Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 2.7e-67 258.5 124 100.0
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 2.0e-62 242.3 124 91.9
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 2.6e-62 241.9 124 92.7
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 6.5e-61 237.3 124 90.3
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 2.5e-60 235.3 125 89.6
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 4.2e-60 234.6 124 88.7
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 5.5e-60 234.2 124 89.5
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 9.3e-60 233.4 124 86.3
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 1.2e-59 233.0 125 88.8
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 6.0e-59 230.7 125 87.2
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 6.0e-59 230.7 125 87.2
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 1.0e-58 229.9 125 86.4
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 1.3e-58 229.6 125 87.2
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 1.3e-58 229.6 125 87.2
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 1.3e-58 229.6 125 85.6
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 1.8e-58 229.2 125 86.4
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 1.8e-58 229.2 125 86.4
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 1.8e-58 229.2 124 87.1
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 3.0e-58 228.4 125 85.6
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 3.9e-58 228.0 125 84.0
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 3.9e-58 228.0 125 84.0
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 5.1e-58 227.6 124 85.5
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 5.1e-58 227.6 124 85.5
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 8.7e-58 226.9 125 87.2
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 1.1e-57 226.5 125 84.0
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 1.1e-57 226.5 125 85.6
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 1.1e-57 226.5 125 88.8
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 1.1e-57 226.5 125 88.0
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 1.5e-57 226.1 125 87.2
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.5e-57 226.1 125 85.6
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 1.5e-57 226.1 125 83.2
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 1.9e-57 225.7 124 84.7
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.9e-57 225.7 124 84.7
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.9e-57 225.7 124 84.7
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 1.9e-57 225.7 125 84.0
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 2.5e-57 225.3 125 84.8
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 2.5e-57 225.3 124 84.7
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 3.3e-57 224.9 125 84.0
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 3.3e-57 224.9 125 87.2
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 3.3e-57 224.9 125 84.0
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 4.3e-57 224.6 125 83.2
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 4.3e-57 224.6 125 87.2
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 7.4e-57 223.8 125 85.6
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 9.6e-57 223.4 125 84.8
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 9.6e-57 223.4 125 85.6
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 1.6e-56 222.6 125 83.2
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 1.6e-56 222.6 125 82.4
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 2.1e-56 222.2 124 81.5
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 2.1e-56 222.2 125 86.4
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.8e-56 221.9 124 83.1
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 6.2e-56 220.7 124 82.3
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 6.2e-56 220.7 124 86.3
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 6.2e-56 220.7 125 81.6
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 8.2e-56 220.3 132 82.6
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 1.8e-55 219.2 124 80.6
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 1.8e-55 219.2 124 80.6
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 2.4e-55 218.8 124 80.6
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 3.1e-55 218.4 124 83.1
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 3.1e-55 218.4 124 83.1
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 3.1e-55 218.4 125 84.0
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 4.1e-55 218.0 137 79.6
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 4.1e-55 218.0 125 80.8
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 4.1e-55 218.0 125 80.8
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 4.1e-55 218.0 124 81.5
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 9.0e-55 216.9 125 84.8
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 1.2e-54 216.5 125 83.2
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 1.5e-54 216.1 125 83.2
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 3.4e-54 214.9 124 82.3
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 5.8e-54 214.2 124 80.6
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 2.2e-53 212.2 149 70.5
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 2.9e-53 211.8 124 79.8
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 1.4e-52 209.5 125 81.6
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 7.2e-52 207.2 125 79.2
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 9.3e-52 206.8 124 79.8
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 1.6e-51 206.1 124 75.8
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 3.5e-51 204.9 125 78.4
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 4.6e-51 204.5 171 61.4
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 6.1e-51 204.1 125 77.6
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 1.0e-50 203.4 125 80.8
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 1.0e-50 203.4 125 80.0
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 1.3e-50 203.0 124 75.8
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 5.1e-50 201.1 108 85.2
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 8.7e-50 200.3 125 76.8
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 3.3e-49 198.4 124 72.6
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 4.3e-49 198.0 125 76.0
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 3.7e-48 194.9 103 88.3
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 3.1e-47 191.8 103 87.4
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 5.3e-47 191.0 204 52.9
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 1.5e-46 189.5 125 72.0
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 2.0e-46 189.1 125 69.6
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 7.7e-46 187.2 103 85.4
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 2.9e-45 185.3 124 70.2
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 5.0e-45 184.5 103 83.5
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 5.0e-45 184.5 125 72.0
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 1.4e-44 183.0 125 70.4
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 1.9e-44 182.6 125 69.6
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 7.9e-43 177.2 125 67.2
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 1.4e-42 176.4 125 71.2
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 1.8e-42 176.0 123 68.3
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 2.3e-42 175.6 122 64.8
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 6.7e-42 174.1 125 67.2
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 1.1e-41 173.3 120 69.2
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 2.5e-41 172.2 124 67.7
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 7.4e-41 170.6 124 63.7
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 7.4e-41 170.6 124 63.7
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 1.3e-40 169.9 124 64.5
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 1.8e-39 166.0 122 63.1
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 1.8e-39 166.0 122 63.1
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 2.0e-38 162.5 126 62.7
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 4.2e-36 154.8 119 63.0
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 1.5e-33 146.4 113 59.3
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 4.1e-31 138.3 80 78.8
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 4.1e-31 138.3 80 78.8
Prupe.4G038000 Prunus persica HOM05D006134 ORTHO05D007671 1.3e-24 116.7 105 59.0
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 3.7e-24 115.2 80 63.8
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 1.8e-23 112.8 80 63.8
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 1.0e-21 107.1 77 63.6
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 1.0e-21 107.1 77 63.6
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 2.9e-21 105.5 69 73.9
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 1.6e-19 99.8 66 68.2
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 1.4e-18 96.7 58 75.9
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 1.4e-18 96.7 58 75.9
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 3.7e-16 88.6 78 55.1
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 3.7e-16 88.6 53 77.4
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 3.1e-15 85.5 58 70.7
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 4.2e-12 75.1 45 75.6
EL10Ac8g18393 Beta vulgaris HOM05D006134 ORTHO05D007671 7.2e-12 74.3 44 81.8
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 7.2e-12 74.3 44 77.3
SMO230G0118 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 1.4e-07 60.1 40 70.0


User provided reference genes

Program Settings