e-09 63.9 47 59.6
unitig_22.g6308 Utricularia gibba HOM05D000121 ORTHO05D000102 8.3e-09 63.9 47 63.8
COL.COLO4_20938 Corchorus olitorius HOM05D000121 ORTHO05D000102 1.1e-08 63.5 47 55.3
Lalb_Chr01g0019481 Lupinus albus HOM05D000121 ORTHO05D000102 1.1e-08 63.5 47 63.8
Prupe.8G214600 Prunus persica HOM05D000121 ORTHO05D000102 1.1e-08 63.5 47 59.6
Thecc.01G249100 Theobroma cacao HOM05D000121 ORTHO05D000102 1.1e-08 63.5 47 59.6
VMungo1383G3012 Vigna mungo HOM05D000121 ORTHO05D000102 1.1e-08 63.5 47 57.4
Manes.12G038500 Manihot esculenta HOM05D000121 ORTHO05D000102 1.4e-08 63.2 47 59.6
Manes.13G039000 Manihot esculenta HOM05D000121 ORTHO05D000102 1.4e-08 63.2 47 61.7
Eucgr.K01420 Eucalyptus grandis HOM05D000121 ORTHO05D000102 1.8e-08 62.8 47 55.3
Nitab4.5_0000385g0010 Nicotiana tabacum HOM05D000121 ORTHO05D000102 1.8e-08 62.8 47 59.6
Rhsim01G0259800 Rhododendron simsii HOM05D000121 ORTHO05D000102 1.8e-08 62.8 47 59.6
TWI75G1075 Tripterygium wilfordii HOM05D000121 ORTHO05D000102 1.8e-08 62.8 47 57.4
vmacro14791 Vaccinium macrocarpon HOM05D000121 ORTHO05D000102 1.8e-08 62.8 47 57.4
Nitab4.5_0002435g0050 Nicotiana tabacum HOM05D000121 ORTHO05D000102 2.4e-08 62.4 47 59.6
Sc17g0003070 Simmondsia chinensis HOM05D000121 ORTHO05D000102 2.4e-08 62.4 47 55.3
Duzib211G0391 Durio zibethinus HOM05D000121 ORTHO05D000102 3.1e-08 62.0 47 59.6
Glyma.13G127500 Glycine max HOM05D000121 ORTHO05D000102 4.1e-08 61.6 47 59.6
Lsat_1_v5_gn_5_181080 Lactuca sativa HOM05D000121 ORTHO05D000102 4.1e-08 61.6 44 63.6
Nn1g03004 Nelumbo nucifera HOM05D000121 ORTHO05D000102 4.1e-08 61.6 47 55.3
SGA_v2.0_scaffold42G16168 Striga asiatica HOM05D000121 ORTHO05D000102 4.1e-08 61.6 47 63.8
Aqoxy5G00120 Aquilegia oxysepala HOM05D000121 ORTHO05D000102 5.4e-08 61.2 47 53.2
Cc01_g17730 Coffea canephora HOM05D000121 ORTHO05D000102 5.4e-08 61.2 47 55.3
Glyma.19G169000 Glycine max HOM05D000121 ORTHO05D000102 5.4e-08 61.2 47 59.6
SalBow4G0617 Salvia bowleyana HOM05D000121 ORTHO05D000102 5.4e-08 61.2 47 57.4
CAN.G496.3 Capsicum annuum HOM05D000121 ORTHO05D000102 7.0e-08 60.8 47 57.4
Duzib138G0653 Durio zibethinus HOM05D000121 ORTHO05D000102 7.0e-08 60.8 47 59.6
TAR349G0002 Trochodendron aralioides HOM05D000121 ORTHO05D000102 7.0e-08 60.8 48 54.2
Haze_24715 Corylus avellana HOM05D000121 ORTHO05D000102 9.2e-08 60.5 47 57.4
DCAR_000468 Daucus carota HOM05D000121 ORTHO05D000102 9.2e-08 60.5 48 54.2
DCAR_000571 Daucus carota HOM05D000121 ORTHO05D000102 9.2e-08 60.5 48 54.2
Glyma.03G167800 Glycine max HOM05D000121 ORTHO05D000102 9.2e-08 60.5 47 59.6
Phvul.007G153800 Phaseolus vulgaris HOM05D000121 ORTHO05D000102 1.2e-07 60.1 47 59.6
Solyc09g064440.4 Solanum lycopersicum HOM05D000121 ORTHO05D000102 1.2e-07 60.1 47 57.4
Sopen09g025580 Solanum pennellii HOM05D000121 ORTHO05D000102 1.2e-07 60.1 47 57.4
DCAR_018525 Daucus carota HOM05D000121 ORTHO05D000102 2.0e-07 59.3 48 58.3
PGSC0003DMG400008576 Solanum tuberosum HOM05D000121 ORTHO05D000102 2.0e-07 59.3 47 55.3
Actinidia37558 Actinidia chinensis HOM05D000121 ORTHO05D000102 2.7e-07 58.9 47 55.3
MSTRG.21455 Avicennia marina HOM05D000121 ORTHO05D000102 2.7e-07 58.9 47 61.7
Duzib133G1411 Durio zibethinus HOM05D000121 ORTHO05D000102 2.7e-07 58.9 47 55.3
Cpa.g.sc87.40 Carica papaya HOM05D000121 ORTHO05D000102 3.5e-07 58.5 47 59.6
Hund18290 Selenicereus undatus HOM05D000121 ORTHO05D000102 3.5e-07 58.5 47 57.4
TAR362G0555 Trochodendron aralioides HOM05D000121 ORTHO05D000102 3.5e-07 58.5 48 52.1
vmacro02712 Vaccinium macrocarpon HOM05D000121 ORTHO05D000102 3.5e-07 58.5 49 55.1
Lj1A75T46 Lonicera japonica HOM05D000121 ORTHO05D000102 4.5e-07 58.2 48 56.2
Peaxi162Scf00043g00247 Petunia axillaris HOM05D000121 ORTHO05D000102 4.5e-07 58.2 47 55.3
Ca_09643_v3 Cicer arietinum L. HOM05D000121 ORTHO05D000102 5.9e-07 57.8 50 56.0
PSO764G0025 Papaver somniferum HOM05D000121 ORTHO05D000102 5.9e-07 57.8 47 57.4
PGR044G0294 Punica granatum HOM05D000121 ORTHO05D000102 5.9e-07 57.8 44 59.1
arahy.Tifrunner.gnm1.ann1.6EDB07 Arachis hypogaea HOM05D000121 ORTHO05D000102 7.7e-07 57.4 47 53.2
arahy.Tifrunner.gnm1.ann1.XSQK7Q Arachis hypogaea HOM05D000121 ORTHO05D000102 7.7e-07 57.4 47 53.2
Nn3g19811 Nelumbo nucifera HOM05D000121 ORTHO05D000102 7.7e-07 57.4 45 57.8
Carub.0001s0327 Capsella rubella HOM05D000121 ORTHO05D000102 1.0e-06 57.0 48 56.2
Medtr1g069450 Medicago truncatula HOM05D000121 ORTHO05D000102 1.0e-06 57.0 48 54.2
FAN15G2278 Fragaria x ananassa HOM05D000121 ORTHO05D000102 1.3e-06 56.6 47 55.3
FAN27G3509 Fragaria x ananassa HOM05D000121 ORTHO05D000102 1.3e-06 56.6 47 55.3
Gohir.A11G134000 Gossypium hirsutum HOM05D000121 ORTHO05D000102 1.3e-06 56.6 45 60.0
Gohir.D11G140100 Gossypium hirsutum HOM05D000121 ORTHO05D000102 1.3e-06 56.6 45 60.0
Gorai.007G150300 Gossypium raimondii HOM05D000121 ORTHO05D000102 1.3e-06 56.6 45 60.0
RcHm_v2.0_Chr6g0286471 Rosa chinensis HOM05D000121 ORTHO05D000102 1.3e-06 56.6 47 55.3
AL1G13720 Arabidopsis lyrata HOM05D000121 ORTHO05D000102 1.7e-06 56.2 48 54.2
AT1G04120 Arabidopsis thaliana HOM05D000121 ORTHO05D000102 1.7e-06 56.2 48 56.2
BcaC05g24468 Brassica carinata HOM05D000121 ORTHO05D000102 2.3e-06 55.8 48 52.1
Rhsim13G0040300 Rhododendron simsii HOM05D000121 ORTHO05D000102 2.3e-06 55.8 49 53.1
Atru.chr5.1963 Acer truncatum HOM05D000121 ORTHO05D000102 2.9e-06 55.5 44 56.8
FvH4_2g20350 Fragaria vesca HOM05D000121 ORTHO05D000102 2.9e-06 55.5 47 53.2
FAN24G3134 Fragaria x ananassa HOM05D000121 ORTHO05D000102 2.9e-06 55.5 47 53.2
MBI10_g16794_MAGBIO Magnolia biondii HOM05D000121 ORTHO05D000102 2.9e-06 55.5 47 55.3
MD05G1187600 Malus domestica HOM05D000121 ORTHO05D000102 2.9e-06 55.5 47 53.2
Aa31LG1G20720 Aethionema arabicum HOM05D000121 ORTHO05D000102 3.8e-06 55.1 48 54.2
Medtr7g098690 Medicago truncatula HOM05D000121 ORTHO05D000102 3.8e-06 55.1 48 56.2
Gohir.D07G159300 Gossypium hirsutum HOM05D000121 ORTHO05D000102 6.6e-06 54.3 47 55.3
Gorai.001G182400 Gossypium raimondii HOM05D000121 ORTHO05D000102 6.6e-06 54.3 47 55.3
MD10G1175300 Malus domestica HOM05D000121 ORTHO05D000102 6.6e-06 54.3 47 51.1
TAR365G0749 Trochodendron aralioides HOM05D000121 ORTHO05D000102 6.6e-06 54.3 40 57.5
CDE02G1041 Ceratophyllum demersum HOM05D000121 ORTHO05D000102 8.6e-06 53.9 44 52.3
Ca_08749_v3 Cicer arietinum L. HOM05D000121 ORTHO05D000102 8.6e-06 53.9 48 56.2
Gohir.A07G153100 Gossypium hirsutum HOM05D000121 ORTHO05D000102 8.6e-06 53.9 47 53.2
Lj1g0025205 Lotus japonicus HOM05D000121 ORTHO05D000102 8.6e-06 53.9 45 62.2
Lalb_Chr02g0152771 Lupinus albus HOM05D000121 ORTHO05D000102 8.6e-06 53.9 48 56.2
Psat3g053400 Pisum sativum HOM05D000121 ORTHO05D000102 8.6e-06 53.9 51 49.0


User provided reference genes

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