Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 4.5e-255 884.0 423 100.0
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 2.2e-238 828.6 437 91.1
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 2.8e-164 582.4 445 64.9
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 1.7e-145 520.0 422 60.2
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 2.1e-143 513.1 413 60.8
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 3.3e-141 505.8 418 59.6
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 7.6e-138 494.6 414 58.0
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 1.9e-136 490.0 437 56.8
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 1.2e-135 487.3 417 56.1
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 1.6e-135 486.9 424 56.6
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 2.1e-135 486.5 405 57.8
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 4.6e-135 485.3 426 55.6
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 6.1e-135 485.0 398 59.8
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 2.3e-134 483.0 409 57.0
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 3.0e-134 482.6 419 57.0
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.7e-132 476.9 416 55.5
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 2.2e-132 476.5 412 54.9
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 2.2e-132 476.5 412 54.9
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 3.7e-132 475.7 423 55.3
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 6.3e-132 474.9 448 53.6
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 1.1e-131 474.2 406 53.9
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 1.4e-131 473.8 405 56.0
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 6.9e-131 471.5 418 54.8
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 2.0e-130 469.9 406 53.4
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 2.0e-130 469.9 422 55.7
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 3.4e-130 469.2 406 54.9
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 4.5e-130 468.8 433 52.7
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 7.7e-130 468.0 414 54.1
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 7.7e-130 468.0 419 54.7
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 3.8e-129 465.7 406 53.2
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 5.0e-129 465.3 411 56.0
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 6.5e-129 464.9 411 55.0
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 8.5e-129 464.5 410 54.9
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 8.5e-129 464.5 439 53.8
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 1.1e-128 464.2 418 51.4
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 1.1e-128 464.2 418 53.1
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 1.4e-128 463.8 402 54.0
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 1.9e-128 463.4 407 55.5
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 3.2e-128 462.6 399 54.9
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 5.5e-128 461.8 400 56.2
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 9.4e-128 461.1 408 54.7
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 1.2e-127 460.7 433 52.7
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 2.1e-127 459.9 412 54.6
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 2.7e-127 459.5 415 52.8
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 7.9e-127 458.0 405 53.6
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 1.4e-126 457.2 412 53.9
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 3.0e-126 456.1 406 53.2
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 3.9e-126 455.7 415 52.8
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 8.8e-126 454.5 405 52.8
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 2.6e-125 453.0 399 54.9
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 5.7e-125 451.8 407 54.5
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 5.7e-125 451.8 435 52.2
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 1.7e-124 450.3 404 52.0
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 2.2e-124 449.9 414 53.4
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 1.4e-123 447.2 428 51.4
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 1.8e-123 446.8 421 52.5
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 2.4e-123 446.4 424 52.4
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 5.3e-123 445.3 411 52.1
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 5.3e-123 445.3 410 53.7
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 9.1e-123 444.5 414 52.7
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 3.4e-122 442.6 427 50.6
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 1.0e-121 441.0 439 49.4
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 2.2e-121 439.9 412 51.9
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 3.8e-121 439.1 411 51.1
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 6.5e-121 438.3 403 51.9
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 1.9e-120 436.8 412 50.2
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 4.2e-120 435.6 415 52.5
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 6.1e-119 431.8 439 49.7
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 8.0e-119 431.4 379 57.3
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 1.8e-118 430.3 410 53.4
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 3.0e-118 429.5 438 48.6
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 2.0e-117 426.8 411 49.1
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 5.7e-117 425.2 424 48.1
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 2.8e-116 422.9 413 50.6
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 1.1e-115 421.0 402 50.7
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 1.4e-115 420.6 399 49.1
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 1.4e-115 420.6 398 51.5
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 4.5e-114 415.6 397 52.1
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 1.0e-113 414.5 414 51.4
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 1.0e-113 414.5 405 49.9
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 7.2e-112 408.3 400 50.2
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 2.7e-111 406.4 380 51.3
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 3.6e-111 406.0 412 49.3
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 2.3e-110 403.3 411 49.1
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 5.3e-107 392.1 354 53.7
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 1.5e-104 384.0 399 49.6
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 7.2e-104 381.7 412 46.8
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 1.6e-103 380.6 450 43.8
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 2.7e-98 363.2 297 58.2
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 2.9e-97 359.8 356 52.5
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 1.5e-96 357.5 366 48.1
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 1.9e-96 357.1 370 47.0
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 6.6e-89 332.0 417 42.4
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 2.8e-87 326.6 294 52.0
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 7.3e-80 302.0 286 48.6
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 1.8e-78 297.4 300 48.0
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 4.9e-76 289.3 395 41.5
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 1.0e-57 228.4 309 45.3
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 7.6e-53 212.2 313 37.4
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 2.4e-43 180.6 518 28.8
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 1.6e-39 167.9 402 32.8
Lalb_Chr08g0233871 Lupinus albus HOM05D007151 ORTHO05D009056 2.8e-31 140.6 90 71.1
CANSAT11G0850 Cannabis sativa HOM05D007151 ORTHO05D009056 9.0e-30 135.6 123 48.8
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 3.5e-26 123.6 198 36.9
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 3.2e-19 100.5 262 29.0
HPP92_018514 Vanilla planifolia HOM05D007151 ORTHO05D009056 2.7e-18 97.4 82 58.5
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 8.8e-17 92.4 217 30.9
FAN11G2323 Fragaria x ananassa HOM05D007151 ORTHO05D009056 4.1e-14 83.6 79 45.6
TPR.G31928 Trifolium pratense HOM05D007151 ORTHO05D009056 3.8e-12 77.0 78 47.4


User provided reference genes

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