Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 6.7e-67 257.3 137 100.0
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 3.2e-53 211.8 137 83.9
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 6.1e-44 181.0 141 70.2
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 1.8e-43 179.5 136 70.6
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 7.4e-42 174.1 146 66.4
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 1.3e-41 173.3 134 67.9
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 6.3e-41 171.0 147 66.0
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 1.4e-40 169.9 134 67.9
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 1.4e-40 169.9 152 63.2
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 1.8e-40 169.5 149 64.4
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 3.1e-40 168.7 136 66.9
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 3.1e-40 168.7 151 63.6
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 5.3e-40 167.9 147 63.9
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 6.9e-40 167.5 148 64.9
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 1.2e-39 166.8 139 65.5
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 2.0e-39 166.0 150 63.3
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 4.5e-39 164.9 142 69.0
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 1.3e-38 163.3 130 69.2
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 1.7e-38 162.9 161 59.6
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 1.7e-38 162.9 151 61.6
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 1.7e-38 162.9 140 67.9
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 1.7e-38 162.9 149 63.8
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 2.9e-38 162.2 142 64.1
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 2.9e-38 162.2 142 64.8
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 2.9e-38 162.2 152 61.2
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 3.8e-38 161.8 138 63.8
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 3.8e-38 161.8 138 63.8
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 3.8e-38 161.8 137 65.7
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 6.5e-38 161.0 143 63.6
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 8.5e-38 160.6 136 65.4
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 8.5e-38 160.6 154 61.0
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 8.5e-38 160.6 149 61.1
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 1.1e-37 160.2 142 65.5
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 1.1e-37 160.2 150 62.0
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 1.1e-37 160.2 137 65.7
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 1.1e-37 160.2 137 65.7
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 1.9e-37 159.5 134 65.7
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 2.5e-37 159.1 148 58.8
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 2.5e-37 159.1 148 58.8
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 3.2e-37 158.7 133 61.7
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 3.2e-37 158.7 137 65.0
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 3.2e-37 158.7 146 63.7
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 4.2e-37 158.3 151 59.6
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 5.5e-37 157.9 130 67.7
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 5.5e-37 157.9 135 64.4
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 7.2e-37 157.5 139 64.0
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 7.2e-37 157.5 139 66.2
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 9.4e-37 157.1 138 64.5
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 9.4e-37 157.1 146 59.6
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 9.4e-37 157.1 146 59.6
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 2.1e-36 156.0 137 64.2
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 2.1e-36 156.0 134 64.2
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 2.7e-36 155.6 144 63.9
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 2.7e-36 155.6 139 64.0
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 2.7e-36 155.6 141 64.5
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 2.7e-36 155.6 137 62.8
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 2.7e-36 155.6 137 59.9
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 4.7e-36 154.8 162 56.2
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 4.7e-36 154.8 146 59.6
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 4.7e-36 154.8 146 58.9
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 7.9e-36 154.1 131 66.4
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.0e-35 153.7 131 66.4
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 1.0e-35 153.7 149 59.1
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 1.4e-35 153.3 149 59.1
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 2.3e-35 152.5 135 59.3
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 3.0e-35 152.1 137 62.0
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 3.0e-35 152.1 150 58.0
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 3.9e-35 151.8 146 58.9
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 3.9e-35 151.8 137 59.9
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 5.1e-35 151.4 136 61.0
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 5.1e-35 151.4 135 62.2
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 6.7e-35 151.0 136 58.1
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 6.7e-35 151.0 137 58.4
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 8.8e-35 150.6 136 59.6
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 1.1e-34 150.2 142 60.6
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 2.6e-34 149.1 137 60.6
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 3.3e-34 148.7 149 57.7
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 3.3e-34 148.7 137 58.4
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 5.7e-34 147.9 148 58.8
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 9.7e-34 147.1 123 63.4
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 1.7e-33 146.4 145 56.6
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 1.7e-33 146.4 140 57.1
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 1.7e-33 146.4 141 60.3
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 1.7e-33 146.4 153 55.6
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 2.2e-33 146.0 137 55.5
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 3.7e-33 145.2 132 66.7
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 6.3e-33 144.4 136 64.7
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 8.2e-33 144.1 143 58.7
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 1.4e-32 143.3 123 62.6
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 1.8e-32 142.9 138 55.1
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 2.4e-32 142.5 124 62.9
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 3.1e-32 142.1 143 58.0
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 4.1e-32 141.7 134 58.2
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 1.2e-31 140.2 127 59.8
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 2.0e-31 139.4 134 56.7
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 2.0e-31 139.4 134 56.7
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 3.5e-31 138.7 134 56.0
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 4.5e-31 138.3 133 58.6
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 1.3e-30 136.7 130 57.7
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 2.2e-30 136.0 134 56.0
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 5.5e-29 131.3 133 54.1
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 7.2e-29 131.0 140 55.0
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 6.1e-28 127.9 133 52.6
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 1.0e-27 127.1 130 54.6
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 1.0e-27 127.1 145 53.8
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 3.0e-27 125.6 130 54.6
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 3.0e-27 125.6 130 54.6
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 3.0e-27 125.6 130 54.6
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 3.0e-27 125.6 130 54.6
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 5.2e-27 124.8 153 50.3
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 1.7e-25 119.8 143 49.7
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 2.2e-25 119.4 144 50.0
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 1.8e-24 116.3 126 53.2
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 7.0e-24 114.4 134 51.5
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 1.7e-22 109.8 129 50.4
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 1.7e-22 109.8 131 53.4
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 1.5e-21 106.7 109 58.7
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 5.5e-21 104.8 108 53.7
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 3.6e-20 102.1 131 45.0
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 1.0e-19 100.5 111 55.9
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 2.0e-18 96.3 100 51.0
PGR083G0073 Punica granatum HOM05D006047 ORTHO05D007353 2.2e-17 92.8 130 47.7
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 2.2e-17 92.8 142 44.4
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 2.4e-16 89.4 70 61.4
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 1.6e-12 76.6 54 68.5
BcaC01g04858 Brassica carinata HOM05D006047 ORTHO05D007353 1.0e-11 73.9 134 35.8
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 1.8e-11 73.2 54 64.8
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 7.5e-10 67.8 72 51.4
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 4.8e-09 65.1 67 47.8
SGA_v2.0_scaffold332G48968 Striga asiatica HOM05D006047 ORTHO05D007353 1.4e-08 63.5 60 70.0
Zm00001eb046330 Zea mays HOM05D001486 ORTHO05D036446 2.7e-07 59.3 96 45.8
Cre01.g031250 Chlamydomonas reinhardtii HOM05D006047 ORTHO05D007353 2.9e-06 55.8 117 33.3
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 5.0e-06 55.1 129 34.1


User provided reference genes

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