Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold204G41677 Striga asiatica HOM05D007347 ORTHO05D009296 5.6e-267 923.7 463 100.0
SGA_v2.0_scaffold204G41666 Striga asiatica HOM05D007347 ORTHO05D009296 7.6e-22 109.4 141 48.2
SGA_v2.0_scaffold653G53371 Striga asiatica HOM05D007347 ORTHO05D403333 2.9e-21 107.5 58 94.8
SGA_v2.0_scaffold4G02364 Striga asiatica HOM05D007347 ORTHO05D009296 1.3e-18 98.6 131 47.3
Migut.H00560 Erythranthe guttata HOM05D007347 ORTHO05D009296 1.7e-18 98.2 143 42.7
MSTRG.24902 Avicennia marina HOM05D007347 ORTHO05D009296 2.9e-13 80.9 52 65.4
Prupe.6G186200 Prunus persica HOM05D007347 ORTHO05D009296 2.9e-13 80.9 133 39.8
MD15G1324700 Malus domestica HOM05D007347 ORTHO05D009296 4.9e-13 80.1 140 39.3
SalBow1G8225 Salvia bowleyana HOM05D007347 ORTHO05D009296 8.4e-13 79.3 52 71.2
CAN.G71.18 Capsicum annuum HOM05D007347 ORTHO05D009296 1.1e-12 79.0 120 38.3
Ciclev10011342m.g Citrus clementina HOM05D007347 ORTHO05D009296 1.9e-12 78.2 51 64.7
Dinv34879 Davidia involucrata HOM05D007347 ORTHO05D009296 3.2e-12 77.4 52 65.4
Solyc04g050550.3 Solanum lycopersicum HOM05D007347 ORTHO05D009296 5.4e-12 76.6 114 36.0
COL.COLO4_37044 Corchorus olitorius HOM05D007347 ORTHO05D009296 9.3e-12 75.9 147 33.3
Actinidia18106 Actinidia chinensis HOM05D007347 ORTHO05D009296 1.6e-11 75.1 52 61.5
Nitab4.5_0007154g0010 Nicotiana tabacum HOM05D007347 ORTHO05D009296 1.6e-11 75.1 52 59.6
Sopen04g021380 Solanum pennellii HOM05D007347 ORTHO05D009296 1.6e-11 75.1 114 35.1
CSS0000287 Camellia sinensis var. sinensis HOM05D007347 ORTHO05D009296 7.9e-11 72.8 52 61.5
CSS0049471 Camellia sinensis var. sinensis HOM05D007347 ORTHO05D009296 7.9e-11 72.8 52 61.5
Hma1.2p1_1364F.1_g278380 Hydrangea macrophylla HOM05D007347 ORTHO05D009296 7.9e-11 72.8 52 59.6
Atru.chr10.1870 Acer truncatum HOM05D007347 ORTHO05D009296 1.3e-10 72.0 123 37.4
Lj4P128T51 Lonicera japonica HOM05D007347 ORTHO05D009296 3.9e-10 70.5 52 57.7
DCAR_010986 Daucus carota HOM05D007347 ORTHO05D009296 5.1e-10 70.1 51 54.9
COL.COLO4_23655 Corchorus olitorius HOM05D007347 ORTHO05D009296 6.7e-10 69.7 123 34.1
Eucgr.I02100 Eucalyptus grandis HOM05D007347 ORTHO05D009296 6.7e-10 69.7 137 33.6
Thecc.04G145700 Theobroma cacao HOM05D007347 ORTHO05D009296 6.7e-10 69.7 52 59.6
Oeu033427.1 Olea europaea HOM05D007347 ORTHO05D009296 8.7e-10 69.3 51 60.8
Duzib138G0808 Durio zibethinus HOM05D007347 ORTHO05D009296 1.9e-09 68.2 52 55.8
Sed0006376 Sechium edule HOM05D007347 ORTHO05D009296 1.9e-09 68.2 147 31.3
RcHm_v2.0_Chr2g0114451 Rosa chinensis HOM05D007347 ORTHO05D009296 4.3e-09 67.0 66 48.5
CiPaw.03G007800 Carya illinoinensis HOM05D007347 ORTHO05D009296 7.4e-09 66.2 52 55.8
Rhsim10G0062500 Rhododendron simsii HOM05D007347 ORTHO05D009296 7.4e-09 66.2 46 60.9
RcHm_v2.0_Chr6g0269561 Rosa chinensis HOM05D007347 ORTHO05D009296 7.4e-09 66.2 66 48.5
Manes.18G103700 Manihot esculenta HOM05D007347 ORTHO05D009296 9.6e-09 65.9 52 55.8
FvH4_1g20970 Fragaria vesca HOM05D007347 ORTHO05D009296 1.6e-08 65.1 53 54.7
FAN19G1358 Fragaria x ananassa HOM05D007347 ORTHO05D009296 1.6e-08 65.1 53 54.7
FAN23G0923 Fragaria x ananassa HOM05D007347 ORTHO05D009296 1.6e-08 65.1 53 54.7
FAN26G2104 Fragaria x ananassa HOM05D007347 ORTHO05D009296 1.6e-08 65.1 53 54.7
Peaxi162Scf00004g02628 Petunia axillaris HOM05D007347 ORTHO05D009296 1.6e-08 65.1 104 40.4
BcaB06g27240 Brassica carinata HOM05D007347 ORTHO05D009296 2.1e-08 64.7 112 36.6
CANSAT64G0714 Cannabis sativa HOM05D007347 ORTHO05D009296 3.7e-08 63.9 50 50.0
Potri.017G108600 Populus trichocarpa HOM05D007347 ORTHO05D009296 3.7e-08 63.9 48 56.2
CDE05G1387 Ceratophyllum demersum HOM05D007347 ORTHO05D009296 1.4e-07 62.0 135 28.9
GSVIVG01036486001 Vitis vinifera HOM05D007347 ORTHO05D009296 1.4e-07 62.0 52 55.8
TAR371G0226 Trochodendron aralioides HOM05D007347 ORTHO05D009296 2.4e-07 61.2 52 46.2
TAR629G3514 Trochodendron aralioides HOM05D007347 ORTHO05D009296 2.4e-07 61.2 52 46.2
HanXRQChr14g0448021 Helianthus annuus HOM05D007347 ORTHO05D009296 3.1e-07 60.8 50 52.0
Cc07_g04830 Coffea canephora HOM05D007347 ORTHO05D009296 4.0e-07 60.5 51 54.9
THA.LOC104805542 Tarenaya hassleriana HOM05D007347 ORTHO05D009296 6.9e-07 59.7 47 55.3
Aa31LG9G16920 Aethionema arabicum HOM05D007347 ORTHO05D009296 1.2e-06 58.9 52 48.1
Ah.16g102100 Amaranthus hybridus HOM05D007347 ORTHO05D009296 1.2e-06 58.9 52 50.0
CsaV3_5G013240 Cucumis sativus L. HOM05D007347 ORTHO05D009296 1.2e-06 58.9 119 35.3
Manes.02G063016 Manihot esculenta HOM05D002460 ORTHO05D002716 1.2e-06 58.9 52 50.0
QL06p007153 Quercus lobata HOM05D007347 ORTHO05D009296 1.2e-06 58.9 52 48.1
Aqoxy3G04330 Aquilegia oxysepala HOM05D007347 ORTHO05D009296 2.6e-06 57.8 52 42.3
ClCG11G001180 Citrullus lanatus HOM05D007347 ORTHO05D009296 2.6e-06 57.8 50 52.0
Nn3g18549 Nelumbo nucifera HOM05D007347 ORTHO05D009296 2.6e-06 57.8 51 45.1
Gohir.D02G204900 Gossypium hirsutum HOM05D007347 ORTHO05D009296 3.4e-06 57.4 53 50.9
Gorai.005G232200 Gossypium raimondii HOM05D007347 ORTHO05D009296 3.4e-06 57.4 53 50.9
MELO3C026797.2 Cucumis melo HOM05D007347 ORTHO05D009296 4.5e-06 57.0 119 34.5
MBI03_g44528_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 4.5e-06 57.0 51 45.1
Cpa.g.sc16.131 Carica papaya HOM05D007347 ORTHO05D009296 7.6e-06 56.2 52 44.2


User provided reference genes

Program Settings