Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold204G41637 Striga asiatica HOM05D003174 ORTHO05D003439 1.8e-198 695.7 343 100.0
Migut.H00512 Erythranthe guttata HOM05D003174 ORTHO05D003439 2.8e-37 160.2 267 39.3
TAR623G0639 Trochodendron aralioides HOM05D003174 ORTHO05D003439 2.2e-26 124.0 161 41.0
Actinidia35877 Actinidia chinensis HOM05D003174 ORTHO05D003439 3.8e-26 123.2 157 42.7
TAR629G3457 Trochodendron aralioides HOM05D003174 ORTHO05D003439 4.9e-26 122.9 192 39.1
Dinv22692 Davidia involucrata HOM05D003174 ORTHO05D003439 1.9e-25 120.9 223 36.8
Solyc04g015710.3 Solanum lycopersicum HOM05D003174 ORTHO05D003439 2.7e-24 117.1 157 40.8
unitig_736.g22251 Utricularia gibba HOM05D003174 ORTHO05D003439 2.7e-24 117.1 215 36.3
Sopen04g007790 Solanum pennellii HOM05D003174 ORTHO05D003439 1.7e-23 114.4 154 40.9
CAN.G74.6 Capsicum annuum HOM05D003174 ORTHO05D003439 3.0e-23 113.6 155 41.3
CiPaw.02G056500 Carya illinoinensis HOM05D003174 ORTHO05D003439 3.0e-23 113.6 195 35.9
Nn2g10415 Nelumbo nucifera HOM05D003174 ORTHO05D003439 3.0e-23 113.6 242 34.3
TAR362G1036 Trochodendron aralioides HOM05D003174 ORTHO05D003439 6.6e-23 112.5 175 37.7
Cfa015779 Carpinus fangiana HOM05D003174 ORTHO05D003439 3.3e-22 110.2 235 35.3
CSS0007124 Camellia sinensis var. sinensis HOM05D003174 ORTHO05D003439 1.3e-21 108.2 157 40.1
Nitab4.5_0004701g0030 Nicotiana tabacum HOM05D003174 ORTHO05D003439 2.8e-21 107.1 170 37.6
Nitab4.5_0000847g0080 Nicotiana tabacum HOM05D003174 ORTHO05D003439 3.6e-21 106.7 169 37.3
Manes.08G078100 Manihot esculenta HOM05D003174 ORTHO05D003439 8.1e-21 105.5 158 39.9
Actinidia11253 Actinidia chinensis HOM05D003174 ORTHO05D003439 1.1e-20 105.1 145 41.4
Hma1.2p1_0324F.1_g125650 Hydrangea macrophylla HOM05D003174 ORTHO05D003439 1.1e-20 105.1 155 38.7
Hma1.2p1_3259F.1_g334646 Hydrangea macrophylla HOM05D003174 ORTHO05D003439 1.1e-20 105.1 155 38.7
Thecc.05G042400 Theobroma cacao HOM05D003174 ORTHO05D003439 1.1e-20 105.1 154 39.0
Aqoxy2G01410 Aquilegia oxysepala HOM05D003174 ORTHO05D003439 1.8e-20 104.4 184 32.1
Aqoxy4G02974 Aquilegia oxysepala HOM05D003051 ORTHO05D003932 1.8e-20 104.4 184 32.1
Gohir.A09G157600 Gossypium hirsutum HOM05D003174 ORTHO05D003439 1.8e-20 104.4 236 33.5
Gorai.006G174400 Gossypium raimondii HOM05D003174 ORTHO05D003439 1.8e-20 104.4 243 32.1
Dinv35623 Davidia involucrata HOM05D003174 ORTHO05D003439 2.4e-20 104.0 161 39.1
TWI15G0304 Tripterygium wilfordii HOM05D003174 ORTHO05D003439 2.4e-20 104.0 200 33.0
TWI15G0472 Tripterygium wilfordii HOM05D003174 ORTHO05D003439 2.4e-20 104.0 200 33.0
Haze_00715 Corylus avellana HOM05D003174 ORTHO05D003439 6.9e-20 102.4 236 35.2
GSVIVG01034205001 Vitis vinifera HOM05D003174 ORTHO05D003439 1.2e-19 101.7 175 37.1
Ciclev10021601m.g Citrus clementina HOM05D003174 ORTHO05D003439 2.0e-19 100.9 161 35.4
MBI17_g16533_MAGBIO Magnolia biondii HOM05D003174 ORTHO05D003439 2.6e-19 100.5 175 36.6
MD04G1038200 Malus domestica HOM05D003174 ORTHO05D003439 2.6e-19 100.5 186 33.9
Potri.017G036100 Populus trichocarpa HOM05D003174 ORTHO05D003439 3.4e-19 100.1 166 36.7
Nn1g09826 Nelumbo nucifera HOM05D003174 ORTHO05D003439 4.4e-19 99.8 187 34.2
arahy.Tifrunner.gnm1.ann1.6UZP51 Arachis hypogaea HOM05D003174 ORTHO05D003439 5.8e-19 99.4 228 30.3
Atru.chr3.1551 Acer truncatum HOM05D003174 ORTHO05D003439 9.9e-19 98.6 223 31.4
Duzib106G0893 Durio zibethinus HOM05D003174 ORTHO05D003439 9.9e-19 98.6 147 37.4
PSO339G3795 Papaver somniferum HOM05D003174 ORTHO05D003439 1.7e-18 97.8 167 35.3
Lj1g0011268 Lotus japonicus HOM05D003174 ORTHO05D003439 2.2e-18 97.4 201 32.3
Cfa017411 Carpinus fangiana HOM05D003174 ORTHO05D003439 2.9e-18 97.1 162 36.4
Gorai.004G087600 Gossypium raimondii HOM05D003174 ORTHO05D003439 2.9e-18 97.1 177 36.2
Gohir.A08G074200 Gossypium hirsutum HOM05D003174 ORTHO05D003439 3.8e-18 96.7 192 34.9
Gohir.D08G083400 Gossypium hirsutum HOM05D003174 ORTHO05D003439 3.8e-18 96.7 177 36.2
PSO384G3329 Papaver somniferum HOM05D035235 ORTHO05D003439 4.9e-18 96.3 167 35.3
GSVIVG01013578001 Vitis vinifera HOM05D003174 ORTHO05D003439 6.4e-18 95.9 157 35.0
arahy.Tifrunner.gnm1.ann1.IJS1VI Arachis hypogaea HOM05D003174 ORTHO05D003439 8.4e-18 95.5 190 31.6
Lalb_Chr06g0170971 Lupinus albus HOM05D003174 ORTHO05D003439 8.4e-18 95.5 161 36.0
PSO541G3184 Papaver somniferum HOM05D003174 ORTHO05D003439 8.4e-18 95.5 236 31.4
arahy.Tifrunner.gnm1.ann1.Y7W1NJ Arachis hypogaea HOM05D003174 ORTHO05D003439 1.1e-17 95.1 190 31.6
QL10p045460 Quercus lobata HOM05D003174 ORTHO05D003439 1.1e-17 95.1 165 34.5
THA.LOC104802302 Tarenaya hassleriana HOM05D003174 ORTHO05D003439 1.1e-17 95.1 165 35.8
Rhsim05G0189700 Rhododendron simsii HOM05D003174 ORTHO05D003439 2.4e-17 94.0 161 35.4
Duzib093G0200 Durio zibethinus HOM05D003174 ORTHO05D003439 3.2e-17 93.6 117 47.0
Potri.004G077400 Populus trichocarpa HOM05D003174 ORTHO05D003439 3.2e-17 93.6 172 34.3
Sed0000072 Sechium edule HOM05D003174 ORTHO05D003439 3.2e-17 93.6 160 35.0
Glyma.13G131100 Glycine max HOM05D003174 ORTHO05D003439 4.2e-17 93.2 195 31.3
Sabra04G0051000 Salix brachista HOM05D003174 ORTHO05D003439 5.4e-17 92.8 183 32.8
Potri.007G124300 Populus trichocarpa HOM05D003174 ORTHO05D003439 7.1e-17 92.4 166 34.3
arahy.Tifrunner.gnm1.ann1.FD13B1 Arachis hypogaea HOM05D003174 ORTHO05D003439 9.3e-17 92.0 190 31.1
MELO3C017697.2 Cucumis melo HOM05D003174 ORTHO05D003439 9.3e-17 92.0 174 32.2
TWI53G0288 Tripterygium wilfordii HOM05D003174 ORTHO05D003439 9.3e-17 92.0 145 36.6
Haze_00723 Corylus avellana HOM05D000268 ORTHO05D000261 1.2e-16 91.7 196 34.2
HanXRQChr13g0395041 Helianthus annuus HOM05D003174 ORTHO05D003439 1.2e-16 91.7 152 36.2
QL07p031124 Quercus lobata HOM05D003174 ORTHO05D003439 1.2e-16 91.7 151 34.4
QL07p047847 Quercus lobata HOM05D003174 ORTHO05D003439 1.2e-16 91.7 151 34.4
Haze_20757 Corylus avellana HOM05D003174 ORTHO05D003439 1.6e-16 91.3 149 36.9
Eucgr.I00627 Eucalyptus grandis HOM05D003174 ORTHO05D003439 1.6e-16 91.3 194 30.9
Thecc.05G002600 Theobroma cacao HOM05D003174 ORTHO05D003439 2.1e-16 90.9 113 44.2
VMungo1127G0815 Vigna mungo HOM05D003174 ORTHO05D003439 2.1e-16 90.9 196 31.1
BcaC09g49501 Brassica carinata HOM05D003174 ORTHO05D003439 2.7e-16 90.5 197 32.5
Peaxi162Scf00066g01134 Petunia axillaris HOM05D003174 ORTHO05D003439 2.7e-16 90.5 155 34.2
MELO3C003115.2 Cucumis melo HOM05D003174 ORTHO05D003439 3.5e-16 90.1 184 35.3
PSO532G0060 Papaver somniferum HOM05D003174 ORTHO05D003439 3.5e-16 90.1 169 33.7
BolC1t03544H Brassica oleracea HOM05D003174 ORTHO05D003439 4.6e-16 89.7 197 32.5
Phvul.007G157300 Phaseolus vulgaris HOM05D003174 ORTHO05D003439 4.6e-16 89.7 173 34.7
PGR004G2807 Punica granatum HOM05D003174 ORTHO05D003439 6.0e-16 89.4 158 34.2
COL.COLO4_20117 Corchorus olitorius HOM05D003174 ORTHO05D003439 7.9e-16 89.0 192 30.7
ECA233G3488 Erigeron canadensis HOM05D003174 ORTHO05D003439 7.9e-16 89.0 157 36.3
PSO675G7155 Papaver somniferum HOM05D003174 ORTHO05D003439 7.9e-16 89.0 184 33.2
PGSC0003DMG400027274 Solanum tuberosum HOM05D003174 ORTHO05D003439 7.9e-16 89.0 125 41.6
Sabra07G0100600 Salix brachista HOM05D003174 ORTHO05D003439 1.3e-15 88.2 165 34.5
Cpa.g.sc260.5 Carica papaya HOM05D003174 ORTHO05D003439 2.3e-15 87.4 152 36.2
MSTRG.924 Avicennia marina HOM05D003174 ORTHO05D003439 3.0e-15 87.0 161 31.7
BcaB04g20191 Brassica carinata HOM05D003174 ORTHO05D003439 3.0e-15 87.0 226 30.5
Cc06_g06750 Coffea canephora HOM05D003174 ORTHO05D003439 3.0e-15 87.0 151 35.1
CsaV3_4G003560 Cucumis sativus L. HOM05D003174 ORTHO05D003439 3.0e-15 87.0 175 30.3
Sp2g05410 Schrenkiella parvula HOM05D001877 ORTHO05D001886 3.0e-15 87.0 159 34.0
Aqoxy4G02973 Aquilegia oxysepala HOM05D003174 ORTHO05D003439 3.9e-15 86.7 157 35.0
Lj3A970G57 Lonicera japonica HOM05D003174 ORTHO05D003439 3.9e-15 86.7 151 33.1
MD04G1124900 Malus domestica HOM05D003174 ORTHO05D003439 3.9e-15 86.7 173 34.1
CAN.G97.37 Capsicum annuum HOM05D003174 ORTHO05D003439 6.6e-15 85.9 207 30.9
AL2G18170 Arabidopsis lyrata HOM05D003174 ORTHO05D003439 8.7e-15 85.5 130 38.5
Prupe.6G252000 Prunus persica HOM05D003174 ORTHO05D003439 8.7e-15 85.5 170 34.1
BraA01t02958Z Brassica rapa HOM05D001877 ORTHO05D001886 1.1e-14 85.1 191 32.5
Medtr1g069015 Medicago truncatula HOM05D003174 ORTHO05D003439 1.1e-14 85.1 189 28.6
Peaxi162Scf00165g01840 Petunia axillaris HOM05D003174 ORTHO05D003439 1.1e-14 85.1 148 34.5
THA.LOC104816287 Tarenaya hassleriana HOM05D003174 ORTHO05D003439 1.1e-14 85.1 244 30.3
Manes.04G049000 Manihot esculenta HOM05D003174 ORTHO05D003439 1.5e-14 84.7 187 31.0
FvH4_4g11320 Fragaria vesca HOM05D003174 ORTHO05D003439 2.5e-14 84.0 179 31.3
Medtr7g039520 Medicago truncatula HOM05D003174 ORTHO05D003439 2.5e-14 84.0 221 28.5
CANSAT01G0457 Cannabis sativa HOM05D003174 ORTHO05D003439 3.3e-14 83.6 192 29.7
HanXRQChr13g0395031 Helianthus annuus HOM05D003174 ORTHO05D003439 3.3e-14 83.6 168 32.7
Atru.chr3.120 Acer truncatum HOM05D003174 ORTHO05D003439 4.3e-14 83.2 122 36.9
Medtr5g040080 Medicago truncatula HOM05D003174 ORTHO05D003439 4.3e-14 83.2 199 29.1
CsaV3_4G024810 Cucumis sativus L. HOM05D003174 ORTHO05D003439 5.6e-14 82.8 175 33.1
Gohir.D09G152900 Gossypium hirsutum HOM05D003174 ORTHO05D003439 5.6e-14 82.8 71 53.5
PGR083G2046 Punica granatum HOM05D003174 ORTHO05D003439 5.6e-14 82.8 212 29.7
Sed0019898 Sechium edule HOM05D003174 ORTHO05D003439 5.6e-14 82.8 246 27.2
PGSC0003DMG400008848 Solanum tuberosum HOM05D003174 ORTHO05D003439 9.6e-14 82.0 146 34.2
Migut.C00381 Erythranthe guttata HOM05D003174 ORTHO05D003439 1.3e-13 81.6 138 31.9
CARHR210840 Cardamine hirsuta HOM05D003174 ORTHO05D003439 1.6e-13 81.3 156 32.1
SGA_v2.0_scaffold6G03139 Striga asiatica HOM05D003174 ORTHO05D003439 1.6e-13 81.3 174 31.0
MSTRG.13246 Avicennia marina HOM05D003174 ORTHO05D003439 2.1e-13 80.9 97 49.5
Ciclev10011079m.g Citrus clementina HOM05D003174 ORTHO05D003439 2.8e-13 80.5 145 31.0
RcHm_v2.0_Chr4g0407561 Rosa chinensis HOM05D003174 ORTHO05D003439 2.8e-13 80.5 178 32.6
Solyc09g010550.4 Solanum lycopersicum HOM05D003174 ORTHO05D003439 3.6e-13 80.1 175 32.6
AT1G58210 Arabidopsis thaliana HOM05D003174 ORTHO05D003439 4.8e-13 79.7 140 37.1
Sopen09g005270 Solanum pennellii HOM05D003174 ORTHO05D003439 4.8e-13 79.7 175 33.7
Lsat_1_v5_gn_2_36541 Lactuca sativa HOM05D003174 ORTHO05D003439 6.2e-13 79.3 156 32.7
CDE07G1712 Ceratophyllum demersum HOM05D003174 ORTHO05D003439 1.1e-12 78.6 140 32.9
Eucgr.A00550 Eucalyptus grandis HOM05D003174 ORTHO05D003439 1.1e-12 78.6 163 32.5
Thhalv10023956m.g Eutrema salsugineum HOM05D001877 ORTHO05D001886 1.4e-12 78.2 157 33.1
Aa31LG1G22280 Aethionema arabicum HOM05D003174 ORTHO05D003439 1.8e-12 77.8 142 30.3
CARHR053810 Cardamine hirsuta HOM05D003174 ORTHO05D003439 1.8e-12 77.8 213 31.0
HanXRQChr08g0226171 Helianthus annuus HOM05D003174 ORTHO05D003439 1.8e-12 77.8 97 46.4
SHI29135 Sapria himalayana HOM05D003174 ORTHO05D003439 1.8e-12 77.8 90 41.1
Sp6g39990 Schrenkiella parvula HOM05D003174 ORTHO05D003439 1.8e-12 77.8 143 32.2
EL10Ac4g08337 Beta vulgaris HOM05D003174 ORTHO05D003439 2.4e-12 77.4 70 55.7
Ca_04778_v3 Cicer arietinum L. HOM05D003174 ORTHO05D003439 3.1e-12 77.0 203 27.1
Thhalv10015290m.g Eutrema salsugineum HOM05D003174 ORTHO05D003439 5.3e-12 76.3 180 27.8
FAN07G2661 Fragaria x ananassa HOM05D003174 ORTHO05D003439 5.3e-12 76.3 105 41.9
Nitab4.5_0004091g0070 Nicotiana tabacum HOM05D003174 ORTHO05D003439 5.3e-12 76.3 243 28.0
AUR62043191 Chenopodium quinoa HOM05D003174 ORTHO05D003439 9.0e-12 75.5 188 31.9
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 9.0e-12 75.5 185 31.9
Aa31LG2G10940 Aethionema arabicum HOM05D003174 ORTHO05D003439 1.2e-11 75.1 149 32.9
Lj3g0014619 Lotus japonicus HOM05D003174 ORTHO05D003439 1.5e-11 74.7 182 31.9
Nitab4.5_0000761g0050 Nicotiana tabacum HOM05D003174 ORTHO05D003439 1.5e-11 74.7 172 30.8
BcaC03g13058 Brassica carinata HOM05D003174 ORTHO05D003439 2.0e-11 74.3 143 30.8
CANSAT21G1894 Cannabis sativa HOM05D003174 ORTHO05D003439 2.0e-11 74.3 152 30.3
FAN17G0897 Fragaria x ananassa HOM05D003174 ORTHO05D003439 2.0e-11 74.3 105 41.0
Psat2g183360 Pisum sativum HOM05D003174 ORTHO05D003439 2.0e-11 74.3 159 28.3
BraA02t04720Z Brassica rapa HOM05D003174 ORTHO05D003439 2.6e-11 73.9 157 29.3
HPP92_001613 Vanilla planifolia HOM05D003174 ORTHO05D003439 2.6e-11 73.9 158 29.7
TPR.G37089 Trifolium pratense HOM05D003174 ORTHO05D003439 3.4e-11 73.6 165 27.3
EL10Ac4g08332 Beta vulgaris HOM05D003174 ORTHO05D003439 4.5e-11 73.2 70 52.9
COL.COLO4_14835 Corchorus olitorius HOM05D003174 ORTHO05D003439 4.5e-11 73.2 62 54.8
C02p00500 Brassica napus HOM05D003174 ORTHO05D003439 5.8e-11 72.8 143 30.8
Carub.0006s0132 Capsella rubella HOM05D003174 ORTHO05D003439 7.6e-11 72.4 228 26.8
Glyma.09G003000 Glycine max HOM05D003174 ORTHO05D003439 7.6e-11 72.4 158 29.7
Rhsim02G0075700 Rhododendron simsii HOM05D003174 ORTHO05D003439 7.6e-11 72.4 200 28.0
AT5G02520 Arabidopsis thaliana HOM05D003174 ORTHO05D003439 1.3e-10 71.6 242 28.5
Psat0s2930g0040 Pisum sativum HOM05D003174 ORTHO05D003439 1.3e-10 71.6 154 27.3
AL6G11780 Arabidopsis lyrata HOM05D003174 ORTHO05D003439 1.7e-10 71.2 139 32.4
BolC2t06049H Brassica oleracea HOM05D003174 ORTHO05D003439 1.7e-10 71.2 143 30.1
Cc06_g02840 Coffea canephora HOM05D003174 ORTHO05D003439 2.9e-10 70.5 143 29.4
DCAR_025649 Daucus carota HOM05D003174 ORTHO05D003439 2.9e-10 70.5 125 33.6
Glyma.10G043400 Glycine max HOM05D003174 ORTHO05D003439 2.9e-10 70.5 84 42.9
TPR.G21831 Trifolium pratense HOM05D000319 ORTHO05D003439 3.8e-10 70.1 115 30.4
Ca_27793_v3 Cicer arietinum L. HOM05D003174 ORTHO05D003439 1.1e-09 68.6 141 29.8
RcHm_v2.0_Chr3g0467041 Rosa chinensis HOM05D003174 ORTHO05D003439 1.4e-09 68.2 212 27.4
TPR.G29857 Trifolium pratense HOM05D003174 ORTHO05D003439 1.4e-09 68.2 137 26.3
vmacro08698 Vaccinium macrocarpon HOM05D003174 ORTHO05D003439 1.9e-09 67.8 141 34.0
arahy.Tifrunner.gnm1.ann1.T81LQ1 Arachis hypogaea HOM05D003174 ORTHO05D003439 3.2e-09 67.0 81 44.4
arahy.Tifrunner.gnm1.ann1.D9JBU2 Arachis hypogaea HOM05D003174 ORTHO05D003439 4.2e-09 66.6 130 34.6
ECA233G2094 Erigeron canadensis HOM05D003174 ORTHO05D003439 4.2e-09 66.6 100 42.0
Medtr1g069020 Medicago truncatula HOM05D003174 ORTHO05D003439 4.2e-09 66.6 77 40.3
SHI12657 Sapria himalayana HOM05D003174 ORTHO05D003439 5.4e-09 66.2 82 41.5
arahy.Tifrunner.gnm1.ann1.7EM6TL Arachis hypogaea HOM05D003174 ORTHO05D003439 7.1e-09 65.9 64 48.4
BcaB05g21888 Brassica carinata HOM05D003174 ORTHO05D003439 9.3e-09 65.5 136 30.1
FAN09G4813 Fragaria x ananassa HOM05D003174 ORTHO05D003439 1.2e-08 65.1 139 28.8
Phvul.011G086100 Phaseolus vulgaris HOM05D003174 ORTHO05D003439 1.2e-08 65.1 109 34.9
FvH4_6g25230 Fragaria vesca HOM05D003174 ORTHO05D003439 1.6e-08 64.7 139 28.8
AUR62019568 Chenopodium quinoa HOM05D003174 ORTHO05D003439 3.5e-08 63.5 75 45.3
Sc02g0004510 Simmondsia chinensis HOM05D003174 ORTHO05D003439 3.5e-08 63.5 173 27.7
arahy.Tifrunner.gnm1.ann1.T4VAVP Arachis hypogaea HOM05D003174 ORTHO05D003439 6.0e-08 62.8 82 42.7
Os04g0347900 Oryza sativa ssp. japonica HOM05D003174 ORTHO05D003439 1.0e-07 62.0 58 48.3
FAN05G5174 Fragaria x ananassa HOM05D003174 ORTHO05D003439 1.8e-07 61.2 139 28.1
FAN14G5980 Fragaria x ananassa HOM05D003174 ORTHO05D003439 6.7e-07 59.3 194 26.8
FAN02G1934 Fragaria x ananassa HOM05D003174 ORTHO05D003439 1.1e-06 58.5 212 26.4
FAN05G2164 Fragaria x ananassa HOM05D003174 ORTHO05D003439 1.1e-06 58.5 155 29.0
FAN09G4560 Fragaria x ananassa HOM05D003174 ORTHO05D003439 1.1e-06 58.5 117 34.2
ATR0019G037 Amborella trichopoda HOM05D003174 ORTHO05D003439 1.5e-06 58.2 160 29.4
TPR.G23103 Trifolium pratense HOM05D003174 ORTHO05D003439 3.3e-06 57.0 121 25.6


User provided reference genes

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