Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 1.3e-179 632.9 314 100.0
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 2.6e-127 459.1 312 73.7
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 9.1e-120 434.1 289 74.4
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 1.5e-114 416.8 308 69.8
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 3.5e-111 405.6 281 71.9
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 5.9e-111 404.8 354 61.3
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 2.9e-110 402.5 281 70.8
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 2.5e-109 399.4 281 69.8
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 5.5e-109 398.3 281 69.8
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 5.5e-109 398.3 281 69.8
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 1.2e-108 397.1 274 71.5
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 6.1e-108 394.8 334 63.2
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.0e-107 394.0 323 65.0
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 6.8e-107 391.3 264 72.7
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 2.6e-106 389.4 316 62.0
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 4.4e-106 388.7 311 64.3
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 4.9e-105 385.2 284 69.0
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 4.9e-105 385.2 312 64.1
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 1.4e-104 383.6 312 65.1
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 1.8e-104 383.3 297 66.7
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 1.8e-104 383.3 292 67.1
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 3.1e-104 382.5 313 63.6
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 2.0e-103 379.8 280 68.9
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 2.7e-103 379.4 287 67.6
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 2.7e-103 379.4 309 65.0
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 7.7e-103 377.9 316 63.0
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 7.7e-103 377.9 302 63.6
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 2.9e-102 375.9 315 62.5
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 3.8e-102 375.6 260 69.6
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 8.6e-102 374.4 316 62.7
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 1.1e-101 374.0 264 72.0
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 2.5e-101 372.9 278 68.3
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 1.6e-100 370.2 318 62.3
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 2.1e-100 369.8 319 61.4
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 2.1e-100 369.8 310 61.6
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 3.6e-100 369.0 256 73.0
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 3.6e-100 369.0 316 61.4
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 1.4e-99 367.1 281 66.5
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 1.4e-99 367.1 286 65.0
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 1.8e-99 366.7 273 67.8
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 5.2e-99 365.2 320 62.8
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 3.4e-98 362.5 296 63.5
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 3.4e-98 362.5 311 62.4
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 3.4e-98 362.5 302 63.2
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 4.4e-98 362.1 288 65.3
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 4.4e-98 362.1 296 64.5
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 7.5e-98 361.3 296 64.5
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 7.5e-98 361.3 318 61.6
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 7.5e-98 361.3 255 69.0
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.3e-97 360.5 274 67.2
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 3.7e-97 359.0 296 64.2
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 3.7e-97 359.0 310 58.7
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.1e-96 357.5 288 64.6
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 1.8e-96 356.7 305 61.0
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 3.2e-96 355.9 313 58.5
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 4.1e-96 355.5 322 59.9
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 4.1e-96 355.5 257 68.1
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 9.2e-96 354.4 303 61.7
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 2.7e-95 352.8 276 65.2
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 3.0e-94 349.4 317 60.3
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 3.0e-94 349.4 321 59.5
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 8.6e-94 347.8 311 58.8
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 3.3e-93 345.9 322 59.6
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 3.6e-92 342.4 316 60.4
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 1.0e-91 340.9 288 60.1
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 1.8e-91 340.1 288 61.8
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 1.8e-91 340.1 294 60.9
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 4.0e-91 339.0 292 61.0
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 8.9e-91 337.8 287 61.0
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 1.2e-90 337.4 272 64.0
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 1.5e-90 337.0 315 59.4
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 1.5e-90 337.0 308 59.1
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 3.4e-90 335.9 224 70.1
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 5.8e-90 335.1 257 66.1
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 7.5e-90 334.7 266 64.3
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 7.5e-90 334.7 317 57.7
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 9.8e-90 334.3 320 57.2
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 2.9e-89 332.8 268 64.6
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 3.7e-89 332.4 315 59.4
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 6.4e-89 331.6 289 59.2
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 6.4e-89 331.6 252 64.3
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 2.4e-88 329.7 289 58.8
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 4.1e-88 328.9 289 59.5
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 4.1e-88 328.9 289 59.5
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 4.1e-88 328.9 264 61.4
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 2.0e-87 326.6 264 64.8
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 3.5e-87 325.9 314 56.7
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 7.8e-87 324.7 259 60.6
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 5.6e-85 318.5 293 59.7
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 1.8e-83 313.5 196 76.5
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.0e-82 310.1 221 70.1
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 5.8e-82 308.5 227 70.0
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.4e-80 303.1 213 71.8
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 2.1e-79 300.1 261 62.1
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 1.9e-77 293.5 264 56.8
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 4.0e-75 285.8 248 62.1
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 6.8e-75 285.0 176 77.3
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 1.3e-70 270.8 176 76.7
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 2.3e-70 270.0 233 63.9
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 8.6e-70 268.1 224 61.2
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 6.6e-62 241.9 187 65.2
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 1.1e-61 241.1 200 57.5
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 1.9e-61 240.4 232 54.3
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 2.1e-60 236.9 198 60.1
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 1.5e-58 230.7 208 57.7
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 3.2e-56 223.0 227 55.9
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 1.0e-54 218.0 209 52.6
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 3.1e-51 206.5 256 45.3
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 2.2e-41 173.7 205 42.9
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 2.2e-41 173.7 157 54.8
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 9.3e-40 168.3 228 39.9
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 1.5e-37 161.0 125 60.8
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 3.2e-32 143.3 120 55.8
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 2.8e-28 130.2 83 73.5
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 3.1e-27 126.7 86 74.4
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 4.1e-27 126.3 96 66.7
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 2.8e-20 103.6 60 81.7
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 2.0e-18 97.4 68 73.5
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 1.0e-06 58.5 37 70.3
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 8.8e-06 55.5 134 29.9


User provided reference genes

Program Settings