Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold202G41446 Striga asiatica HOM05D003413 ORTHO05D406077 1.6e-137 492.7 239 100.0
Haze_26535 Corylus avellana HOM05D003413 ORTHO05D004197 1.1e-08 64.7 216 26.4
PRCOL_00003194 Prasinoderma coloniale HOM05D003413 ORTHO05D004197 1.1e-08 64.7 192 24.5
Potri.008G177000 Populus trichocarpa HOM05D003413 ORTHO05D004197 1.2e-07 61.2 192 25.0
Hund25449 Selenicereus undatus HOM05D003413 ORTHO05D004197 1.2e-07 61.2 192 25.0
arahy.Tifrunner.gnm1.ann1.3BP915 Arachis hypogaea HOM05D001045 ORTHO05D004836 1.6e-07 60.8 187 25.1
Ah.03g136290 Amaranthus hybridus HOM05D003413 ORTHO05D004197 3.6e-07 59.7 192 25.5
CiPaw.05G112700 Carya illinoinensis HOM05D003413 ORTHO05D004197 3.6e-07 59.7 189 24.9
CiPaw.06G100800 Carya illinoinensis HOM05D003413 ORTHO05D004197 3.6e-07 59.7 192 24.5
MCO06G264 Micromonas commoda HOM05D003413 ORTHO05D004197 4.6e-07 59.3 192 24.5
Potri.010G058100 Populus trichocarpa HOM05D003413 ORTHO05D004197 4.6e-07 59.3 189 24.9
AUR62005593 Chenopodium quinoa HOM05D003413 ORTHO05D004197 6.1e-07 58.9 192 25.5
AUR62024135 Chenopodium quinoa HOM05D003413 ORTHO05D004197 6.1e-07 58.9 192 25.5
Cpa.g.sc43.24 Carica papaya HOM05D003413 ORTHO05D004197 7.9e-07 58.5 192 24.0
Dinv14816 Davidia involucrata HOM05D003413 ORTHO05D004197 7.9e-07 58.5 189 24.3
Cc11_g16770 Coffea canephora HOM05D003413 ORTHO05D004197 1.0e-06 58.2 192 24.5
SMO147G0030 Selaginella moellendorffii HOM05D003413 ORTHO05D004197 1.0e-06 58.2 189 24.3
Actinidia08079 Actinidia chinensis HOM05D003413 ORTHO05D004197 1.4e-06 57.8 192 24.5
Lalb_Chr07g0183311 Lupinus albus HOM05D003413 ORTHO05D004197 1.4e-06 57.8 193 23.3
Nn3g16510 Nelumbo nucifera HOM05D003413 ORTHO05D004197 1.4e-06 57.8 189 24.3
Oeu020301.1 Olea europaea HOM05D003413 ORTHO05D004197 1.4e-06 57.8 187 25.1
CSS0027762 Camellia sinensis var. sinensis HOM05D003413 ORTHO05D004197 1.8e-06 57.4 189 24.9
Rhsim12G0028500 Rhododendron simsii HOM05D003413 ORTHO05D004197 1.8e-06 57.4 192 24.5
Medtr3g089040 Medicago truncatula HOM05D003413 ORTHO05D004197 2.3e-06 57.0 189 23.3
PGR119G0878 Punica granatum HOM05D003413 ORTHO05D004197 2.3e-06 57.0 187 24.6
unitig_62.g23655 Utricularia gibba HOM05D003413 ORTHO05D004197 2.3e-06 57.0 189 22.8
CANSAT01G2316 Cannabis sativa HOM05D003413 ORTHO05D004197 3.0e-06 56.6 189 24.3
Ca_24508_v3 Cicer arietinum L. HOM05D003413 ORTHO05D004197 3.0e-06 56.6 189 23.3
Lalb_Chr12g0202151 Lupinus albus HOM05D003413 ORTHO05D004197 3.0e-06 56.6 189 23.3
PSO063G0094 Papaver somniferum HOM05D003413 ORTHO05D004197 3.0e-06 56.6 192 23.4
PSO782G4279 Papaver somniferum HOM05D003413 ORTHO05D004197 3.0e-06 56.6 192 23.4
CAN.G694.91 Capsicum annuum HOM05D003413 ORTHO05D004197 3.9e-06 56.2 192 23.4
Mapoly0021s0078 Marchantia polymorpha HOM05D003413 ORTHO05D004197 5.1e-06 55.8 189 23.3
Pp3c11_2970 Physcomitrium patens HOM05D003413 ORTHO05D004197 5.1e-06 55.8 189 23.3


User provided reference genes

Program Settings