Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold206G41802 Striga asiatica HOM05D011572 ORTHO05D006517 1.6e-291 1005.4 497 100.0
SGA_v2.0_scaffold22G09842 Striga asiatica HOM05D011572 ORTHO05D006517 1.3e-234 816.2 497 83.3
SGA_v2.0_scaffold45G17094 Striga asiatica HOM05D011572 ORTHO05D006517 5.5e-220 767.7 495 79.4
SGA_v2.0_scaffold365G50016 Striga asiatica HOM05D011572 ORTHO05D006517 5.3e-215 751.1 374 97.3
SGA_v2.0_scaffold41G15869 Striga asiatica HOM05D011572 ORTHO05D006517 2.2e-184 649.4 318 98.1
SGA_v2.0_scaffold12G06313 Striga asiatica HOM05D011572 ORTHO05D006517 5.6e-132 475.3 310 77.1
SGA_v2.0_scaffold954G53748 Striga asiatica HOM05D011572 ORTHO05D010459 1.6e-57 228.0 172 74.4
SGA_v2.0_scaffold125G33657 Striga asiatica HOM05D011572 ORTHO05D010459 1.7e-48 198.0 139 77.0
SGA_v2.0_scaffold229G43297 Striga asiatica HOM05D001343 ORTHO05D002008 2.6e-44 184.1 381 36.5
SGA_v2.0_scaffold9G04869 Striga asiatica HOM05D011572 ORTHO05D006517 5.8e-44 183.0 246 43.1
SGA_v2.0_scaffold502G52512 Striga asiatica HOM05D011572 ORTHO05D006517 5.2e-37 159.8 85 90.6
SGA_v2.0_scaffold365G50015 Striga asiatica HOM05D011572 ORTHO05D012893 4.4e-36 156.8 85 94.1
Thecc.02G036800 Theobroma cacao HOM05D008181 ORTHO05D010459 2.6e-20 104.4 417 24.7
SGA_v2.0_scaffold187G40267 Striga asiatica HOM05D011572 ORTHO05D006517 9.9e-20 102.4 118 43.2
SalBow7G0014 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.3e-19 102.1 265 29.8
SalBow8G1323 Salvia bowleyana HOM05D008082 ORTHO05D006517 2.4e-18 97.8 264 28.0
SalBow2G3428 Salvia bowleyana HOM05D008082 ORTHO05D006517 3.2e-18 97.4 264 28.0
SalBow2G3580 Salvia bowleyana HOM05D008082 ORTHO05D006517 3.2e-18 97.4 264 28.0
Thecc.10G054600 Theobroma cacao HOM05D008181 ORTHO05D010459 1.6e-17 95.1 299 26.8
SalBow1G3545 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.3e-16 92.0 264 28.4
SalBow8G0214 Salvia bowleyana HOM05D031689 ORTHO05D006517 3.0e-16 90.9 507 25.4
SalBow1G5862 Salvia bowleyana HOM05D008082 ORTHO05D006517 3.9e-16 90.5 264 27.7
SalBow4G1611 Salvia bowleyana HOM05D009699 ORTHO05D006517 3.9e-16 90.5 253 26.1
SalBow4G1541 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.5e-15 88.6 264 28.8
Thecc.03G161900 Theobroma cacao HOM05D008181 ORTHO05D010459 4.3e-15 87.0 278 24.8
SalBow8G4995 Salvia bowleyana HOM05D008082 ORTHO05D006517 7.4e-15 86.3 264 29.2
SalBow2G0951 Salvia bowleyana HOM05D015320 ORTHO05D006517 2.8e-14 84.3 215 29.3
Thecc.05G196700 Theobroma cacao HOM05D008181 ORTHO05D010459 3.7e-14 84.0 256 26.2
SalBow1G5422 Salvia bowleyana HOM05D010599 ORTHO05D006517 4.8e-14 83.6 232 27.2
SalBow3G1743 Salvia bowleyana HOM05D000011 ORTHO05D006517 1.1e-13 82.4 210 28.6
SalBow3G1893 Salvia bowleyana HOM05D008082 ORTHO05D006517 4.0e-13 80.5 226 27.0
SalBow1G7517 Salvia bowleyana HOM05D010599 ORTHO05D006517 9.0e-13 79.3 140 32.9
SGA_v2.0_scaffold6G03233 Striga asiatica HOM05D001567 ORTHO05D001409 9.0e-13 79.3 37 83.8
Thecc.02G255800 Theobroma cacao HOM05D008181 ORTHO05D010459 9.0e-13 79.3 175 28.0
SalBow8G1146 Salvia bowleyana HOM05D000011 ORTHO05D000018 2.0e-12 78.2 126 34.9
Thecc.05G225100 Theobroma cacao HOM05D008181 ORTHO05D010459 2.6e-12 77.8 219 24.7
SalBow1G6861 Salvia bowleyana HOM05D010599 ORTHO05D006517 5.8e-12 76.6 282 24.5
SalBow2G1190 Salvia bowleyana HOM05D010599 ORTHO05D006517 5.8e-12 76.6 282 24.5
SGA_v2.0_scaffold2719G54189 Striga asiatica HOM05D011572 ORTHO05D010459 1.0e-11 75.9 49 83.7
Thecc.05G178300 Theobroma cacao HOM05D008181 ORTHO05D010459 1.7e-11 75.1 207 24.6
Thecc.07G103000 Theobroma cacao HOM05D008181 ORTHO05D021025 1.7e-11 75.1 157 29.3
SalBow3G2968 Salvia bowleyana HOM05D031689 ORTHO05D006517 2.2e-11 74.7 140 34.3
SalBow3G1903 Salvia bowleyana HOM05D008082 ORTHO05D006517 4.9e-11 73.6 206 28.6
SalBow6G2617 Salvia bowleyana HOM05D008082 ORTHO05D006517 4.9e-11 73.6 207 29.0
Thecc.09G272400 Theobroma cacao HOM05D008181 ORTHO05D010459 4.9e-11 73.6 129 34.9
SalBow5G1923 Salvia bowleyana HOM05D008082 ORTHO05D006517 8.4e-11 72.8 229 25.3
Thecc.01G399000 Theobroma cacao HOM05D008181 ORTHO05D010459 1.4e-10 72.0 215 25.6
Thecc.02G178200 Theobroma cacao HOM05D008181 ORTHO05D021025 1.4e-10 72.0 159 27.7
SalBow1G5610 Salvia bowleyana HOM05D010599 ORTHO05D006517 7.1e-10 69.7 129 33.3
Thecc.06G125800 Theobroma cacao HOM05D008181 ORTHO05D010459 7.1e-10 69.7 154 31.2
SalBow1G7044 Salvia bowleyana HOM05D009699 ORTHO05D006517 9.3e-10 69.3 135 31.1
SalBow6G3176 Salvia bowleyana HOM05D010599 ORTHO05D006517 9.3e-10 69.3 281 25.6
Thecc.04G033000 Theobroma cacao HOM05D008181 ORTHO05D010459 1.6e-09 68.6 156 28.2
SalBow3G2031 Salvia bowleyana HOM05D011572 ORTHO05D006517 2.1e-09 68.2 153 27.5
SalBow2G1060 Salvia bowleyana HOM05D009699 ORTHO05D006517 3.5e-09 67.4 115 32.2
Thecc.09G213300 Theobroma cacao HOM05D008181 ORTHO05D010459 4.6e-09 67.0 234 21.8
SalBow8G1284 Salvia bowleyana HOM05D008082 ORTHO05D006517 6.0e-09 66.6 241 25.3
Thecc.02G200300 Theobroma cacao HOM05D008181 ORTHO05D010459 6.0e-09 66.6 227 24.2
Thecc.06G088800 Theobroma cacao HOM05D008181 ORTHO05D010459 6.0e-09 66.6 228 24.6
SalBow6G1465 Salvia bowleyana HOM05D009699 ORTHO05D006517 7.9e-09 66.2 208 25.5
Thecc.05G143600 Theobroma cacao HOM05D008181 ORTHO05D021025 7.9e-09 66.2 108 32.4
SalBow4G1733 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.3e-08 65.5 241 25.7
SalBow6G6558 Salvia bowleyana HOM05D010599 ORTHO05D006517 1.3e-08 65.5 132 31.8
SGA_v2.0_scaffold74G24697 Striga asiatica HOM05D011572 ORTHO05D006517 3.0e-08 64.3 65 50.8
Thecc.10G115900 Theobroma cacao HOM05D008181 ORTHO05D010459 3.0e-08 64.3 128 27.3
CANSAT64G2290 Cannabis sativa HOM05D008058 ORTHO05D010564 5.1e-08 63.5 226 26.5
CANSAT56G1907 Cannabis sativa HOM05D008058 ORTHO05D010564 6.7e-08 63.2 140 28.6
PGSC0003DMG400000873 Solanum tuberosum HOM05D000679 ORTHO05D000137 6.7e-08 63.2 237 21.9
CANSAT56G3729 Cannabis sativa HOM05D008058 ORTHO05D010564 1.1e-07 62.4 151 29.1
SalBow4G1236 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.1e-07 62.4 226 24.3
SalBow7G1548 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.5e-07 62.0 219 23.7
SalBow7G3634 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.5e-07 62.0 219 23.7
SGA_v2.0_scaffold844G53665 Striga asiatica HOM05D213144 ORTHO05D006517 1.5e-07 62.0 35 77.1
Lsat_1_v5_gn_8_18001 Lactuca sativa HOM05D009439 ORTHO05D010404 1.9e-07 61.6 150 27.3
Thecc.02G184700 Theobroma cacao HOM05D008181 ORTHO05D021025 1.9e-07 61.6 87 32.2
SalBow1G7890 Salvia bowleyana HOM05D009699 ORTHO05D006517 2.5e-07 61.2 140 27.9
Thecc.06G009500 Theobroma cacao HOM05D008181 ORTHO05D010459 2.5e-07 61.2 109 31.2
CAN.G162.75 Capsicum annuum HOM05D000541 ORTHO05D000137 3.3e-07 60.8 164 28.0
SalBow6G3508 Salvia bowleyana HOM05D008082 ORTHO05D006517 3.3e-07 60.8 261 26.1
SalBow1G2008 Salvia bowleyana HOM05D008082 ORTHO05D006517 4.3e-07 60.5 170 29.4
MELO3C033961.2 Cucumis melo HOM05D010240 ORTHO05D011271 5.7e-07 60.1 196 26.0
CANSAT64G1644 Cannabis sativa HOM05D008058 ORTHO05D010564 7.4e-07 59.7 213 25.4
SalBow5G3432 Salvia bowleyana HOM05D009699 ORTHO05D006517 9.7e-07 59.3 181 25.4
CANSAT56G1868 Cannabis sativa HOM05D008058 ORTHO05D010564 1.3e-06 58.9 226 26.5
CANSAT64G1886 Cannabis sativa HOM05D008058 ORTHO05D010564 1.3e-06 58.9 151 29.1
Thecc.02G219700 Theobroma cacao HOM05D008181 ORTHO05D021025 1.3e-06 58.9 160 23.1
CANSAT25G3402 Cannabis sativa HOM05D008058 ORTHO05D010564 4.8e-06 57.0 153 28.1
SalBow2G0289 Salvia bowleyana HOM05D010599 ORTHO05D006517 4.8e-06 57.0 182 25.8
Thecc.06G050300 Theobroma cacao HOM05D008181 ORTHO05D021025 4.8e-06 57.0 49 42.9
CAN.G179.14 Capsicum annuum HOM05D000541 ORTHO05D000137 6.3e-06 56.6 86 33.7
SGA_v2.0_scaffold12G06007 Striga asiatica HOM05D011572 ORTHO05D006517 6.3e-06 56.6 45 57.8
CANSAT56G1475 Cannabis sativa HOM05D008058 ORTHO05D010564 8.2e-06 56.2 136 30.1
SalBow6G5565 Salvia bowleyana HOM05D010871 ORTHO05D006517 8.2e-06 56.2 109 31.2


User provided reference genes

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