Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 9.4e-220 766.5 380 100.0
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 7.6e-137 491.1 368 69.0
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.3e-131 473.8 374 65.0
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 2.7e-126 456.1 362 66.0
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 5.1e-125 451.8 366 64.5
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 2.5e-124 449.5 367 63.8
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.6e-123 446.8 314 69.7
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 8.2e-123 444.5 359 64.1
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 1.4e-122 443.7 366 63.1
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 1.8e-122 443.4 372 63.4
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 2.4e-122 443.0 372 63.2
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 3.1e-122 442.6 366 63.7
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 1.2e-121 440.7 355 63.7
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 1.2e-121 440.7 364 64.3
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 2.0e-121 439.9 363 62.5
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.6e-121 439.5 317 68.8
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 3.4e-121 439.1 305 70.2
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 4.5e-121 438.7 324 67.3
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 5.8e-121 438.3 363 62.3
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 5.8e-121 438.3 317 68.5
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 7.6e-121 438.0 364 62.4
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 1.7e-120 436.8 322 67.7
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.2e-120 436.4 362 62.4
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 3.8e-120 435.6 324 66.7
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 3.8e-120 435.6 363 61.7
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 6.5e-120 434.9 316 68.4
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 1.4e-119 433.7 363 63.4
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.9e-119 433.3 344 63.7
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 2.5e-119 433.0 306 69.9
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 2.5e-119 433.0 311 67.2
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 2.5e-119 433.0 317 68.8
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 5.5e-119 431.8 366 64.2
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 4.6e-118 428.7 337 65.9
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 6.0e-118 428.3 366 62.6
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 1.3e-117 427.2 370 61.9
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 3.0e-117 426.0 368 61.7
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 3.9e-117 425.6 332 64.2
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 6.7e-117 424.9 309 68.9
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 6.7e-117 424.9 382 58.9
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 6.7e-117 424.9 366 61.7
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 1.5e-116 423.7 303 69.3
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 1.5e-116 423.7 369 62.3
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 4.3e-116 422.2 372 59.7
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 4.3e-116 422.2 326 63.5
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 9.7e-116 421.0 320 66.9
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 1.3e-115 420.6 326 63.5
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 1.6e-115 420.2 338 63.6
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 1.6e-115 420.2 372 59.9
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 2.8e-115 419.5 336 63.7
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 2.8e-115 419.5 298 71.1
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 3.7e-115 419.1 314 66.6
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 6.3e-115 418.3 300 70.7
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 8.2e-115 417.9 423 54.6
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 1.8e-114 416.8 306 67.6
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 3.1e-114 416.0 314 66.2
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 4.1e-114 415.6 306 65.7
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 4.1e-114 415.6 365 61.9
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.5e-113 413.7 305 68.2
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 4.5e-113 412.1 341 61.6
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 1.3e-112 410.6 361 60.4
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.4e-111 407.1 358 59.8
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 2.5e-111 406.4 410 55.9
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 3.2e-111 406.0 340 60.9
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 4.2e-111 405.6 366 60.1
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 5.5e-111 405.2 305 64.3
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 7.2e-111 404.8 305 66.6
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 1.2e-110 404.1 359 57.4
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 4.6e-110 402.1 291 67.7
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 6.1e-110 401.7 359 57.7
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 7.9e-110 401.4 327 61.5
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.3e-109 399.8 329 63.5
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 3.0e-109 399.4 371 59.3
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 3.0e-109 399.4 353 58.9
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 3.9e-109 399.1 331 60.1
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 6.7e-109 398.3 352 58.2
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 6.7e-109 398.3 336 59.8
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 6.7e-109 398.3 368 58.2
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 1.1e-108 397.5 336 59.5
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 2.0e-108 396.7 331 60.1
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 3.3e-108 396.0 336 59.5
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 4.3e-108 395.6 320 63.1
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 6.9e-106 388.3 346 59.8
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 1.5e-105 387.1 304 65.1
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 7.7e-105 384.8 322 61.2
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 2.1e-102 376.7 339 59.3
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 4.7e-102 375.6 291 63.9
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 5.1e-101 372.1 362 56.9
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 1.5e-100 370.5 347 57.3
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 2.0e-100 370.2 434 48.4
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 2.6e-100 369.8 362 54.4
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 1.1e-98 364.4 339 58.1
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 9.7e-92 341.3 349 52.1
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 2.9e-88 329.7 304 53.6
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 5.7e-84 315.5 297 55.9
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 7.5e-84 315.1 220 71.4
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 7.5e-84 315.1 312 51.0
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 3.5e-81 306.2 296 55.7
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 3.8e-80 302.8 283 51.6
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 1.0e-77 294.7 342 50.3
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 6.8e-77 292.0 261 55.2
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 8.3e-75 285.0 312 50.6
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 6.6e-72 275.4 181 72.4
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.5e-63 247.7 152 76.3
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 1.3e-59 234.6 196 60.2
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.5e-55 221.1 163 66.9
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 1.1e-53 214.9 136 75.0
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 8.9e-53 211.8 137 70.8
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 1.7e-51 207.6 302 39.7
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.5e-44 184.5 214 48.6
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 2.2e-43 180.6 135 61.5
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 2.2e-35 154.1 120 65.8
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.6e-30 137.9 312 30.4
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 3.6e-30 136.7 299 33.4
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 1.2e-28 131.7 289 31.1
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 3.3e-15 87.0 93 48.4
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 7.4e-15 85.9 103 46.6
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 5.5e-10 69.7 52 61.5


User provided reference genes

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