Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold204G41658 Striga asiatica HOM05D004071 ORTHO05D004501 3.4e-184 648.3 347 100.0
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 1.6e-154 549.7 351 82.3
SalBow1G4702 Salvia bowleyana HOM05D004071 ORTHO05D004501 2.9e-151 538.9 350 82.3
SalBow1G4945 Salvia bowleyana HOM05D004071 ORTHO05D004501 2.5e-150 535.8 350 82.0
Oeu032872.2 Olea europaea HOM05D004071 ORTHO05D004501 3.9e-148 528.5 347 74.4
Oeu049330.1 Olea europaea HOM05D004071 ORTHO05D004501 3.9e-148 528.5 343 74.3
Migut.H00537 Erythranthe guttata HOM05D004071 ORTHO05D004501 3.3e-147 525.4 349 80.8
Migut.K00863 Erythranthe guttata HOM05D004071 ORTHO05D004501 4.3e-147 525.0 344 75.9
MSTRG.23829 Avicennia marina HOM05D004071 ORTHO05D004501 5.7e-147 524.6 349 77.1
Oeu025120.1 Olea europaea HOM05D004071 ORTHO05D004501 2.8e-146 522.3 342 78.7
Atru.chr10.1868 Acer truncatum HOM05D004071 ORTHO05D004501 2.2e-143 512.7 343 71.1
Cfa007968 Carpinus fangiana HOM05D004071 ORTHO05D004501 5.0e-143 511.5 347 74.4
Ciclev10012116m.g Citrus clementina HOM05D004071 ORTHO05D004501 7.2e-142 507.7 343 70.6
MD17G1072900 Malus domestica HOM05D004071 ORTHO05D004501 3.6e-141 505.4 343 71.4
CiPaw.04G003700 Carya illinoinensis HOM05D004071 ORTHO05D004501 6.1e-141 504.6 347 71.2
COL.COLO4_04619 Corchorus olitorius HOM05D004071 ORTHO05D004501 7.9e-141 504.2 343 72.6
Duzib268G0320 Durio zibethinus HOM05D004071 ORTHO05D004501 1.4e-140 503.4 343 77.3
Peaxi162Scf01056g00238 Petunia axillaris HOM05D004071 ORTHO05D004501 1.8e-140 503.1 345 75.9
Thecc.04G143800 Theobroma cacao HOM05D004071 ORTHO05D004501 1.8e-140 503.1 343 71.7
Solyc03g045090.3 Solanum lycopersicum HOM05D004071 ORTHO05D004501 6.7e-140 501.1 349 76.8
CiPaw.03G006000 Carya illinoinensis HOM05D004071 ORTHO05D004501 2.5e-139 499.2 347 72.0
Cc07_g04980 Coffea canephora HOM05D004071 ORTHO05D004501 5.7e-139 498.0 346 72.5
Dinv34868 Davidia involucrata HOM05D004071 ORTHO05D004501 5.7e-139 498.0 344 76.7
Hma1.2p1_0550F.1_g177140 Hydrangea macrophylla HOM05D004071 ORTHO05D004501 5.7e-139 498.0 344 73.0
CANSAT64G0921 Cannabis sativa HOM05D004071 ORTHO05D004501 9.7e-139 497.3 346 70.2
Potri.004G104900 Populus trichocarpa HOM05D004071 ORTHO05D004501 6.3e-138 494.6 347 69.7
Prupe.3G241500 Prunus persica HOM05D004071 ORTHO05D004501 8.2e-138 494.2 343 70.3
Sopen03g009550 Solanum pennellii HOM05D004071 ORTHO05D004501 1.4e-137 493.4 349 76.8
PGSC0003DMG400018768 Solanum tuberosum HOM05D004071 ORTHO05D004501 1.4e-137 493.4 350 71.4
Gorai.001G082400 Gossypium raimondii HOM05D004071 ORTHO05D004501 1.8e-137 493.0 344 69.8
Lsat_1_v5_gn_4_175840 Lactuca sativa HOM05D004071 ORTHO05D004501 1.8e-137 493.0 346 78.3
Phvul.004G073300 Phaseolus vulgaris HOM05D004071 ORTHO05D004501 4.1e-137 491.9 344 69.5
Gohir.D07G183200 Gossypium hirsutum HOM05D004071 ORTHO05D004501 5.3e-137 491.5 343 69.7
CAN.G153.14 Capsicum annuum HOM05D004071 ORTHO05D004501 6.9e-137 491.1 351 70.1
Glyma.13G047900 Glycine max HOM05D004071 ORTHO05D004501 9.1e-137 490.7 344 69.5
Gohir.A07G073300 Gossypium hirsutum HOM05D004071 ORTHO05D004501 9.1e-137 490.7 341 68.9
Gorai.001G203600 Gossypium raimondii HOM05D004071 ORTHO05D004501 1.5e-136 490.0 343 69.4
Ca_14084_v3 Cicer arietinum L. HOM05D004071 ORTHO05D004501 2.0e-136 489.6 349 71.9
Gohir.A08G037600 Gossypium hirsutum HOM05D004071 ORTHO05D004501 3.4e-136 488.8 343 77.0
Lj2g0019369 Lotus japonicus HOM05D004071 ORTHO05D004501 7.7e-136 487.6 344 68.6
ECA232G0981 Erigeron canadensis HOM05D004071 ORTHO05D004501 1.3e-135 486.9 347 75.8
Gohir.A07G176100 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.3e-135 486.9 343 68.8
HanXRQChr09g0263441 Helianthus annuus HOM05D004071 ORTHO05D004501 1.7e-135 486.5 341 76.0
MD09G1082200 Malus domestica HOM05D004071 ORTHO05D004501 2.2e-135 486.1 344 68.3
Psat1g062200 Pisum sativum HOM05D004071 ORTHO05D004501 2.2e-135 486.1 349 67.0
CSS0015718 Camellia sinensis var. sinensis HOM05D004071 ORTHO05D004501 3.8e-135 485.3 344 69.2
Gohir.D07G078000 Gossypium hirsutum HOM05D004071 ORTHO05D004501 3.8e-135 485.3 360 66.7
TAR622G0876 Trochodendron aralioides HOM05D004071 ORTHO05D004501 1.4e-134 483.4 339 69.9
TPR.G9685 Trifolium pratense HOM05D004071 ORTHO05D004501 1.9e-134 483.0 346 66.2
Gorai.004G047400 Gossypium raimondii HOM05D004071 ORTHO05D004501 2.5e-134 482.6 343 76.4
Lsat_1_v5_gn_2_86560 Lactuca sativa HOM05D004071 ORTHO05D004501 2.5e-134 482.6 343 69.1
Cpa.g.sc179.42 Carica papaya HOM05D004071 ORTHO05D004501 4.2e-134 481.9 347 68.9
Gohir.D08G047900 Gossypium hirsutum HOM05D004071 ORTHO05D004501 5.5e-134 481.5 343 75.8
arahy.Tifrunner.gnm1.ann1.UUQR92 Arachis hypogaea HOM05D004071 ORTHO05D004501 1.4e-132 476.9 342 69.0
arahy.Tifrunner.gnm1.ann1.SG5ZZ4 Arachis hypogaea HOM05D004071 ORTHO05D004501 1.8e-132 476.5 342 69.0
FAN09G0395 Fragaria x ananassa HOM05D000085 ORTHO05D004501 1.8e-132 476.5 343 69.1
TAR629G1013 Trochodendron aralioides HOM05D004071 ORTHO05D004501 3.9e-132 475.3 342 73.1
MBI16_g36053_MAGBIO Magnolia biondii HOM05D004071 ORTHO05D004501 1.1e-131 473.8 368 64.9
VMungo0464G1781 Vigna mungo HOM05D004071 ORTHO05D004501 1.1e-131 473.8 344 73.8
GSVIVG01036463001 Vitis vinifera HOM05D004071 ORTHO05D004501 1.1e-131 473.8 341 74.2
Medtr6g016780 Medicago truncatula HOM05D004071 ORTHO05D004501 1.5e-131 473.4 350 67.1
Actinidia26308 Actinidia chinensis HOM05D004071 ORTHO05D004501 5.7e-131 471.5 344 73.5
Hund13742 Selenicereus undatus HOM05D004071 ORTHO05D004501 1.3e-130 470.3 346 66.2
CARHR076390 Cardamine hirsuta HOM05D004071 ORTHO05D004501 1.7e-130 469.9 342 67.8
CsaV3_5G039030 Cucumis sativus L. HOM05D004071 ORTHO05D004501 2.2e-130 469.5 345 68.1
ClCG11G005270 Citrullus lanatus HOM05D004071 ORTHO05D004501 4.8e-130 468.4 343 69.7
Aqoxy3G00414 Aquilegia oxysepala HOM05D004071 ORTHO05D004501 6.3e-130 468.0 344 66.9
arahy.Tifrunner.gnm1.ann1.85GVTZ Arachis hypogaea HOM05D004071 ORTHO05D004501 6.3e-130 468.0 343 65.6
Lj4A130T17 Lonicera japonica HOM05D004071 ORTHO05D004501 8.2e-130 467.6 346 74.0
PSO063G1546 Papaver somniferum HOM05D004071 ORTHO05D004501 8.2e-130 467.6 342 72.8
TWI74G0934 Tripterygium wilfordii HOM05D004071 ORTHO05D004501 8.2e-130 467.6 343 74.9
MELO3C022067.2 Cucumis melo HOM05D004071 ORTHO05D004501 1.4e-129 466.8 344 66.6
PSO782G5396 Papaver somniferum HOM05D004071 ORTHO05D004501 1.4e-129 466.8 342 69.6
Sed0017773 Sechium edule HOM05D004071 ORTHO05D004501 1.4e-129 466.8 343 66.2
RcHm_v2.0_Chr2g0163461 Rosa chinensis HOM05D004071 ORTHO05D004501 1.8e-129 466.5 347 73.8
FAN05G3345 Fragaria x ananassa HOM05D004071 ORTHO05D004501 2.4e-129 466.1 343 73.5
Rhsim08G0080100 Rhododendron simsii HOM05D004071 ORTHO05D004501 2.4e-129 466.1 347 71.2
FvH4_6g45520 Fragaria vesca HOM05D004071 ORTHO05D004501 7.0e-129 464.5 343 72.6
FAN02G1076 Fragaria x ananassa HOM05D000085 ORTHO05D004501 7.0e-129 464.5 342 72.8
PGR042G1023 Punica granatum HOM05D004071 ORTHO05D004501 7.0e-129 464.5 343 70.6
EL10Ac2g04623 Beta vulgaris HOM05D004071 ORTHO05D004501 1.2e-128 463.8 348 71.3
THA.LOC104827150 Tarenaya hassleriana HOM05D004071 ORTHO05D004501 2.6e-128 462.6 342 68.4
FAN14G5468 Fragaria x ananassa HOM05D000085 ORTHO05D004501 3.5e-128 462.2 342 72.5
DCAR_007521 Daucus carota HOM05D000912 ORTHO05D004501 7.7e-128 461.1 341 64.2
Manes.02G065500 Manihot esculenta HOM05D004071 ORTHO05D004501 3.8e-127 458.8 345 66.1
Nn3g17651 Nelumbo nucifera HOM05D004071 ORTHO05D004501 4.2e-126 455.3 342 64.6
Ah.16g102220 Amaranthus hybridus HOM05D004071 ORTHO05D004501 1.8e-124 449.9 344 70.9
Lalb_Chr17g0336551 Lupinus albus HOM05D004071 ORTHO05D004501 7.4e-123 444.5 341 70.4
AUR62008952 Chenopodium quinoa HOM05D004071 ORTHO05D004501 9.7e-123 444.1 343 66.5
HanXRQChr07g0200191 Helianthus annuus HOM05D004071 ORTHO05D004501 6.3e-122 441.4 342 65.2
Sed0022702 Sechium edule HOM05D004071 ORTHO05D004501 2.4e-121 439.5 324 64.5
CDE08G1388 Ceratophyllum demersum HOM05D004071 ORTHO05D004501 3.1e-121 439.1 342 63.2
Actinidia36304 Actinidia chinensis HOM05D004071 ORTHO05D004501 4.1e-121 438.7 344 63.7
HPP92_011599 Vanilla planifolia HOM05D004071 ORTHO05D004501 1.2e-120 437.2 344 61.3
Hma1.2p1_0136F.1_g061955 Hydrangea macrophylla HOM05D004071 ORTHO05D004501 1.3e-119 433.7 307 70.0
Rhsim10G0064500 Rhododendron simsii HOM05D004071 ORTHO05D004501 1.7e-119 433.3 342 64.3
Duzib133G0960 Durio zibethinus HOM05D004071 ORTHO05D004501 2.2e-119 433.0 343 65.0
Sabra04G0076900 Salix brachista HOM05D004071 ORTHO05D004501 1.1e-118 430.6 443 52.4
unitig_62.g23397 Utricularia gibba HOM05D004071 ORTHO05D004501 5.5e-118 428.3 350 63.1
Potri.017G110600 Populus trichocarpa HOM05D004071 ORTHO05D004501 2.1e-117 426.4 343 62.7
Nitab4.5_0004420g0040 Nicotiana tabacum HOM05D004071 ORTHO05D004501 4.7e-117 425.2 351 63.5
AUR62014550 Chenopodium quinoa HOM05D004071 ORTHO05D004501 1.4e-116 423.7 357 62.7
Nn4g23653 Nelumbo nucifera HOM05D004071 ORTHO05D004501 5.2e-116 421.8 305 75.1
Os01g0604700 Oryza sativa ssp. japonica HOM05D004071 ORTHO05D004501 5.2e-116 421.8 355 56.6
CDE06G1497 Ceratophyllum demersum HOM05D004071 ORTHO05D004501 1.5e-115 420.2 341 66.6
Os05g0589000 Oryza sativa ssp. japonica HOM05D004071 ORTHO05D004501 1.5e-115 420.2 345 62.6
Carub.0003s0151 Capsella rubella HOM05D004071 ORTHO05D004501 2.0e-115 419.9 347 63.1
PGSC0003DMG400010091 Solanum tuberosum HOM05D004071 ORTHO05D004501 2.0e-115 419.9 345 62.6
Zm00001eb161490 Zea mays HOM05D004071 ORTHO05D004501 3.7e-114 415.6 342 57.3
TWI77G0983 Tripterygium wilfordii HOM05D004071 ORTHO05D004501 6.3e-114 414.8 343 60.9
AT3G02420 Arabidopsis thaliana HOM05D004071 ORTHO05D004501 8.3e-114 414.5 347 60.5
BcaB04g21412 Brassica carinata HOM05D004071 ORTHO05D004501 1.8e-113 413.3 344 61.6
Thhalv10021061m.g Eutrema salsugineum HOM05D004071 ORTHO05D004501 1.8e-113 413.3 341 61.6
Zm00001eb297500 Zea mays HOM05D004071 ORTHO05D004501 1.8e-113 413.3 348 64.4
BcaC09g47699 Brassica carinata HOM05D004071 ORTHO05D004501 4.1e-113 412.1 342 59.6
HPP92_003788 Vanilla planifolia HOM05D004071 ORTHO05D004501 7.0e-113 411.4 344 57.8
Sp3g01460 Schrenkiella parvula HOM05D004071 ORTHO05D004501 5.9e-112 408.3 342 58.5
unitig_32.g10761 Utricularia gibba HOM05D004071 ORTHO05D004501 7.7e-112 407.9 345 64.6
PSO017G6828 Papaver somniferum HOM05D004071 ORTHO05D004501 1.3e-111 407.1 342 56.4
BcaC05g30354 Brassica carinata HOM05D004071 ORTHO05D004501 1.7e-111 406.8 342 58.8
PGR004G2426 Punica granatum HOM05D004071 ORTHO05D004501 1.7e-111 406.8 289 70.2
CSS0021599 Camellia sinensis var. sinensis HOM05D004071 ORTHO05D004501 8.5e-111 404.4 237 81.0
Aa31LG5G12930 Aethionema arabicum HOM05D004071 ORTHO05D004501 1.1e-110 404.1 342 60.2
BraA05t23141Z Brassica rapa HOM05D004071 ORTHO05D004501 2.5e-110 402.9 342 58.5
PSO478G0222 Papaver somniferum HOM05D004071 ORTHO05D004501 4.2e-110 402.1 343 54.8
vmacro18101 Vaccinium macrocarpon HOM05D004071 ORTHO05D004501 8.0e-109 397.9 344 58.1
Hund16109 Selenicereus undatus HOM05D004071 ORTHO05D004501 2.3e-108 396.4 351 58.7
ClCG05G012000 Citrullus lanatus HOM05D004071 ORTHO05D004501 4.4e-107 392.1 342 55.8
SEGI_38032 Sequoiadendron giganteum HOM05D004071 ORTHO05D004501 9.8e-107 391.0 337 62.3
Glyma.19G043700 Glycine max HOM05D004071 ORTHO05D004501 1.7e-106 390.2 292 69.9
vmacro05581 Vaccinium macrocarpon HOM05D004071 ORTHO05D004501 1.4e-105 387.1 428 55.1
Sed0014814 Sechium edule HOM05D004071 ORTHO05D004501 2.0e-104 383.3 342 54.7
TAR371G1199 Trochodendron aralioides HOM05D004071 ORTHO05D004501 2.8e-101 372.9 292 63.4
Nitab4.5_0009272g0060 Nicotiana tabacum HOM05D004071 ORTHO05D004501 1.4e-97 360.5 359 56.0
Peaxi162Scf00479g00310 Petunia axillaris HOM05D004071 ORTHO05D004501 2.5e-94 349.7 295 68.8
AagrBONN_evm.TU.Sc2ySwM_117.1813 Anthoceros agrestis HOM05D004071 ORTHO05D004501 5.8e-91 338.6 335 49.3
AL3G11710 Arabidopsis lyrata HOM05D004071 ORTHO05D004501 1.3e-90 337.4 304 57.2
ATR0730G004 Amborella trichopoda HOM05D004071 ORTHO05D004501 4.1e-89 332.4 277 66.8
Sc10g0001400 Simmondsia chinensis HOM05D004071 ORTHO05D004501 2.0e-88 330.1 245 66.5
SMO164G0101 Selaginella moellendorffii HOM05D004071 ORTHO05D004501 2.3e-87 326.6 337 51.3
BolC5t35082H Brassica oleracea HOM05D004071 ORTHO05D007018 1.6e-85 320.5 323 53.3
Eucgr.I02122 Eucalyptus grandis HOM05D004071 ORTHO05D004501 2.8e-85 319.7 241 69.7
QL02p053393 Quercus lobata HOM05D004071 ORTHO05D004501 1.1e-84 317.8 243 70.8
Gohir.A13G091200 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.8e-84 317.0 215 74.4
Dinv33918 Davidia involucrata HOM05D004071 ORTHO05D004501 2.6e-83 313.2 187 81.3
Mapoly0013s0171 Marchantia polymorpha HOM05D004071 ORTHO05D004501 3.4e-83 312.8 339 42.8
Nitab4.5_0000612g0160 Nicotiana tabacum HOM05D004071 ORTHO05D004501 5.8e-83 312.0 347 50.1
arahy.Tifrunner.gnm1.ann1.2VHL38 Arachis hypogaea HOM05D004071 ORTHO05D004501 1.4e-81 307.4 244 61.9
Lj7A9T84 Lonicera japonica HOM05D004071 ORTHO05D004501 3.2e-81 306.2 224 69.6
Pp3c7_9290 Physcomitrium patens HOM05D004071 ORTHO05D004501 2.5e-78 296.6 343 44.3
C09p75710 Brassica napus HOM05D002308 ORTHO05D002535 1.4e-76 290.8 285 53.3
A05p45210 Brassica napus HOM05D002308 ORTHO05D007018 1.8e-76 290.4 288 53.1
Zm00001eb158750 Zea mays HOM05D004071 ORTHO05D004501 2.0e-75 287.0 237 57.8
Os01g0641700 Oryza sativa ssp. japonica HOM05D004071 ORTHO05D004501 2.4e-73 280.0 235 58.3
DCAR_010977 Daucus carota HOM05D004071 ORTHO05D004501 5.1e-71 272.3 338 47.6
CDE05G2628 Ceratophyllum demersum HOM05D004071 ORTHO05D004501 5.2e-68 262.3 230 53.9
BraSC141t45626Z Brassica rapa HOM05D004071 ORTHO05D004501 5.8e-67 258.8 240 54.6
TPR.G28780 Trifolium pratense HOM05D004071 ORTHO05D004501 1.4e-65 254.2 145 80.7
SHI25579 Sapria himalayana HOM05D004071 ORTHO05D004501 1.2e-64 251.1 225 54.7
BNapus_Darmor_BZH_scaffold_208p00070 Brassica napus HOM05D004071 ORTHO05D004501 7.8e-64 248.4 242 57.9
BolC1t05906H Brassica oleracea HOM05D004071 ORTHO05D004501 1.1e-62 244.6 241 51.5
Nitab4.5_0003161g0040 Nicotiana tabacum HOM05D004071 ORTHO05D004501 3.4e-59 233.0 130 83.1
Gohir.A03G111050 Gossypium hirsutum HOM05D004071 ORTHO05D004501 6.9e-52 208.8 140 73.6
Gohir.A04G081800 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.0e-42 178.3 115 78.3
Gohir.A13G168300 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.0e-42 178.3 112 78.6
QL02p053385 Quercus lobata HOM05D004071 ORTHO05D004501 1.0e-42 178.3 105 79.0
unitig_52.g17623 Utricularia gibba HOM05D004071 ORTHO05D004501 3.0e-39 166.8 134 62.7
Dinv33917 Davidia involucrata HOM05D004071 ORTHO05D004501 5.3e-28 129.4 82 69.5
CBR_g39496 Chara braunii HOM05D004071 ORTHO05D004501 1.4e-23 114.8 149 36.2
Solyc02g089780.3 Solanum lycopersicum HOM05D004071 ORTHO05D004501 1.4e-23 114.8 343 25.9
Actinidia17620 Actinidia chinensis HOM05D004071 ORTHO05D004501 5.1e-23 112.8 73 64.4
Gohir.A10G225466 Gossypium hirsutum HOM05D004071 ORTHO05D004501 8.5e-18 95.5 57 77.2
SEGI_19153 Sequoiadendron giganteum HOM05D004071 ORTHO05D004501 1.4e-17 94.7 54 70.4
arahy.Tifrunner.gnm1.ann1.FI956K Arachis hypogaea HOM05D004071 ORTHO05D004501 7.4e-14 82.4 140 37.9
HanXRQChr02g0053871 Helianthus annuus HOM05D004071 ORTHO05D004501 2.6e-11 73.9 103 43.7
BcaC02g08620 Brassica carinata HOM05D004071 ORTHO05D004501 2.1e-08 64.3 45 71.1
CBR_g42155 Chara braunii HOM05D004071 ORTHO05D004501 3.3e-06 57.0 66 37.9


User provided reference genes

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