Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G08957 Striga asiatica HOM05D008049 ORTHO05D010198 6.6e-105 384.0 191 100.0
Migut.H00830 Erythranthe guttata HOM05D008049 ORTHO05D010198 8.8e-33 144.4 282 38.7
MD15G1137300 Malus domestica HOM05D008049 ORTHO05D010198 7.4e-24 114.8 127 47.2
Actinidia16520 Actinidia chinensis HOM05D008049 ORTHO05D010198 2.8e-23 112.8 128 45.3
unitig_899.g15147 Utricularia gibba HOM05D008049 ORTHO05D010198 4.8e-23 112.1 123 48.8
Dinv30334 Davidia involucrata HOM05D008049 ORTHO05D010198 7.7e-21 104.8 117 51.3
Prupe.4G279900 Prunus persica HOM05D008049 ORTHO05D010198 1.7e-20 103.6 126 46.0
Potri.005G069900 Populus trichocarpa HOM05D008049 ORTHO05D010198 1.5e-19 100.5 110 50.0
Gohir.A05G382200 Gossypium hirsutum HOM05D008049 ORTHO05D010198 3.2e-19 99.4 157 36.9
TAR381G0470 Trochodendron aralioides HOM05D008049 ORTHO05D010198 4.2e-19 99.0 111 46.8
Sabra05G0056900 Salix brachista HOM05D008049 ORTHO05D010198 5.5e-19 98.6 110 49.1
CiPaw.03G116500 Carya illinoinensis HOM05D008049 ORTHO05D010198 7.2e-19 98.2 126 46.0
Gohir.D04G033000 Gossypium hirsutum HOM05D008049 ORTHO05D010198 9.4e-19 97.8 157 36.3
Hma1.2p1_0134F.1_g061550 Hydrangea macrophylla HOM05D008049 ORTHO05D010198 9.4e-19 97.8 107 47.7
PSO170G0957 Papaver somniferum HOM05D008049 ORTHO05D010198 2.1e-18 96.7 108 49.1
PSO528G0188 Papaver somniferum HOM05D008049 ORTHO05D010198 2.1e-18 96.7 108 49.1
TWI31G1063 Tripterygium wilfordii HOM05D008049 ORTHO05D010198 2.1e-18 96.7 117 48.7
COL.COLO4_12107 Corchorus olitorius HOM05D008049 ORTHO05D010198 6.1e-18 95.1 105 47.6
Thecc.01G140900 Theobroma cacao HOM05D008049 ORTHO05D010198 1.0e-17 94.4 105 45.7
Duzib147G0405 Durio zibethinus HOM05D008049 ORTHO05D010198 1.8e-17 93.6 105 46.7
Cpa.g.sc37.30 Carica papaya HOM05D008049 ORTHO05D010198 2.3e-17 93.2 152 41.4
QL10p040433 Quercus lobata HOM05D008049 ORTHO05D010198 2.3e-17 93.2 109 44.0
Gorai.012G037400 Gossypium raimondii HOM05D008049 ORTHO05D010198 3.0e-17 92.8 103 45.6
TWI79G0517 Tripterygium wilfordii HOM05D008049 ORTHO05D010198 4.0e-17 92.4 109 49.5
PGR102G0265 Punica granatum HOM05D008049 ORTHO05D010198 2.6e-16 89.7 117 42.7
Duzib187G0110 Durio zibethinus HOM05D008049 ORTHO05D010198 3.3e-16 89.4 105 43.8
RcHm_v2.0_Chr2g0123171 Rosa chinensis HOM05D008049 ORTHO05D010198 4.4e-16 89.0 144 39.6
Atru.chr4.1095 Acer truncatum HOM05D008049 ORTHO05D010198 7.5e-16 88.2 110 42.7
Atru.chr4.1100 Acer truncatum HOM05D008049 ORTHO05D010198 7.5e-16 88.2 110 42.7
DCAR_013179 Daucus carota HOM05D008049 ORTHO05D010198 7.5e-16 88.2 271 29.5
Ciclev10002216m.g Citrus clementina HOM05D008049 ORTHO05D010198 9.7e-16 87.8 159 39.0
THA.LOC104818414 Tarenaya hassleriana HOM05D008049 ORTHO05D010198 1.7e-15 87.0 104 46.2
arahy.Tifrunner.gnm1.ann1.M4SWJY Arachis hypogaea HOM05D008049 ORTHO05D010198 3.7e-15 85.9 113 44.2
FvH4_1g25250 Fragaria vesca HOM05D008049 ORTHO05D010198 3.7e-15 85.9 144 40.3
FAN19G2909 Fragaria x ananassa HOM05D008049 ORTHO05D010198 3.7e-15 85.9 144 40.3
FAN26G0656 Fragaria x ananassa HOM05D008049 ORTHO05D010198 4.8e-15 85.5 144 40.3
FAN26G2415 Fragaria x ananassa HOM05D008049 ORTHO05D010198 4.8e-15 85.5 144 40.3
Aa31LG3G17800 Aethionema arabicum HOM05D008049 ORTHO05D010198 2.4e-14 83.2 146 36.3
Lj1g0009929 Lotus japonicus HOM05D008049 ORTHO05D010198 2.4e-14 83.2 104 44.2
Sp6g34110 Schrenkiella parvula HOM05D008049 ORTHO05D010198 2.4e-14 83.2 109 45.0
AT5G08770 Arabidopsis thaliana HOM05D008049 ORTHO05D010198 3.1e-14 82.8 106 42.5
AL6G19520 Arabidopsis lyrata HOM05D008049 ORTHO05D010198 5.3e-14 82.0 106 41.5
Phvul.009G152600 Phaseolus vulgaris HOM05D008049 ORTHO05D010198 5.3e-14 82.0 108 42.6
arahy.Tifrunner.gnm1.ann1.WZNZ1Z Arachis hypogaea HOM05D008049 ORTHO05D010198 9.1e-14 81.3 113 41.6
CARHR204240 Cardamine hirsuta HOM05D008049 ORTHO05D010198 9.1e-14 81.3 106 42.5
Glyma.04G208100 Glycine max HOM05D008049 ORTHO05D010198 9.1e-14 81.3 104 43.3
Medtr3g096940 Medicago truncatula HOM05D008049 ORTHO05D010198 9.1e-14 81.3 113 41.6
AUR62006889 Chenopodium quinoa HOM05D008049 ORTHO05D010198 1.2e-13 80.9 106 43.4
Sc09g0002140 Simmondsia chinensis HOM05D008049 ORTHO05D010198 1.6e-13 80.5 107 43.0
Thhalv10014201m.g Eutrema salsugineum HOM05D008049 ORTHO05D010198 2.0e-13 80.1 108 44.4
Glyma.06G157600 Glycine max HOM05D008049 ORTHO05D010198 2.0e-13 80.1 103 43.7
BcaB08g37227 Brassica carinata HOM05D008049 ORTHO05D010198 3.5e-13 79.3 110 42.7
A10p28010 Brassica napus HOM05D008049 ORTHO05D010198 5.9e-13 78.6 106 44.3
BraA10t44851Z Brassica rapa HOM05D008049 ORTHO05D010198 5.9e-13 78.6 106 44.3
C09p68210 Brassica napus HOM05D008049 ORTHO05D010198 7.7e-13 78.2 106 43.4
BolC9t59570H Brassica oleracea HOM05D008049 ORTHO05D010198 7.7e-13 78.2 106 43.4
Lalb_Chr08g0238031 Lupinus albus HOM05D008049 ORTHO05D010198 1.3e-12 77.4 100 45.0
VMungo1309G0538 Vigna mungo HOM05D008049 ORTHO05D010198 3.8e-12 75.9 106 39.6
Carub.0006s0774 Capsella rubella HOM05D008049 ORTHO05D010198 1.1e-11 74.3 104 40.4
Nn5g28352 Nelumbo nucifera HOM05D008049 ORTHO05D010198 2.5e-11 73.2 115 40.9
EL10Ac4g09675 Beta vulgaris HOM05D008049 ORTHO05D010198 1.2e-10 70.9 124 35.5
AUR62000540 Chenopodium quinoa HOM05D008049 ORTHO05D010198 3.0e-09 66.2 84 44.0
SGA_v2.0_scaffold211G42176 Striga asiatica HOM05D000261 ORTHO05D001168 6.8e-09 65.1 74 51.4
MD15G1137000 Malus domestica HOM05D008049 ORTHO05D010198 3.4e-08 62.8 68 41.2
Psat5g058560 Pisum sativum HOM05D008049 ORTHO05D010198 1.3e-07 60.8 83 42.2
CDE04G3132 Ceratophyllum demersum HOM05D008049 ORTHO05D010198 3.1e-06 56.2 95 34.7


User provided reference genes

Program Settings