Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold203G41556 Striga asiatica HOM05D011630 ORTHO05D014269 1.2e-74 283.1 144 100.0
SGA_v2.0_scaffold2G00884 Striga asiatica HOM05D011630 ORTHO05D014269 3.7e-68 261.5 139 95.7
SGA_v2.0_scaffold53G19282 Striga asiatica HOM05D011630 ORTHO05D014269 3.7e-68 261.5 139 95.7
SGA_v2.0_scaffold354G49733 Striga asiatica HOM05D011630 ORTHO05D014269 8.3e-68 260.4 139 95.0
SGA_v2.0_scaffold30G12367 Striga asiatica HOM05D011630 ORTHO05D014269 5.4e-67 257.7 139 93.5
SGA_v2.0_scaffold217G42455 Striga asiatica HOM05D011630 ORTHO05D014269 4.5e-66 254.6 139 92.8
SGA_v2.0_scaffold263G45986 Striga asiatica HOM05D011630 ORTHO05D014269 4.5e-66 254.6 139 92.8
SGA_v2.0_scaffold621G53225 Striga asiatica HOM05D011630 ORTHO05D014269 1.1e-59 233.4 125 94.4
SGA_v2.0_scaffold22G09678 Striga asiatica HOM05D011630 ORTHO05D014269 2.4e-59 232.3 126 92.1
SGA_v2.0_scaffold366G50026 Striga asiatica HOM05D011630 ORTHO05D014269 8.9e-54 213.8 111 93.7
SGA_v2.0_scaffold30G12563 Striga asiatica HOM05D011630 ORTHO05D002863 7.6e-21 104.4 69 79.7
SGA_v2.0_scaffold38G14998 Striga asiatica HOM05D011630 ORTHO05D014269 9.6e-16 87.4 98 50.0
SGA_v2.0_scaffold211G42175 Striga asiatica HOM05D011630 ORTHO05D014269 5.8e-13 78.2 63 54.0
SGA_v2.0_scaffold199G41207 Striga asiatica HOM05D011630 ORTHO05D014269 7.6e-13 77.8 66 54.5
SGA_v2.0_scaffold3G01575 Striga asiatica HOM05D011630 ORTHO05D014269 9.3e-11 70.9 103 41.7
Lj3P1024T39 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-10 69.3 119 35.3
SGA_v2.0_scaffold150G36678 Striga asiatica HOM05D011630 ORTHO05D014269 7.9e-10 67.8 66 48.5
SGA_v2.0_scaffold14G06948 Striga asiatica HOM05D001383 ORTHO05D000309 3.9e-09 65.5 45 55.6
SGA_v2.0_scaffold12G06209 Striga asiatica HOM05D000403 ORTHO05D000350 9.6e-08 60.8 52 57.7
AL8G10620 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.3e-07 60.5 164 31.1
CAN.G1459.18 Capsicum annuum HOM05D009408 ORTHO05D000309 1.3e-07 60.5 61 49.2
Solyc10g055427.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 1.3e-07 60.5 119 32.8
Solyc09g072730.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 1.6e-07 60.1 119 32.8
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 2.1e-07 59.7 60 43.3
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 3.7e-07 58.9 60 43.3
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 3.7e-07 58.9 60 43.3
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 3.7e-07 58.9 66 39.4
SGA_v2.0_scaffold100G29657 Striga asiatica HOM05D001383 ORTHO05D000309 3.7e-07 58.9 54 48.1
SGA_v2.0_scaffold8G04646 Striga asiatica HOM05D000134 ORTHO05D000168 3.7e-07 58.9 52 55.8
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 4.8e-07 58.5 59 44.1
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 6.2e-07 58.2 59 44.1
SGA_v2.0_scaffold364G49972 Striga asiatica HOM05D001383 ORTHO05D000309 6.2e-07 58.2 41 53.7
SGA_v2.0_scaffold45G16985 Striga asiatica HOM05D001383 ORTHO05D000309 6.2e-07 58.2 41 53.7
SGA_v2.0_scaffold670G53420 Striga asiatica HOM05D001383 ORTHO05D000309 6.2e-07 58.2 54 48.1
AL1G58110 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 8.1e-07 57.8 165 30.9
AL5G19890 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 8.1e-07 57.8 164 29.9
AL5G20070 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 8.1e-07 57.8 164 29.9
CANSAT54G0644 Cannabis sativa HOM05D015495 ORTHO05D024749 8.1e-07 57.8 94 34.0
DCAR_006044 Daucus carota HOM05D001383 ORTHO05D000309 8.1e-07 57.8 112 32.1
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 8.1e-07 57.8 60 43.3
PGSC0003DMG400008721 Solanum tuberosum HOM05D009408 ORTHO05D000309 8.1e-07 57.8 136 35.3
SGA_v2.0_scaffold55G19817 Striga asiatica HOM05D001383 ORTHO05D000309 8.1e-07 57.8 45 48.9
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-06 57.4 144 30.6
Lj2P1128T27 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-06 57.0 60 41.7
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 1.4e-06 57.0 45 48.9
Solyc10g080784.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.4e-06 57.0 104 36.5
Solyc12g062733.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 1.4e-06 57.0 117 32.5
AL6G41320 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.8e-06 56.6 156 29.5
DCAR_001866 Daucus carota HOM05D001383 ORTHO05D000309 1.8e-06 56.6 150 29.3
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 1.8e-06 56.6 45 48.9
SGA_v2.0_scaffold267G46184 Striga asiatica HOM05D035478 ORTHO05D000309 1.8e-06 56.6 93 32.3
AL9U10530 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 2.4e-06 56.2 164 29.3
Lj3P238T23 Lonicera japonica HOM05D008126 ORTHO05D000309 2.4e-06 56.2 59 42.4
SGA_v2.0_scaffold59G20773 Striga asiatica HOM05D001383 ORTHO05D000309 2.4e-06 56.2 45 46.7
AL3G46750 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 3.1e-06 55.8 164 29.3
CAN.G1014.58 Capsicum annuum HOM05D009408 ORTHO05D000309 3.1e-06 55.8 59 47.5
COL.COLO4_10433 Corchorus olitorius HOM05D023691 ORTHO05D000309 3.1e-06 55.8 57 40.4
Dinv14680 Davidia involucrata HOM05D008126 ORTHO05D000309 3.1e-06 55.8 63 41.3
Nitab4.5_0000319g0130 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.1e-06 55.8 44 50.0
vmacro00766 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 3.1e-06 55.8 48 50.0
C09p37560 Brassica napus HOM05D008073 ORTHO05D000309 4.0e-06 55.5 106 32.1
CAN.G1343.17 Capsicum annuum HOM05D009408 ORTHO05D000309 4.0e-06 55.5 48 50.0
Lj1P904T2 Lonicera japonica HOM05D008126 ORTHO05D000309 4.0e-06 55.5 139 29.5
Lj4P291T36 Lonicera japonica HOM05D008126 ORTHO05D000309 4.0e-06 55.5 141 29.8
Peaxi162Scf00562g00008 Petunia axillaris HOM05D004040 ORTHO05D000309 4.0e-06 55.5 41 53.7
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 4.0e-06 55.5 41 53.7
CAN.G1801.2 Capsicum annuum HOM05D009408 ORTHO05D000309 5.3e-06 55.1 48 52.1
CiPaw.13G125800 Carya illinoinensis HOM05D009850 ORTHO05D011981 5.3e-06 55.1 67 35.8
AUR62015041 Chenopodium quinoa HOM05D005931 ORTHO05D005553 5.3e-06 55.1 105 29.5
Dinv05615 Davidia involucrata HOM05D001383 ORTHO05D000309 5.3e-06 55.1 43 55.8
Dinv22727 Davidia involucrata HOM05D008126 ORTHO05D000309 5.3e-06 55.1 41 51.2
Lj2P759T3 Lonicera japonica HOM05D008126 ORTHO05D000309 5.3e-06 55.1 60 41.7
PGSC0003DMG400014126 Solanum tuberosum HOM05D009408 ORTHO05D000309 5.3e-06 55.1 103 37.9
SGA_v2.0_scaffold333G49004 Striga asiatica HOM05D001383 ORTHO05D000309 5.3e-06 55.1 61 45.9
Lj6P779T66 Lonicera japonica HOM05D008126 ORTHO05D000309 6.9e-06 54.7 119 32.8
PGSC0003DMG400029733 Solanum tuberosum HOM05D009408 ORTHO05D000309 6.9e-06 54.7 136 34.6
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 9.0e-06 54.3 139 29.5
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 9.0e-06 54.3 45 48.9
SGA_v2.0_scaffold4G02359 Striga asiatica HOM05D001383 ORTHO05D000309 9.0e-06 54.3 90 32.2


User provided reference genes

Program Settings