Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold204G41644 Striga asiatica HOM05D007242 ORTHO05D009089 3.2e-251 871.7 582 100.0
MSTRG.2935 Avicennia marina HOM05D007242 ORTHO05D009089 2.1e-133 480.3 587 67.1
Migut.H00525 Erythranthe guttata HOM05D007242 ORTHO05D009089 2.1e-133 480.3 577 68.5
Oeu038867.1 Olea europaea HOM05D007242 ORTHO05D009089 1.4e-121 441.0 521 67.9
SalBow1G2223 Salvia bowleyana HOM05D007242 ORTHO05D009089 9.3e-118 428.3 522 67.8
Rhsim08G0035000 Rhododendron simsii HOM05D007242 ORTHO05D009089 1.0e-108 398.3 540 65.6
CAN.G1204.3 Capsicum annuum HOM05D007242 ORTHO05D009089 1.5e-107 394.4 532 55.3
Lj2C896T5 Lonicera japonica HOM05D007242 ORTHO05D009089 4.8e-106 389.4 542 53.7
CSS0024550 Camellia sinensis var. sinensis HOM05D007242 ORTHO05D009089 4.0e-105 386.3 539 64.0
Potri.005G127500 Populus trichocarpa HOM05D007242 ORTHO05D009089 5.3e-105 386.0 556 61.0
Prupe.7G148400 Prunus persica HOM05D007242 ORTHO05D009089 9.0e-105 385.2 532 63.0
Hma1.2p1_0939F.1_g239400 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 1.2e-104 384.8 524 64.9
MD15G1269300 Malus domestica HOM05D007242 ORTHO05D009089 2.0e-104 384.0 541 61.2
Haze_18840 Corylus avellana HOM05D007242 ORTHO05D009089 5.8e-104 382.5 530 63.4
Atru.chr3.510 Acer truncatum HOM05D007242 ORTHO05D009089 7.6e-104 382.1 541 51.0
Ciclev10027297m.g Citrus clementina HOM05D007242 ORTHO05D009089 7.6e-104 382.1 519 58.0
Lj2A917T62 Lonicera japonica HOM05D007242 ORTHO05D009089 2.2e-103 380.6 542 52.8
GSVIVG01019029001 Vitis vinifera HOM05D007242 ORTHO05D009089 4.9e-103 379.4 554 55.6
Manes.13G136000 Manihot esculenta HOM05D007242 ORTHO05D009089 8.4e-103 378.6 561 61.1
QL12p024714 Quercus lobata HOM05D007242 ORTHO05D009089 7.9e-101 372.1 515 63.1
Peaxi162Scf00075g00618 Petunia axillaris HOM05D007242 ORTHO05D009089 1.0e-100 371.7 518 64.3
Sopen01g004000 Solanum pennellii HOM05D007242 ORTHO05D009089 1.5e-99 367.9 541 61.4
Solyc01g008480.4 Solanum lycopersicum HOM05D007242 ORTHO05D009089 1.9e-99 367.5 541 61.2
Gorai.007G051500 Gossypium raimondii HOM05D007242 ORTHO05D009089 4.3e-99 366.3 546 61.7
Hma1.2p1_0268F.1_g107710 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 4.3e-99 366.3 524 63.7
Phvul.002G329700 Phaseolus vulgaris HOM05D007242 ORTHO05D009089 5.6e-99 365.9 527 62.4
arahy.Tifrunner.gnm1.ann1.79NCEV Arachis hypogaea HOM05D007242 ORTHO05D009089 9.6e-99 365.2 523 55.3
Thecc.01G042000 Theobroma cacao HOM05D007242 ORTHO05D009089 9.6e-99 365.2 543 61.0
Medtr8g107230 Medicago truncatula HOM05D007242 ORTHO05D009089 2.1e-98 364.0 525 53.7
Duzib264G0124 Durio zibethinus HOM05D007242 ORTHO05D009089 4.8e-98 362.8 522 62.3
Gohir.A11G044400 Gossypium hirsutum HOM05D007242 ORTHO05D009089 1.1e-97 361.7 545 61.5
arahy.Tifrunner.gnm1.ann1.YZC3AP Arachis hypogaea HOM05D007242 ORTHO05D009089 4.0e-97 359.8 523 53.5
TPR.G15492 Trifolium pratense HOM05D007242 ORTHO05D009089 4.0e-97 359.8 527 61.5
Nitab4.5_0010783g0030 Nicotiana tabacum HOM05D007242 ORTHO05D009089 9.0e-97 358.6 522 62.5
VMungo0251G2211 Vigna mungo HOM05D007242 ORTHO05D009089 1.2e-96 358.2 523 61.4
Glyma.05G246000 Glycine max HOM05D007242 ORTHO05D009089 1.5e-96 357.8 537 59.8
Sabra05G0104300 Salix brachista HOM05D007242 ORTHO05D009089 2.0e-96 357.5 572 51.0
vmacro23494 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 2.0e-96 357.5 533 63.6
THA.LOC104819810 Tarenaya hassleriana HOM05D007242 ORTHO05D009089 2.6e-96 357.1 523 61.8
CiPaw.15G142800 Carya illinoinensis HOM05D007242 ORTHO05D009089 4.5e-96 356.3 529 61.4
CANSAT35G0651 Cannabis sativa HOM05D007242 ORTHO05D009089 2.2e-95 354.0 526 61.6
TAR381G0682 Trochodendron aralioides HOM05D007242 ORTHO05D009089 3.8e-95 353.2 541 61.2
Cc07_g05120 Coffea canephora HOM05D007242 ORTHO05D009089 1.9e-94 350.9 544 61.0
Psat4g001600 Pisum sativum HOM05D007242 ORTHO05D009089 2.5e-94 350.5 575 57.6
Eucgr.B03084 Eucalyptus grandis HOM05D007242 ORTHO05D009089 1.6e-93 347.8 519 62.8
TWI53G0783 Tripterygium wilfordii HOM05D007242 ORTHO05D009089 4.6e-93 346.3 518 62.2
HanXRQChr14g0431951 Helianthus annuus HOM05D007242 ORTHO05D009089 1.0e-92 345.1 532 60.0
Lalb_Chr05g0221691 Lupinus albus HOM05D007242 ORTHO05D009089 3.3e-91 340.1 553 58.4
DCAR_026265 Daucus carota HOM05D007242 ORTHO05D009089 1.3e-90 338.2 524 61.3
ClCG02G013250 Citrullus lanatus HOM05D007242 ORTHO05D009089 1.4e-89 334.7 529 59.0
Peaxi162Scf00075g00617 Petunia axillaris HOM05D007242 ORTHO05D009089 2.4e-89 334.0 547 59.6
Aqoxy6G01016 Aquilegia oxysepala HOM05D007242 ORTHO05D009089 3.1e-89 333.6 549 58.3
Sed0022143 Sechium edule HOM05D007242 ORTHO05D009089 2.9e-87 327.0 530 57.9
AL5G10350 Arabidopsis lyrata HOM05D007242 ORTHO05D009089 8.5e-87 325.5 569 55.0
PGR102G1679 Punica granatum HOM05D007242 ORTHO05D009089 1.9e-86 324.3 522 58.6
AT2G01390 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 7.2e-86 322.4 563 56.7
BcaC06g34194 Brassica carinata HOM05D007242 ORTHO05D009089 1.2e-85 321.6 562 54.3
CsaV3_2G017430 Cucumis sativus L. HOM05D007242 ORTHO05D009089 2.1e-85 320.9 531 58.2
C07p31760 Brassica napus HOM05D007242 ORTHO05D009089 3.6e-85 320.1 562 54.6
Thhalv10000833m.g Eutrema salsugineum HOM05D007242 ORTHO05D009089 3.6e-85 320.1 541 56.4
BolC7t43717H Brassica oleracea HOM05D007242 ORTHO05D009089 4.6e-85 319.7 562 54.6
Hund14133 Selenicereus undatus HOM05D007242 ORTHO05D009089 4.6e-85 319.7 549 58.3
Lsat_1_v5_gn_2_38041 Lactuca sativa HOM05D007242 ORTHO05D009089 1.0e-84 318.5 546 57.9
MELO3C020940.2 Cucumis melo HOM05D007242 ORTHO05D009089 3.9e-84 316.6 518 58.1
Dinv26797 Davidia involucrata HOM05D007242 ORTHO05D009089 3.9e-84 316.6 470 65.7
Sp2g12820 Schrenkiella parvula HOM05D007242 ORTHO05D009089 3.9e-84 316.6 563 54.0
Carub.0005s0035 Capsella rubella HOM05D007242 ORTHO05D009089 5.1e-84 316.2 540 55.9
BcaC06g31314 Brassica carinata HOM05D007242 ORTHO05D009089 6.7e-84 315.8 558 53.8
BraA06t27320Z Brassica rapa HOM05D007242 ORTHO05D009089 8.8e-84 315.5 535 55.5
A06p44470 Brassica napus HOM05D007242 ORTHO05D009089 1.5e-83 314.7 535 55.5
MBI16_g13145_MAGBIO Magnolia biondii HOM05D007242 ORTHO05D009089 5.7e-83 312.8 508 59.6
Aa31LG2G8550 Aethionema arabicum HOM05D007242 ORTHO05D009089 7.4e-83 312.4 543 54.9
Nn1g05103 Nelumbo nucifera HOM05D007242 ORTHO05D009089 1.8e-81 307.8 549 56.5
AUR62008019 Chenopodium quinoa HOM05D007242 ORTHO05D009089 7.4e-75 285.8 541 55.1
EL10Ac6g14891 Beta vulgaris HOM05D007242 ORTHO05D009089 4.8e-74 283.1 529 56.3
HanXRQChr07g0193491 Helianthus annuus HOM05D007242 ORTHO05D009089 3.1e-73 280.4 479 51.8
ATR0767G228 Amborella trichopoda HOM05D007242 ORTHO05D009089 8.2e-66 255.8 515 54.4
Nitab4.5_0008184g0020 Nicotiana tabacum HOM05D007242 ORTHO05D009089 3.1e-65 253.8 299 45.5
CARHR143900 Cardamine hirsuta HOM05D007242 ORTHO05D009089 3.5e-56 223.8 302 42.1
Gohir.D11G047900 Gossypium hirsutum HOM05D007242 ORTHO05D009089 1.7e-55 221.5 382 66.2
MD02G1154900 Malus domestica HOM05D007242 ORTHO05D009089 1.0e-52 212.2 394 35.8
COL.COLO4_04840 Corchorus olitorius HOM05D007242 ORTHO05D009089 1.8e-52 211.5 278 42.8
ECA246G4655 Erigeron canadensis HOM05D007242 ORTHO05D009089 2.3e-52 211.1 276 43.1
Glyma.08G053933 Glycine max HOM05D007242 ORTHO05D009089 8.8e-52 209.1 242 49.6
Os10g0358700 Oryza sativa ssp. japonica HOM05D007242 ORTHO05D009089 4.8e-50 203.4 540 41.3
Zm00001eb288630 Zea mays HOM05D007242 ORTHO05D009089 4.8e-50 203.4 540 40.9
A06p37220 Brassica napus HOM05D007242 ORTHO05D009089 4.2e-46 190.3 273 38.5
BraA06t26646Z Brassica rapa HOM05D007242 ORTHO05D009089 2.0e-43 181.4 265 38.1
vmacro22084 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 5.9e-40 169.9 274 39.4
CDE07G1297 Ceratophyllum demersum HOM05D007242 ORTHO05D009089 5.6e-38 163.3 289 74.0
COL.COLO4_22144 Corchorus olitorius HOM05D007242 ORTHO05D009089 3.6e-37 160.6 100 71.0
CARHR143890 Cardamine hirsuta HOM05D007242 ORTHO05D009089 4.0e-36 157.1 130 58.5
AUR62003202 Chenopodium quinoa HOM05D007242 ORTHO05D009089 3.2e-33 147.5 234 36.3
HPP92_006079 Vanilla planifolia HOM05D007242 ORTHO05D009089 5.0e-31 140.2 187 36.4
Glyma.08G053867 Glycine max HOM05D007242 ORTHO05D009089 2.5e-30 137.9 137 52.6
AT2G01360 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 1.3e-23 115.5 167 39.5
Lj4C132T2 Lonicera japonica HOM05D007242 ORTHO05D009089 6.8e-20 103.2 96 52.1
HanXRQChr14g0431911 Helianthus annuus HOM05D007242 ORTHO05D009089 8.3e-18 96.3 111 46.8
BcaC06g34182 Brassica carinata HOM05D007242 ORTHO05D009089 7.3e-14 83.2 108 42.6
EL10Ac4g08697 Beta vulgaris HOM05D007242 ORTHO05D009089 1.8e-12 78.6 137 32.1
BcaB08g34298 Brassica carinata HOM05D007242 ORTHO05D009089 1.5e-11 75.5 92 42.4
BcaC06g34191 Brassica carinata HOM05D007242 ORTHO05D009089 4.4e-11 73.9 114 38.6
Zm00001eb348820 Zea mays HOM05D007242 ORTHO05D009089 9.9e-11 72.8 140 34.3
SEGI_13247 Sequoiadendron giganteum HOM05D000238 ORTHO05D005437 6.4e-10 70.1 93 40.9
Atru.chr3.508 Acer truncatum HOM05D007242 ORTHO05D009089 1.1e-09 69.3 54 53.7
Ciclev10018829m.g Citrus clementina HOM05D004079 ORTHO05D005437 2.1e-08 65.1 93 37.6
DCAR_005313 Daucus carota HOM05D004079 ORTHO05D005437 2.7e-08 64.7 97 38.1
Sabra15G0091500 Salix brachista HOM05D004079 ORTHO05D005437 3.5e-08 64.3 105 38.1
Glyma.05G030900 Glycine max HOM05D004079 ORTHO05D005437 6.0e-08 63.5 93 36.6
Potri.015G066400 Populus trichocarpa HOM05D004079 ORTHO05D005437 6.0e-08 63.5 93 39.8
SGA_v2.0_scaffold56G20067 Striga asiatica HOM05D004079 ORTHO05D005437 7.8e-08 63.2 121 38.0
Mapoly0114s0020 Marchantia polymorpha HOM05D004079 ORTHO05D005437 1.0e-07 62.8 133 30.8
Atru.chr9.2336 Acer truncatum HOM05D004079 ORTHO05D005437 3.0e-07 61.2 93 34.4
Lj1g0021535 Lotus japonicus HOM05D004079 ORTHO05D005437 3.0e-07 61.2 93 35.5
TPR.G11874 Trifolium pratense HOM05D004079 ORTHO05D005437 8.7e-07 59.7 93 36.6
AagrBONN_evm.TU.Sc2ySwM_117.3400 Anthoceros agrestis HOM05D004079 ORTHO05D005437 1.1e-06 59.3 91 33.0
AagrBONN_evm.TU.Sc2ySwM_228.1022 Anthoceros agrestis HOM05D004079 ORTHO05D005437 1.1e-06 59.3 100 30.0
Os12g0638900 Oryza sativa ssp. japonica HOM05D004079 ORTHO05D005437 1.1e-06 59.3 102 35.3
BcaC08g46901 Brassica carinata HOM05D004079 ORTHO05D005437 1.9e-06 58.5 111 31.5
CSS0006147 Camellia sinensis var. sinensis HOM05D007242 ORTHO05D009089 1.9e-06 58.5 97 35.1
BcaC08g46918 Brassica carinata HOM05D004079 ORTHO05D005437 2.5e-06 58.2 152 28.3
AagrBONN_evm.TU.Sc2ySwM_344.4462 Anthoceros agrestis HOM05D004079 ORTHO05D000355 4.3e-06 57.4 103 34.0
ATR0661G551 Amborella trichopoda HOM05D004079 ORTHO05D005437 5.6e-06 57.0 95 34.7
A07p40430 Brassica napus HOM05D004079 ORTHO05D005437 5.6e-06 57.0 155 29.0
BolC6t39914H Brassica oleracea HOM05D004079 ORTHO05D005437 5.6e-06 57.0 152 28.3
BraA07t31585Z Brassica rapa HOM05D004079 ORTHO05D005437 5.6e-06 57.0 155 29.0
Nn4g23007 Nelumbo nucifera HOM05D004079 ORTHO05D005437 5.6e-06 57.0 110 31.8
ClCG07G013030 Citrullus lanatus HOM05D006749 ORTHO05D008352 7.3e-06 56.6 117 32.5
Mapoly0026s0069 Marchantia polymorpha HOM05D004079 ORTHO05D005437 7.3e-06 56.6 185 25.4
Zm00001eb033110 Zea mays HOM05D004079 ORTHO05D005437 7.3e-06 56.6 138 31.2
A06p15120 Brassica napus HOM05D004079 ORTHO05D005437 9.6e-06 56.2 104 34.6
BraA06t24627Z Brassica rapa HOM05D004079 ORTHO05D005437 9.6e-06 56.2 104 34.6
Mapoly0050s0075 Marchantia polymorpha HOM05D004079 ORTHO05D005437 9.6e-06 56.2 97 30.9


User provided reference genes

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