Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold207G41882 Striga asiatica HOM05D003311 ORTHO05D003707 1.5e-123 446.8 342 100.0
MSTRG.16857 Avicennia marina HOM05D003311 ORTHO05D003707 8.9e-52 208.4 188 59.0
Oeu010053.1 Olea europaea HOM05D003311 ORTHO05D003707 5.7e-51 205.7 184 58.7
Oeu008607.1 Olea europaea HOM05D003311 ORTHO05D003707 1.7e-50 204.1 184 57.6
MSTRG.5426 Avicennia marina HOM05D003311 ORTHO05D003707 3.1e-49 199.9 191 58.6
SGA_v2.0_scaffold32G13229 Striga asiatica HOM05D003311 ORTHO05D003707 1.5e-46 191.0 181 56.9
Oeu008608.1 Olea europaea HOM05D003311 ORTHO05D003707 4.3e-46 189.5 194 55.2
SalBow3G2231 Salvia bowleyana HOM05D003311 ORTHO05D003707 1.2e-45 188.0 172 56.4
SalBow6G3538 Salvia bowleyana HOM05D003311 ORTHO05D003707 1.2e-45 188.0 191 55.5
Duzib052G0176 Durio zibethinus HOM05D003311 ORTHO05D003707 4.4e-43 179.5 200 51.0
Nitab4.5_0000956g0190 Nicotiana tabacum HOM05D003311 ORTHO05D003707 9.8e-43 178.3 183 53.0
Sabra04G0113000 Salix brachista HOM05D003311 ORTHO05D003707 2.9e-42 176.8 190 52.6
GSVIVG01024081001 Vitis vinifera HOM05D003311 ORTHO05D003707 3.7e-42 176.4 189 51.3
Potri.004G168600 Populus trichocarpa HOM05D003311 ORTHO05D003707 4.9e-42 176.0 184 52.2
Thecc.02G066700 Theobroma cacao HOM05D003311 ORTHO05D003707 8.3e-42 175.3 184 51.1
CAN.G588.28 Capsicum annuum HOM05D003311 ORTHO05D003707 1.2e-40 171.4 180 53.3
Duzib132G0547 Durio zibethinus HOM05D003311 ORTHO05D003707 1.2e-40 171.4 184 52.2
Peaxi162Scf00362g00962 Petunia axillaris HOM05D003311 ORTHO05D003707 3.5e-40 169.9 189 51.9
Nitab4.5_0013889g0010 Nicotiana tabacum HOM05D003311 ORTHO05D003707 4.6e-40 169.5 189 50.3
Lj9A389T67 Lonicera japonica HOM05D003311 ORTHO05D003707 1.0e-39 168.3 189 50.3
Potri.009G129900 Populus trichocarpa HOM05D003311 ORTHO05D003707 5.0e-39 166.0 184 50.0
AUR62013087 Chenopodium quinoa HOM05D003311 ORTHO05D003707 8.6e-39 165.2 179 48.0
Duzib099G0001 Durio zibethinus HOM05D003311 ORTHO05D003707 1.5e-38 164.5 187 48.7
Lj3g0005308 Lotus japonicus HOM05D003311 ORTHO05D003707 1.9e-38 164.1 166 55.4
Peaxi162Scf00538g00520 Petunia axillaris HOM05D003311 ORTHO05D003707 1.9e-38 164.1 182 50.0
AUR62010091 Chenopodium quinoa HOM05D003311 ORTHO05D003707 4.3e-38 162.9 189 46.0
Gorai.002G193500 Gossypium raimondii HOM05D003311 ORTHO05D003707 5.6e-38 162.5 161 53.4
PGSC0003DMG400001631 Solanum tuberosum HOM05D003311 ORTHO05D003707 5.6e-38 162.5 146 56.8
CSS0033713 Camellia sinensis var. sinensis HOM05D003311 ORTHO05D003707 7.3e-38 162.2 179 51.4
Gohir.D01G156000 Gossypium hirsutum HOM05D003311 ORTHO05D003707 7.3e-38 162.2 161 53.4
Atru.chr5.3229 Acer truncatum HOM05D003311 ORTHO05D003707 9.5e-38 161.8 188 49.5
Lsat_1_v5_gn_3_45680 Lactuca sativa HOM05D003311 ORTHO05D003707 9.5e-38 161.8 163 51.5
Prupe.8G160900 Prunus persica HOM05D003311 ORTHO05D003707 1.2e-37 161.4 176 53.4
Cfa005186 Carpinus fangiana HOM05D003311 ORTHO05D003707 2.1e-37 160.6 184 50.0
ECA246G0279 Erigeron canadensis HOM05D003311 ORTHO05D003707 4.7e-37 159.5 167 50.3
TWI75G0647 Tripterygium wilfordii HOM05D003311 ORTHO05D003707 4.7e-37 159.5 176 50.6
Gohir.A01G164100 Gossypium hirsutum HOM05D003311 ORTHO05D003707 6.2e-37 159.1 161 52.2
Sopen01g053220 Solanum pennellii HOM05D003311 ORTHO05D003707 6.2e-37 159.1 197 48.2
TWI79G0740 Tripterygium wilfordii HOM05D003311 ORTHO05D003707 6.2e-37 159.1 157 55.4
DCAR_022953 Daucus carota HOM05D003311 ORTHO05D003707 8.0e-37 158.7 178 48.3
Sabra09G0099300 Salix brachista HOM05D003311 ORTHO05D003707 8.0e-37 158.7 184 48.4
DCAR_003701 Daucus carota HOM05D003311 ORTHO05D003707 1.1e-36 158.3 162 50.6
COL.COLO4_17258 Corchorus olitorius HOM05D003311 ORTHO05D003707 1.4e-36 157.9 195 46.7
ECA234G1895 Erigeron canadensis HOM05D003311 ORTHO05D003707 1.4e-36 157.9 168 50.0
Actinidia20487 Actinidia chinensis HOM05D000144 ORTHO05D003707 2.3e-36 157.1 182 48.4
MD05G1116400 Malus domestica HOM05D003311 ORTHO05D003707 4.0e-36 156.4 188 52.7
HanXRQChr10g0290731 Helianthus annuus HOM05D003311 ORTHO05D003707 8.9e-36 155.2 175 48.6
MELO3C020785.2 Cucumis melo HOM05D003311 ORTHO05D003707 1.5e-35 154.5 186 47.3
Dinv04967 Davidia involucrata HOM05D003311 ORTHO05D003707 1.5e-35 154.5 205 48.3
MD10G1118600 Malus domestica HOM05D003311 ORTHO05D003707 1.5e-35 154.5 174 53.4
RcHm_v2.0_Chr6g0245161 Rosa chinensis HOM05D003311 ORTHO05D003707 1.5e-35 154.5 198 47.5
QL11p047628 Quercus lobata HOM05D003311 ORTHO05D003707 2.0e-35 154.1 181 48.6
TAR628G0207 Trochodendron aralioides HOM05D003311 ORTHO05D003707 2.0e-35 154.1 184 46.2
HanXRQChr10g0294871 Helianthus annuus HOM05D003311 ORTHO05D003707 3.4e-35 153.3 171 48.0
Rhsim11G0187900 Rhododendron simsii HOM05D003311 ORTHO05D003707 4.4e-35 152.9 187 46.5
vmacro02251 Vaccinium macrocarpon HOM05D003311 ORTHO05D003707 7.5e-35 152.1 181 48.1
Ciclev10028101m.g Citrus clementina HOM05D003311 ORTHO05D003707 1.7e-34 151.0 181 48.6
Hund00043 Selenicereus undatus HOM05D003311 ORTHO05D003707 1.7e-34 151.0 190 45.8
MSTRG.20036 Avicennia marina HOM05D003311 ORTHO05D003707 2.9e-34 150.2 133 60.2
CiPaw.06G125100 Carya illinoinensis HOM05D003311 ORTHO05D003707 2.9e-34 150.2 194 45.9
HanXRQChr10g0289061 Helianthus annuus HOM05D003311 ORTHO05D003707 2.9e-34 150.2 183 48.1
Medtr4g075333 Medicago truncatula HOM05D003311 ORTHO05D003707 2.9e-34 150.2 169 49.7
Solyc10g054900.2 Solanum lycopersicum HOM05D003311 ORTHO05D003707 2.9e-34 150.2 184 47.3
CsaV3_2G015730 Cucumis sativus L. HOM05D003311 ORTHO05D003707 3.7e-34 149.8 186 45.7
Actinidia00597 Actinidia chinensis HOM05D003311 ORTHO05D003707 4.9e-34 149.4 187 46.5
unitig_0.g832 Utricularia gibba HOM05D003311 ORTHO05D003707 4.9e-34 149.4 158 49.4
PGSC0003DMG400004441 Solanum tuberosum HOM05D003311 ORTHO05D003707 8.3e-34 148.7 152 50.7
HanXRQChr07g0186871 Helianthus annuus HOM05D003311 ORTHO05D003707 1.1e-33 148.3 193 46.6
Hma1.2p1_4000F.1_g338120 Hydrangea macrophylla HOM05D003311 ORTHO05D003707 1.1e-33 148.3 184 44.0
TPR.G17164 Trifolium pratense HOM05D003311 ORTHO05D003707 1.1e-33 148.3 165 48.5
unitig_744.g24265 Utricularia gibba HOM05D003311 ORTHO05D003707 1.1e-33 148.3 189 47.1
CiPaw.05G077500 Carya illinoinensis HOM05D003311 ORTHO05D003707 1.4e-33 147.9 182 45.1
ClCG02G011360 Citrullus lanatus HOM05D003311 ORTHO05D003707 1.4e-33 147.9 186 45.7
ClCG02G011540 Citrullus lanatus HOM05D003311 ORTHO05D003707 1.4e-33 147.9 186 45.7
Eucgr.L01869 Eucalyptus grandis HOM05D003311 ORTHO05D003707 1.9e-33 147.5 189 43.4
FAN27G1129 Fragaria x ananassa HOM05D003311 ORTHO05D003707 1.9e-33 147.5 172 49.4
Sopen10g024820 Solanum pennellii HOM05D003311 ORTHO05D003707 1.9e-33 147.5 183 47.0
Ah.01g009150 Amaranthus hybridus HOM05D003396 ORTHO05D003646 2.4e-33 147.1 130 49.2
FAN15G0502 Fragaria x ananassa HOM05D003311 ORTHO05D003707 2.4e-33 147.1 172 49.4
unitig_37.g12824 Utricularia gibba HOM05D003311 ORTHO05D003707 2.4e-33 147.1 182 45.6
Sopen10g024830 Solanum pennellii HOM05D003311 ORTHO05D003707 3.2e-33 146.7 179 46.9
GSVIVG01024076001 Vitis vinifera HOM05D003311 ORTHO05D003707 3.2e-33 146.7 184 46.7
Atru.chr5.3230 Acer truncatum HOM05D003311 ORTHO05D003707 9.2e-33 145.2 182 47.3
FAN20G1603 Fragaria x ananassa HOM05D003311 ORTHO05D003707 9.2e-33 145.2 172 48.8
Ca_19004_v3 Cicer arietinum L. HOM05D003311 ORTHO05D003707 1.2e-32 144.8 186 46.8
FvH4_2g01970 Fragaria vesca HOM05D003311 ORTHO05D003707 1.6e-32 144.4 172 48.3
Lalb_Chr03g0024711 Lupinus albus HOM05D003311 ORTHO05D003707 1.6e-32 144.4 178 45.5
Sc08g0003160 Simmondsia chinensis HOM05D003311 ORTHO05D003707 1.6e-32 144.4 177 45.2
Phvul.011G026700 Phaseolus vulgaris HOM05D003311 ORTHO05D003707 2.1e-32 144.1 176 46.0
Hund06406 Selenicereus undatus HOM05D003396 ORTHO05D003646 2.1e-32 144.1 179 45.8
Nn5g29097 Nelumbo nucifera HOM05D003311 ORTHO05D003707 3.5e-32 143.3 185 42.2
Cpa.g.sc37.189 Carica papaya HOM05D003311 ORTHO05D003707 4.6e-32 142.9 162 51.2
FAN24G0785 Fragaria x ananassa HOM05D003311 ORTHO05D003707 4.6e-32 142.9 172 47.7
PGSC0003DMG400001243 Solanum tuberosum HOM05D003311 ORTHO05D003707 4.6e-32 142.9 147 49.0
Gohir.D04G164900 Gossypium hirsutum HOM05D003311 ORTHO05D003707 7.8e-32 142.1 167 46.7
Gorai.012G153300 Gossypium raimondii HOM05D003311 ORTHO05D003707 7.8e-32 142.1 167 46.7
Sed0022693 Sechium edule HOM05D003311 ORTHO05D003707 7.8e-32 142.1 161 46.0
Gohir.A04G122900 Gossypium hirsutum HOM05D003311 ORTHO05D003707 1.3e-31 141.4 167 46.1
Manes.11G090200 Manihot esculenta HOM05D003311 ORTHO05D003707 1.7e-31 141.0 184 46.7
Aqoxy5G01798 Aquilegia oxysepala HOM05D003311 ORTHO05D003707 3.0e-31 140.2 190 44.7
Haze_02195 Corylus avellana HOM05D003311 ORTHO05D003707 5.1e-31 139.4 183 45.9
arahy.Tifrunner.gnm1.ann1.6SU9IG Arachis hypogaea HOM05D003311 ORTHO05D003707 6.6e-31 139.0 158 47.5
arahy.Tifrunner.gnm1.ann1.M74JA5 Arachis hypogaea HOM05D003311 ORTHO05D003707 8.6e-31 138.7 158 47.5
CANSAT25G1598 Cannabis sativa HOM05D003311 ORTHO05D003707 1.1e-30 138.3 175 48.0
EL10Ac9g21436 Beta vulgaris HOM05D003311 ORTHO05D003707 1.5e-30 137.9 174 46.6
Sopen10g024840 Solanum pennellii HOM05D003311 ORTHO05D003707 1.5e-30 137.9 152 48.7
Lalb_Chr01g0001331 Lupinus albus HOM05D003311 ORTHO05D003707 1.9e-30 137.5 155 47.1
Sed0012527 Sechium edule HOM05D003311 ORTHO05D003707 1.9e-30 137.5 186 43.0
CAN.G104.8 Capsicum annuum HOM05D003311 ORTHO05D003707 4.3e-30 136.3 174 46.0
Aqoxy5G01799 Aquilegia oxysepala HOM05D003311 ORTHO05D003707 7.3e-30 135.6 178 40.4
Eucgr.I01377 Eucalyptus grandis HOM05D003311 ORTHO05D003707 1.2e-29 134.8 183 43.2
Psat7g138320 Pisum sativum HOM05D003311 ORTHO05D003707 1.6e-29 134.4 134 53.7
TAR376G0773 Trochodendron aralioides HOM05D003311 ORTHO05D003707 3.6e-29 133.3 153 45.8
CsaV3_7G000820 Cucumis sativus L. HOM05D000144 ORTHO05D003707 4.7e-29 132.9 193 41.5
Nn1g05901 Nelumbo nucifera HOM05D003311 ORTHO05D003707 6.2e-29 132.5 161 46.0
Glyma.04G005400 Glycine max HOM05D003311 ORTHO05D003707 8.1e-29 132.1 164 47.6
Rhsim05G0063000 Rhododendron simsii HOM05D003311 ORTHO05D003707 1.4e-28 131.3 169 42.0
Nitab4.5_0000283g0120 Nicotiana tabacum HOM05D003311 ORTHO05D003707 2.3e-28 130.6 182 44.0
CSS0038966 Camellia sinensis var. sinensis HOM05D003311 ORTHO05D003707 4.0e-28 129.8 156 47.4
unitig_21.g20802 Utricularia gibba HOM05D003311 ORTHO05D003707 5.2e-28 129.4 157 47.1
PGR042G2254 Punica granatum HOM05D003311 ORTHO05D003707 6.8e-28 129.0 172 43.6
Ciclev10029326m.g Citrus clementina HOM05D003311 ORTHO05D003707 1.2e-27 128.3 151 48.3
Oeu046127.1 Olea europaea HOM05D003311 ORTHO05D003707 1.5e-27 127.9 193 43.0
Oeu046128.1 Olea europaea HOM05D000700 ORTHO05D000397 3.4e-27 126.7 174 44.8
Phvul.009G024900 Phaseolus vulgaris HOM05D003311 ORTHO05D003707 5.8e-27 125.9 179 44.7
unitig_60.g25871 Utricularia gibba HOM05D003311 ORTHO05D003707 7.5e-27 125.6 204 39.7
VMungo1309G0179 Vigna mungo HOM05D003311 ORTHO05D003707 9.9e-27 125.2 159 47.2
MELO3C013376.2 Cucumis melo HOM05D003311 ORTHO05D003707 3.7e-26 123.2 196 38.8
Sp4g00290 Schrenkiella parvula HOM05D003311 ORTHO05D003707 6.4e-26 122.5 176 43.2
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 1.4e-25 121.3 161 44.7
PSO700G0002 Papaver somniferum HOM05D003311 ORTHO05D003707 5.4e-25 119.4 202 39.1
Thhalv10000244m.g Eutrema salsugineum HOM05D003311 ORTHO05D003707 7.1e-25 119.0 181 42.0
MBI09_g00986_MAGBIO Magnolia biondii HOM05D003311 ORTHO05D003707 7.1e-25 119.0 194 39.2
Nitab4.5_0000980g0220 Nicotiana tabacum HOM05D003311 ORTHO05D003707 7.1e-25 119.0 135 49.6
ClCG02G004300 Citrullus lanatus HOM05D003311 ORTHO05D003707 9.2e-25 118.6 247 33.2
ATR0810G037 Amborella trichopoda HOM05D003311 ORTHO05D003707 1.2e-24 118.2 149 43.6
AT4G38770 Arabidopsis thaliana HOM05D003311 ORTHO05D003707 2.1e-24 117.5 153 45.1
CARHR111970 Cardamine hirsuta HOM05D003311 ORTHO05D003707 2.7e-24 117.1 184 41.3
AL7G10640 Arabidopsis lyrata HOM05D003311 ORTHO05D003707 6.0e-24 115.9 153 45.1
Thhalv10025123m.g Eutrema salsugineum HOM05D003311 ORTHO05D003707 6.0e-24 115.9 155 47.1
Carub.0007s0062 Capsella rubella HOM05D003311 ORTHO05D003707 7.8e-24 115.5 187 39.0
AL4G10230 Arabidopsis lyrata HOM05D003311 ORTHO05D003707 2.3e-23 114.0 185 39.5
PSO170G2430 Papaver somniferum HOM05D003311 ORTHO05D003707 2.3e-23 114.0 202 37.6
ClCG00G004470 Citrullus lanatus HOM05D003311 ORTHO05D003707 3.0e-23 113.6 142 46.5
MBI05_g46239_MAGBIO Magnolia biondii HOM05D003311 ORTHO05D003707 3.9e-23 113.2 149 40.9
CARHR294460 Cardamine hirsuta HOM05D003311 ORTHO05D003707 5.1e-23 112.8 190 40.5
C01p00120 Brassica napus HOM05D003311 ORTHO05D003707 6.6e-23 112.5 166 40.4
BcaNung01299 Brassica carinata HOM05D003311 ORTHO05D003707 8.6e-23 112.1 166 40.4
BolC1t00017H Brassica oleracea HOM05D003311 ORTHO05D003707 8.6e-23 112.1 166 40.4
A04p15910 Brassica napus HOM05D003311 ORTHO05D003707 1.1e-22 111.7 174 42.0
AT2G21140 Arabidopsis thaliana HOM05D003311 ORTHO05D003707 1.5e-22 111.3 183 39.3
A08p24020 Brassica napus HOM05D003311 ORTHO05D003707 1.5e-22 111.3 153 42.5
BraA01t00013Z Brassica rapa HOM05D003311 ORTHO05D003707 1.5e-22 111.3 157 40.8
BraA08t34359Z Brassica rapa HOM05D003311 ORTHO05D003707 1.5e-22 111.3 153 42.5
THA.LOC104824774 Tarenaya hassleriana HOM05D003311 ORTHO05D003707 1.9e-22 110.9 179 40.2
THA.LOC104807787 Tarenaya hassleriana HOM05D003311 ORTHO05D003707 2.5e-22 110.5 157 40.8
BcaC01g00253 Brassica carinata HOM05D003311 ORTHO05D003707 4.3e-22 109.8 153 42.5
C03p77310 Brassica napus HOM05D003311 ORTHO05D003707 4.3e-22 109.8 153 42.5
BolC3t19984H Brassica oleracea HOM05D003311 ORTHO05D003707 4.3e-22 109.8 153 42.5
Carub.0004s0016 Capsella rubella HOM05D003311 ORTHO05D003707 7.3e-22 109.0 187 38.5
Sp7g37040 Schrenkiella parvula HOM05D003311 ORTHO05D003707 7.3e-22 109.0 153 43.1
BcaB03g12224 Brassica carinata HOM05D003311 ORTHO05D003707 2.8e-21 107.1 154 42.2
DCAR_003704 Daucus carota HOM05D003311 ORTHO05D003707 3.6e-21 106.7 148 39.2
Aa31LG6G16430 Aethionema arabicum HOM05D003311 ORTHO05D003707 4.7e-21 106.3 185 37.8
Aa31LG7G15540 Aethionema arabicum HOM05D003311 ORTHO05D003707 1.1e-20 105.1 188 36.7
C04p50360 Brassica napus HOM05D003311 ORTHO05D003707 4.0e-20 103.2 174 39.1
BolC4t26634H Brassica oleracea HOM05D003311 ORTHO05D003707 4.0e-20 103.2 174 39.1
Duzib248G1175 Durio zibethinus HOM05D003311 ORTHO05D003707 4.9e-18 96.3 108 48.1
CDE08G0629 Ceratophyllum demersum HOM05D003311 ORTHO05D003707 4.2e-17 93.2 156 37.2
QL09p030113 Quercus lobata HOM05D003311 ORTHO05D003707 4.2e-17 93.2 91 48.4
MBI05_g26897_MAGBIO Magnolia biondii HOM05D003311 ORTHO05D003707 5.4e-17 92.8 131 38.9
vmacro17380 Vaccinium macrocarpon HOM05D003311 ORTHO05D003707 1.3e-15 88.2 103 42.7
HPP92_022646 Vanilla planifolia HOM05D003311 ORTHO05D003707 3.9e-15 86.7 182 35.2
SGA_v2.0_scaffold58G20458 Striga asiatica HOM05D003311 ORTHO05D003707 6.6e-15 85.9 72 59.7
DCAR_003702 Daucus carota HOM05D003311 ORTHO05D003707 1.9e-14 84.3 150 35.3
MBI05_g25817_MAGBIO Magnolia biondii HOM05D003311 ORTHO05D003707 1.9e-14 84.3 150 34.0
Zm00001eb026460 Zea mays HOM05D003311 ORTHO05D003707 4.7e-13 79.7 196 30.6
Os10g0149000 Oryza sativa ssp. japonica HOM05D003311 ORTHO05D003707 4.0e-12 76.6 145 40.0
Os10g0149200 Oryza sativa ssp. japonica HOM05D003311 ORTHO05D003707 4.0e-12 76.6 145 40.0
Cc02_g16500 Coffea canephora HOM05D003311 ORTHO05D003707 6.9e-12 75.9 68 52.9
Os10g0149400 Oryza sativa ssp. japonica HOM05D003311 ORTHO05D003707 1.2e-11 75.1 145 40.0
QL04p095545 Quercus lobata HOM05D003311 ORTHO05D003707 1.3e-10 71.6 85 42.4
Lj5A184G34 Lonicera japonica HOM05D003311 ORTHO05D003707 8.4e-10 68.9 89 42.7
Zm00001eb398790 Zea mays HOM05D003311 ORTHO05D003707 1.4e-09 68.2 111 36.9
QL04p026366 Quercus lobata HOM05D003311 ORTHO05D003707 1.3e-07 61.6 69 43.5


User provided reference genes

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