Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold205G41734 Striga asiatica HOM05D007214 ORTHO05D008907 1.3e-92 343.6 245 100.0
Migut.H00870 Erythranthe guttata HOM05D007214 ORTHO05D008907 6.8e-46 188.3 264 65.5
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 1.7e-36 157.1 210 63.3
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 3.6e-31 139.4 259 58.3
SalBow1G8362 Salvia bowleyana HOM05D007214 ORTHO05D008907 3.4e-29 132.9 214 64.5
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 1.3e-28 131.0 259 35.5
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 9.2e-27 124.8 256 33.6
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 1.2e-26 124.4 285 32.6
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.1e-26 123.6 274 47.1
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 2.3e-25 120.2 255 54.9
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.8e-23 113.2 278 31.7
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 3.6e-23 112.8 263 30.8
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 1.1e-22 111.3 259 32.0
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 1.8e-22 110.5 211 45.5
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 2.4e-22 110.2 211 46.0
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 1.3e-20 104.4 267 29.2
BcaC06g33744 Brassica carinata HOM05D007214 ORTHO05D008907 6.4e-20 102.1 245 41.6
THA.LOC104805424 Tarenaya hassleriana HOM05D007214 ORTHO05D008907 8.4e-20 101.7 256 52.3
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 3.2e-19 99.8 190 36.3
Nitab4.5_0002265g0100 Nicotiana tabacum HOM05D007214 ORTHO05D008907 5.4e-19 99.0 190 57.9
ECA232G1410 Erigeron canadensis HOM05D007214 ORTHO05D008907 9.2e-19 98.2 266 48.1
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 1.0e-17 94.7 217 32.3
Sp2g17170 Schrenkiella parvula HOM05D007214 ORTHO05D008907 1.3e-17 94.4 256 38.7
CAN.G206.82 Capsicum annuum HOM05D007214 ORTHO05D008907 1.7e-17 94.0 203 53.7
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 3.0e-17 93.2 257 39.7
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 8.7e-17 91.7 259 40.9
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 1.1e-16 91.3 293 30.4
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 1.1e-16 91.3 260 40.8
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 1.5e-16 90.9 217 48.8
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 1.9e-16 90.5 243 28.0
BolC7t44250H Brassica oleracea HOM05D007214 ORTHO05D008907 2.5e-16 90.1 261 38.7
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 5.6e-16 89.0 299 29.8
Cc07_g02800 Coffea canephora HOM05D007214 ORTHO05D008907 7.3e-16 88.6 214 52.3
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 7.3e-16 88.6 226 29.2
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 7.3e-16 88.6 259 25.9
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 1.2e-15 87.8 213 31.0
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 2.1e-15 87.0 208 55.8
BcaC06g30923 Brassica carinata HOM05D007214 ORTHO05D008907 2.8e-15 86.7 268 48.1
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 3.6e-15 86.3 211 35.5
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 4.7e-15 85.9 214 31.3
Oeu060587.1 Olea europaea HOM05D007214 ORTHO05D008907 6.2e-15 85.5 110 49.1
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 1.4e-14 84.3 228 28.5
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 4.0e-14 82.8 214 28.0
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 5.2e-14 82.4 211 43.6
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 6.9e-14 82.0 220 45.0
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 1.2e-13 81.3 241 36.5
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 2.0e-13 80.5 250 27.6
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 2.0e-13 80.5 207 44.0
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 5.8e-13 79.0 219 47.9
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 9.9e-13 78.2 222 27.9
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 1.3e-12 77.8 281 34.2
PGSC0003DMG400001300 Solanum tuberosum HOM05D007214 ORTHO05D008907 2.9e-12 76.6 241 35.3
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 6.4e-12 75.5 210 49.0
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 3.2e-11 73.2 208 48.6
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 5.4e-11 72.4 218 30.3
AT3G28370 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 7.1e-11 72.0 208 44.7
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 7.1e-11 72.0 219 52.1
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 9.3e-11 71.6 207 26.6
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 9.3e-11 71.6 203 27.6
RhsimUnG0169100 Rhododendron simsii HOM05D007214 ORTHO05D008907 9.3e-11 71.6 216 48.6
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 1.2e-10 71.2 229 27.1
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 1.6e-10 70.9 216 30.6
TAR629G1667 Trochodendron aralioides HOM05D000068 ORTHO05D000084 2.7e-10 70.1 193 48.2
MSTRG.23970 Avicennia marina HOM05D007214 ORTHO05D008907 3.5e-10 69.7 46 78.3
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 4.6e-10 69.3 218 28.9
AL5G17980 Arabidopsis lyrata HOM05D007214 ORTHO05D008907 6.0e-10 68.9 215 46.5
Thhalv10004882m.g Eutrema salsugineum HOM05D007214 ORTHO05D008907 6.0e-10 68.9 208 54.8
Dinv35004 Davidia involucrata HOM05D007214 ORTHO05D008907 7.8e-10 68.6 167 55.7
Lsat_1_v5_gn_4_180400 Lactuca sativa HOM05D007214 ORTHO05D008907 3.0e-09 66.6 208 47.6
Eucgr.J02159 Eucalyptus grandis HOM05D007214 ORTHO05D008907 3.9e-09 66.2 48 68.8
Oeu060589.1 Olea europaea HOM05D007214 ORTHO05D008907 3.9e-09 66.2 40 85.0
Carub.0005s0686 Capsella rubella HOM05D007214 ORTHO05D008907 5.1e-09 65.9 208 46.6
GSVIVG01032574001 Vitis vinifera HOM05D007214 ORTHO05D008907 6.6e-09 65.5 46 69.6
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 2.5e-08 63.5 126 50.8
Gohir.D07G223900 Gossypium hirsutum HOM05D007214 ORTHO05D008907 4.3e-08 62.8 189 50.8
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 5.6e-08 62.4 47 63.8
Cpa.g.sc14.68 Carica papaya HOM05D007214 ORTHO05D008907 1.3e-07 61.2 48 60.4
unitig_746.g26578 Utricularia gibba HOM05D007214 ORTHO05D008907 2.8e-07 60.1 49 65.3
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 4.8e-07 59.3 219 28.3
COL.COLO4_36999 Corchorus olitorius HOM05D007214 ORTHO05D008907 6.2e-07 58.9 205 53.2
Rhsim10G0029100 Rhododendron simsii HOM05D007214 ORTHO05D008907 6.2e-07 58.9 127 31.5
Sabra07G0063000 Salix brachista HOM05D007214 ORTHO05D008907 6.2e-07 58.9 48 60.4
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 8.1e-07 58.5 210 50.0
DCAR_011179 Daucus carota HOM05D007214 ORTHO05D008907 1.1e-06 58.2 48 64.6
MBI15_g38192_MAGBIO Magnolia biondii HOM05D007214 ORTHO05D008907 3.1e-06 56.6 47 59.6
Psat3g176600 Pisum sativum HOM05D007214 ORTHO05D008907 3.1e-06 56.6 100 32.0
TAR629G0039 Trochodendron aralioides HOM05D000068 ORTHO05D008907 4.0e-06 56.2 48 58.3
HPP92_010494 Vanilla planifolia HOM05D007214 ORTHO05D008907 5.3e-06 55.8 227 26.0


User provided reference genes

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