Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold202G41480 Striga asiatica HOM05D007158 ORTHO05D007424 4.6e-179 631.3 373 100.0
Migut.H00250 Erythranthe guttata HOM05D007158 ORTHO05D007424 3.7e-43 179.9 264 50.4
Oeu047435.1 Olea europaea HOM05D007158 ORTHO05D007424 7.7e-41 172.2 275 54.9
MSTRG.2781 Avicennia marina HOM05D007158 ORTHO05D007424 5.5e-39 166.0 264 54.5
ECA232G0903 Erigeron canadensis HOM05D007158 ORTHO05D007424 7.2e-31 139.0 216 55.1
Lj4A182G65 Lonicera japonica HOM05D007158 ORTHO05D007424 1.6e-30 137.9 147 55.8
CsaV3_4G010370 Cucumis sativus L. HOM05D007158 ORTHO05D007424 1.0e-29 135.2 213 45.1
CAN.G225.14 Capsicum annuum HOM05D007158 ORTHO05D007424 3.9e-29 133.3 275 48.7
HanXRQChr09g0262471 Helianthus annuus HOM05D007158 ORTHO05D007424 3.9e-29 133.3 159 54.7
Peaxi162Scf00343g00058 Petunia axillaris HOM05D007158 ORTHO05D007424 3.9e-29 133.3 264 50.8
ClCG07G016450 Citrullus lanatus HOM05D007158 ORTHO05D007424 8.8e-29 132.1 279 40.1
Cfa007880 Carpinus fangiana HOM05D007158 ORTHO05D007424 2.6e-28 130.6 267 44.6
Hma1.2p1_0500F.1_g167110 Hydrangea macrophylla HOM05D007158 ORTHO05D007424 3.3e-28 130.2 269 46.1
MELO3C010379.2 Cucumis melo HOM05D007158 ORTHO05D007424 4.4e-28 129.8 259 39.0
DCAR_025891 Daucus carota HOM05D007158 ORTHO05D007424 5.7e-28 129.4 219 46.1
Dinv14854 Davidia involucrata HOM05D007158 ORTHO05D007424 5.7e-28 129.4 203 54.7
Nn4g24036 Nelumbo nucifera HOM05D007158 ORTHO05D007424 7.4e-28 129.0 147 53.1
QL02p049322 Quercus lobata HOM05D007158 ORTHO05D007424 7.4e-28 129.0 269 45.7
Ciclev10012598m.g Citrus clementina HOM05D007158 ORTHO05D007424 9.7e-28 128.6 258 38.8
Lsat_1_v5_gn_4_156301 Lactuca sativa HOM05D007158 ORTHO05D007424 9.7e-28 128.6 254 47.6
CANSAT78G1746 Cannabis sativa HOM05D007158 ORTHO05D007424 1.7e-27 127.9 195 52.8
Solyc02g063280.4 Solanum lycopersicum HOM05D007158 ORTHO05D007424 1.7e-27 127.9 263 46.4
Sopen02g014350 Solanum pennellii HOM05D007158 ORTHO05D007424 2.8e-27 127.1 263 47.5
Nitab4.5_0000036g0590 Nicotiana tabacum HOM05D007158 ORTHO05D007424 3.7e-27 126.7 233 48.9
PGSC0003DMG400010413 Solanum tuberosum HOM05D007158 ORTHO05D007424 6.3e-27 125.9 263 44.9
MD09G1258200 Malus domestica HOM05D007158 ORTHO05D007424 8.2e-27 125.6 244 49.2
Thecc.04G126100 Theobroma cacao HOM05D007158 ORTHO05D007424 1.4e-26 124.8 264 47.3
Cc07_g08430 Coffea canephora HOM05D007158 ORTHO05D007424 1.8e-26 124.4 257 45.9
COL.COLO4_03615 Corchorus olitorius HOM05D007158 ORTHO05D007424 1.8e-26 124.4 140 53.6
Nitab4.5_0002644g0050 Nicotiana tabacum HOM05D007158 ORTHO05D007424 1.8e-26 124.4 264 50.4
Sabra17G0103400 Salix brachista HOM05D007158 ORTHO05D007424 1.8e-26 124.4 206 48.1
PGR004G0702 Punica granatum HOM05D007158 ORTHO05D007424 3.1e-26 123.6 269 38.7
Prupe.3G150100 Prunus persica HOM05D007158 ORTHO05D007424 4.1e-26 123.2 261 44.8
Potri.017G121000 Populus trichocarpa HOM05D007158 ORTHO05D007424 7.0e-26 122.5 259 43.2
Rhsim08G0084200 Rhododendron simsii HOM05D007158 ORTHO05D007424 9.1e-26 122.1 207 46.4
TAR374G0148 Trochodendron aralioides HOM05D007158 ORTHO05D007424 9.1e-26 122.1 253 52.2
Glyma.02G090200 Glycine max HOM05D007158 ORTHO05D007424 2.0e-25 120.9 229 41.5
Glyma.18G293000 Glycine max HOM05D007158 ORTHO05D007424 4.5e-25 119.8 207 50.2
Cpa.g.sc170.15 Carica papaya HOM05D007158 ORTHO05D007424 7.7e-25 119.0 257 45.5
Dinv33973 Davidia involucrata HOM05D007158 ORTHO05D007424 1.0e-24 118.6 280 43.6
Duzib133G0688 Durio zibethinus HOM05D007158 ORTHO05D007424 1.0e-24 118.6 233 50.2
TAR629G2388 Trochodendron aralioides HOM05D007158 ORTHO05D007424 1.0e-24 118.6 272 46.3
Phvul.008G009100 Phaseolus vulgaris HOM05D007158 ORTHO05D007424 2.9e-24 117.1 258 46.5
Duzib138G0519 Durio zibethinus HOM05D007158 ORTHO05D007424 5.0e-24 116.3 261 46.7
Gohir.D11G167600 Gossypium hirsutum HOM05D007158 ORTHO05D007424 5.0e-24 116.3 264 46.2
Gorai.007G178700 Gossypium raimondii HOM05D007158 ORTHO05D007424 6.5e-24 115.9 264 47.0
Actinidia17647 Actinidia chinensis HOM05D007158 ORTHO05D007424 3.2e-23 113.6 199 43.2
ATR0743G078 Amborella trichopoda HOM05D007158 ORTHO05D007424 4.2e-23 113.2 138 52.2
Lalb_Chr10g0091481 Lupinus albus HOM05D007158 ORTHO05D007424 5.5e-23 112.8 268 35.1
RcHm_v2.0_Chr1g0332591 Rosa chinensis HOM05D007158 ORTHO05D007424 5.5e-23 112.8 257 42.0
Gohir.A11G161300 Gossypium hirsutum HOM05D007158 ORTHO05D007424 1.2e-22 111.7 266 44.0
Aqoxy3G00164 Aquilegia oxysepala HOM05D007158 ORTHO05D007424 2.1e-22 110.9 137 51.1
Lj1g0013464 Lotus japonicus HOM05D007158 ORTHO05D007424 3.6e-22 110.2 214 44.9
VMungo1383G1080 Vigna mungo HOM05D007158 ORTHO05D007424 4.7e-22 109.8 220 42.7
Hund13698 Selenicereus undatus HOM05D007158 ORTHO05D007424 1.0e-21 108.6 199 39.7
CDE04G0479 Ceratophyllum demersum HOM05D007158 ORTHO05D007424 1.4e-21 108.2 265 35.5
Medtr7g082850 Medicago truncatula HOM05D007158 ORTHO05D007424 1.4e-21 108.2 228 42.1
TWI74G0884 Tripterygium wilfordii HOM05D007158 ORTHO05D007424 1.4e-21 108.2 133 50.4
Ah.10g037870 Amaranthus hybridus HOM05D007158 ORTHO05D007424 1.8e-21 107.8 199 41.7
CDE06G2846 Ceratophyllum demersum HOM05D007158 ORTHO05D007424 3.0e-21 107.1 164 44.5
PSO339G0418 Papaver somniferum HOM05D007158 ORTHO05D007424 5.2e-21 106.3 149 47.0
Atru.chr1.1578 Acer truncatum HOM05D007158 ORTHO05D007424 6.7e-21 105.9 215 42.3
Manes.01G113800 Manihot esculenta HOM05D007158 ORTHO05D007424 1.2e-20 105.1 209 45.9
Zm00001eb300940 Zea mays HOM05D007158 ORTHO05D007424 1.2e-20 105.1 142 45.8
Sc10g0001000 Simmondsia chinensis HOM05D007158 ORTHO05D007424 3.3e-20 103.6 147 46.3
Sed0005493 Sechium edule HOM05D007158 ORTHO05D007424 7.5e-20 102.4 173 40.5
Sabra17G0100100 Salix brachista HOM05D007158 ORTHO05D007424 9.7e-20 102.1 196 43.9
FvH4_7g05720 Fragaria vesca HOM05D007158 ORTHO05D007424 1.3e-19 101.7 205 44.4
FAN01G1160 Fragaria x ananassa HOM05D007158 ORTHO05D007424 1.3e-19 101.7 205 44.4
Potri.004G094500 Populus trichocarpa HOM05D007158 ORTHO05D007424 1.7e-19 101.3 263 34.6
FAN10G2330 Fragaria x ananassa HOM05D007158 ORTHO05D007424 3.7e-19 100.1 205 46.3
TPR.G28397 Trifolium pratense HOM05D007158 ORTHO05D007424 3.7e-19 100.1 234 41.5
GSVIVG01030945001 Vitis vinifera HOM05D007158 ORTHO05D007424 6.3e-19 99.4 199 40.2
AUR62023262 Chenopodium quinoa HOM05D007158 ORTHO05D007424 1.1e-18 98.6 195 39.0
Rhsim10G0076900 Rhododendron simsii HOM05D007158 ORTHO05D007424 1.1e-18 98.6 190 41.1
Os01g0505700 Oryza sativa ssp. japonica HOM05D007158 ORTHO05D007424 1.4e-18 98.2 188 38.8
HPP92_023114 Vanilla planifolia HOM05D007158 ORTHO05D007424 1.4e-18 98.2 224 46.0
arahy.Tifrunner.gnm1.ann1.5M3IQK Arachis hypogaea HOM05D007158 ORTHO05D007424 2.4e-18 97.4 263 39.5
Sabra04G0063800 Salix brachista HOM05D007158 ORTHO05D007424 7.7e-17 92.4 268 37.3
Psat3g097040 Pisum sativum HOM05D007158 ORTHO05D007424 1.0e-16 92.0 261 35.6
arahy.Tifrunner.gnm1.ann1.896A9W Arachis hypogaea HOM05D007158 ORTHO05D007424 1.7e-16 91.3 209 42.6
Eucgr.F02798 Eucalyptus grandis HOM05D007158 ORTHO05D007424 2.2e-16 90.9 195 39.5
vmacro18064 Vaccinium macrocarpon HOM05D007158 ORTHO05D007424 2.2e-16 90.9 118 49.2
FAN03G1259 Fragaria x ananassa HOM05D007158 ORTHO05D007424 3.8e-16 90.1 195 45.1
FAN23G0239 Fragaria x ananassa HOM05D007158 ORTHO05D007424 3.8e-16 90.1 259 40.9
Ca_08098_v3 Cicer arietinum L. HOM05D007158 ORTHO05D007424 6.5e-16 89.4 199 45.7
Haze_14197 Corylus avellana HOM05D007158 ORTHO05D007424 6.5e-16 89.4 172 42.4
EL10Ac2g04517 Beta vulgaris HOM05D007158 ORTHO05D007424 8.5e-16 89.0 194 39.2
FAN04G1654 Fragaria x ananassa HOM05D007158 ORTHO05D007424 8.5e-16 89.0 195 45.1
CiPaw.04G044500 Carya illinoinensis HOM05D007158 ORTHO05D007424 5.5e-15 86.3 285 32.3
Oeu061824.1 Olea europaea HOM05D007158 ORTHO05D007424 9.4e-15 85.5 187 38.5
PSO384G2845 Papaver somniferum HOM05D007158 ORTHO05D007424 2.1e-14 84.3 128 46.9
Rhsim10G0074300 Rhododendron simsii HOM05D007158 ORTHO05D007424 3.6e-14 83.6 172 36.0
SHI25695 Sapria himalayana HOM05D000002 ORTHO05D000001 8.0e-14 82.4 91 48.4
Pp3c14_9040 Physcomitrium patens HOM05D007158 ORTHO05D007424 5.9e-09 66.2 71 52.1
unitig_21.g20970 Utricularia gibba HOM05D007158 ORTHO05D007424 5.9e-09 66.2 238 31.1
SMO119G0024 Selaginella moellendorffii HOM05D007158 ORTHO05D007424 7.7e-09 65.9 100 42.0
Sp2g04080 Schrenkiella parvula HOM05D011338 ORTHO05D007424 1.7e-08 64.7 93 41.9
THA.LOC104809979 Tarenaya hassleriana HOM05D007158 ORTHO05D007424 5.0e-08 63.2 269 27.9
BraA01t03075Z Brassica rapa HOM05D011338 ORTHO05D007424 1.9e-07 61.2 92 38.0
A01p29410 Brassica napus HOM05D011338 ORTHO05D007424 2.5e-07 60.8 89 40.4
AagrBONN_evm.TU.Sc2ySwM_117.711 Anthoceros agrestis HOM05D007158 ORTHO05D007424 3.3e-07 60.5 97 39.2
CARHR052290 Cardamine hirsuta HOM05D007158 ORTHO05D007424 1.2e-06 58.5 62 50.0
Mapoly0099s0058 Marchantia polymorpha HOM05D007158 ORTHO05D007424 1.2e-06 58.5 201 29.9
BcaC09g49385 Brassica carinata HOM05D011338 ORTHO05D007424 2.1e-06 57.8 91 38.5
C01p37190 Brassica napus HOM05D011338 ORTHO05D007424 2.1e-06 57.8 91 38.5
Carub.0002s0469 Capsella rubella HOM05D007158 ORTHO05D007424 2.8e-06 57.4 67 44.8


User provided reference genes

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