Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 6.2e-150 534.3 299 100.0
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 5.9e-44 182.2 162 63.0
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 1.1e-42 177.9 182 58.2
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 1.7e-38 164.1 164 55.5
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 1.4e-37 161.0 162 56.8
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 1.4e-37 161.0 169 50.9
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 3.2e-37 159.8 164 55.5
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 1.2e-36 157.9 153 59.5
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 3.5e-36 156.4 155 55.5
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 4.6e-36 156.0 185 48.1
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 1.0e-35 154.8 145 62.8
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 3.0e-35 153.3 171 49.7
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 3.9e-35 152.9 162 53.7
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 3.9e-35 152.9 160 53.1
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 3.9e-35 152.9 158 54.4
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 5.0e-35 152.5 178 49.4
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 6.6e-35 152.1 162 53.7
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 1.9e-34 150.6 178 50.0
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 1.9e-34 150.6 154 55.2
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 1.9e-34 150.6 163 50.3
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 1.9e-34 150.6 154 55.2
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 2.5e-34 150.2 154 55.8
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 5.6e-34 149.1 168 50.0
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 7.3e-34 148.7 156 51.3
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 9.5e-34 148.3 154 53.2
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 1.2e-33 147.9 169 48.5
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 1.2e-33 147.9 177 48.6
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 2.8e-33 146.7 156 53.2
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 3.6e-33 146.4 159 50.9
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 3.6e-33 146.4 168 47.0
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 4.7e-33 146.0 165 49.1
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 4.7e-33 146.0 159 52.2
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 4.7e-33 146.0 159 52.2
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 4.7e-33 146.0 176 47.7
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 1.4e-32 144.4 163 49.7
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 2.3e-32 143.7 170 50.0
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 3.1e-32 143.3 184 42.4
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 3.1e-32 143.3 159 50.9
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 3.1e-32 143.3 155 51.0
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 3.1e-32 143.3 151 53.6
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 3.1e-32 143.3 161 49.7
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 3.1e-32 143.3 161 50.9
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 4.0e-32 142.9 157 54.1
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 4.0e-32 142.9 166 48.8
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 4.0e-32 142.9 157 49.0
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 6.8e-32 142.1 160 48.1
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 8.9e-32 141.7 166 48.2
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 1.2e-31 141.4 156 51.9
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 1.5e-31 141.0 159 51.6
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 1.5e-31 141.0 154 51.3
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 2.0e-31 140.6 156 51.9
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 2.6e-31 140.2 174 46.0
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 4.4e-31 139.4 159 50.3
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 7.5e-31 138.7 166 50.6
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 2.2e-30 137.1 153 53.6
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 2.2e-30 137.1 154 48.7
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 2.2e-30 137.1 157 49.0
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 2.2e-30 137.1 159 49.7
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 2.9e-30 136.7 160 45.6
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 3.7e-30 136.3 152 51.3
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 6.4e-30 135.6 166 47.0
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 6.4e-30 135.6 117 64.1
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 8.3e-30 135.2 157 49.7
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 1.4e-29 134.4 173 43.9
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 2.4e-29 133.7 168 47.6
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.4e-29 133.7 157 52.2
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 4.1e-29 132.9 158 48.1
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 9.2e-29 131.7 163 50.9
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 3.5e-28 129.8 177 46.9
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 4.6e-28 129.4 175 42.9
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 7.8e-28 128.6 157 45.9
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 1.3e-27 127.9 162 45.7
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 3.9e-27 126.3 131 55.7
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 5.1e-27 125.9 146 50.0
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 5.1e-27 125.9 153 49.7
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 6.6e-27 125.6 159 49.1
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 8.6e-27 125.2 164 42.1
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 1.1e-26 124.8 131 53.4
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 3.3e-26 123.2 138 51.4
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 2.8e-25 120.2 156 42.3
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 2.8e-25 120.2 156 42.3
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 3.6e-25 119.8 141 46.1
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 3.6e-25 119.8 166 45.2
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 3.6e-25 119.8 161 43.5
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 6.2e-25 119.0 156 43.6
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 6.2e-25 119.0 156 42.3
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 1.1e-24 118.2 153 42.5
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 1.1e-24 118.2 158 41.1
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 1.4e-24 117.9 156 42.3
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 2.3e-24 117.1 168 45.8
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 3.1e-24 116.7 126 54.0
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 4.0e-24 116.3 156 42.9
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 4.0e-24 116.3 156 41.7
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 8.9e-24 115.2 156 42.3
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 8.9e-24 115.2 156 42.3
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 1.5e-23 114.4 156 41.0
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 1.5e-23 114.4 156 41.0
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 2.0e-23 114.0 154 40.3
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 7.5e-23 112.1 126 52.4
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 2.2e-22 110.5 159 46.5
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 2.2e-22 110.5 122 50.8
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 1.4e-21 107.8 132 50.8
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 1.9e-21 107.5 132 50.8
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 8.6e-19 98.6 164 41.5
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.2e-15 88.2 115 47.8
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 5.8e-15 85.9 123 39.8
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 1.6e-12 77.8 89 47.2
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 3.0e-11 73.6 79 51.9
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 7.3e-10 68.9 53 54.7
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 3.1e-08 63.5 55 60.0
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 7.6e-07 58.9 101 35.6


User provided reference genes

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