Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold201G41409 Striga asiatica HOM05D006278 ORTHO05D007526 4.9e-268 927.5 585 100.0
MSTRG.1269 Avicennia marina HOM05D006278 ORTHO05D007526 6.8e-68 262.7 392 42.9
Oeu049934.1 Olea europaea HOM05D006278 ORTHO05D007526 3.1e-65 253.8 375 44.5
Dinv36098 Davidia involucrata HOM05D006278 ORTHO05D007526 7.0e-57 226.1 428 37.9
Migut.O00967 Erythranthe guttata HOM05D006278 ORTHO05D007526 3.5e-56 223.8 204 59.8
Thecc.08G029100 Theobroma cacao HOM05D006278 ORTHO05D007526 5.0e-55 219.9 225 52.4
COL.COLO4_26292 Corchorus olitorius HOM05D006278 ORTHO05D007526 1.1e-54 218.8 224 50.9
Peaxi162Scf00303g00043 Petunia axillaris HOM05D006278 ORTHO05D007526 3.3e-54 217.2 328 43.0
Ciclev10000483m.g Citrus clementina HOM05D006278 ORTHO05D007526 4.7e-53 213.4 266 47.0
DCAR_017552 Daucus carota HOM05D006278 ORTHO05D007526 5.2e-52 209.9 374 39.8
Haze_13828 Corylus avellana HOM05D006278 ORTHO05D007526 6.8e-52 209.5 365 39.2
TWI12G1431 Tripterygium wilfordii HOM05D006278 ORTHO05D007526 1.5e-51 208.4 282 43.3
Rhsim06G0031900 Rhododendron simsii HOM05D006278 ORTHO05D007526 4.4e-51 206.8 474 34.4
Manes.05G158000 Manihot esculenta HOM05D006278 ORTHO05D007526 4.9e-50 203.4 353 40.2
PGSC0003DMG400003686 Solanum tuberosum HOM05D006278 ORTHO05D007526 4.9e-50 203.4 366 39.3
Cfa008229 Carpinus fangiana HOM05D006278 ORTHO05D007526 1.1e-49 202.2 373 38.3
Cpa.g.sc3.303 Carica papaya HOM05D006278 ORTHO05D007526 1.9e-49 201.4 245 46.5
Duzib041G0028 Durio zibethinus HOM05D006278 ORTHO05D007526 1.9e-49 201.4 256 47.3
Potri.002G034700 Populus trichocarpa HOM05D006278 ORTHO05D007526 2.4e-49 201.1 347 37.8
Lj4P787T11 Lonicera japonica HOM05D006278 ORTHO05D007526 3.2e-49 200.7 337 41.2
Nitab4.5_0002224g0110 Nicotiana tabacum HOM05D006278 ORTHO05D007526 9.2e-49 199.1 382 37.2
CSS0025999 Camellia sinensis var. sinensis HOM05D006278 ORTHO05D007526 2.7e-48 197.6 198 51.0
Gohir.A06G009400 Gossypium hirsutum HOM05D006278 ORTHO05D007526 1.3e-47 195.3 260 43.8
Sabra02G0027900 Salix brachista HOM05D006278 ORTHO05D007526 1.3e-47 195.3 263 41.4
Gohir.D06G004900 Gossypium hirsutum HOM05D006278 ORTHO05D007526 1.7e-47 194.9 260 43.8
Gorai.010G009500 Gossypium raimondii HOM05D006278 ORTHO05D007526 1.7e-47 194.9 260 43.8
Sc02g0005980 Simmondsia chinensis HOM05D006278 ORTHO05D007526 2.3e-47 194.5 270 43.7
Sopen04g034110 Solanum pennellii HOM05D006278 ORTHO05D007526 2.3e-47 194.5 443 35.7
Atru.chr13.448 Acer truncatum HOM05D006278 ORTHO05D007526 3.0e-47 194.1 384 37.0
CiPaw.04G062900 Carya illinoinensis HOM05D006278 ORTHO05D007526 5.6e-46 189.9 446 34.5
Aqoxy6G01136 Aquilegia oxysepala HOM05D006278 ORTHO05D007526 1.6e-45 188.3 361 34.1
Duzib093G1165 Durio zibethinus HOM05D006278 ORTHO05D007526 2.8e-45 187.6 301 39.9
Nitab4.5_0004768g0010 Nicotiana tabacum HOM05D006278 ORTHO05D007526 4.7e-45 186.8 372 39.5
Solyc04g080520.1 Solanum lycopersicum HOM05D006278 ORTHO05D007526 4.7e-45 186.8 483 30.4
Oeu029831.2 Olea europaea HOM05D006278 ORTHO05D007526 1.8e-44 184.9 287 43.9
PSO675G3973 Papaver somniferum HOM05D006278 ORTHO05D007526 1.8e-44 184.9 234 44.0
CAN.G424.60 Capsicum annuum HOM05D006278 ORTHO05D007526 4.0e-44 183.7 469 36.2
Nitab4.5_0000017g0170 Nicotiana tabacum HOM05D006278 ORTHO05D007526 1.2e-43 182.2 447 36.0
Eucgr.F01578 Eucalyptus grandis HOM05D006278 ORTHO05D007526 1.3e-42 178.7 376 33.0
Ah.05g169430 Amaranthus hybridus HOM05D006278 ORTHO05D007526 3.7e-42 177.2 234 43.2
CAN.G1226.35 Capsicum annuum HOM05D006278 ORTHO05D007526 3.7e-42 177.2 481 33.5
QL12p039628 Quercus lobata HOM05D006278 ORTHO05D007526 1.9e-41 174.9 402 35.3
TAR101G0003 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.9e-41 174.9 273 38.8
Aa31LG4G5490 Aethionema arabicum HOM05D006278 ORTHO05D007526 4.6e-40 170.2 223 43.9
MBI10_g18263_MAGBIO Magnolia biondii HOM05D006278 ORTHO05D007526 1.9e-38 164.9 468 35.9
PSO541G0933 Papaver somniferum HOM05D006278 ORTHO05D007526 3.6e-37 160.6 454 31.1
MD08G1030100 Malus domestica HOM05D006278 ORTHO05D007526 1.4e-36 158.7 456 33.8
AUR62041670 Chenopodium quinoa HOM05D006278 ORTHO05D007526 1.8e-36 158.3 298 38.6
Lalb_Chr24g0398921 Lupinus albus HOM05D006278 ORTHO05D007526 2.3e-36 157.9 467 32.1
Sp5g30420 Schrenkiella parvula HOM05D006278 ORTHO05D007526 4.0e-36 157.1 271 40.2
TAR381G0716 Trochodendron aralioides HOM05D006278 ORTHO05D007526 5.2e-36 156.8 303 37.0
C06p49230 Brassica napus HOM05D006278 ORTHO05D007526 6.8e-36 156.4 219 42.9
CANSAT35G1968 Cannabis sativa HOM05D006278 ORTHO05D007526 6.8e-36 156.4 509 30.3
PGSC0003DMG400005375 Solanum tuberosum HOM05D006278 ORTHO05D007526 8.9e-36 156.0 358 36.9
TAR245G0008 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.5e-35 155.2 303 37.0
BcaNung04385 Brassica carinata HOM05D006278 ORTHO05D007526 2.0e-35 154.8 212 44.3
A07p40840 Brassica napus HOM05D006278 ORTHO05D007526 3.4e-35 154.1 237 41.8
BraA07t31626Z Brassica rapa HOM05D006278 ORTHO05D007526 4.4e-35 153.7 219 43.4
AUR62033855 Chenopodium quinoa HOM05D006278 ORTHO05D007526 4.4e-35 153.7 309 37.5
CiPaw.03G096900 Carya illinoinensis HOM05D006278 ORTHO05D007526 9.9e-35 152.5 358 34.6
Thhalv10018443m.g Eutrema salsugineum HOM05D006278 ORTHO05D007526 1.7e-34 151.8 190 46.8
AT1G75260 Arabidopsis thaliana HOM05D006278 ORTHO05D007526 2.9e-34 151.0 212 42.9
BcaC08g47365 Brassica carinata HOM05D006278 ORTHO05D007526 4.9e-34 150.2 269 39.0
BolC6t39956H Brassica oleracea HOM05D006278 ORTHO05D007526 4.9e-34 150.2 269 38.7
PGR004G0534 Punica granatum HOM05D006278 ORTHO05D007526 1.4e-33 148.7 369 31.4
AL2G35180 Arabidopsis lyrata HOM05D006278 ORTHO05D007526 4.1e-33 147.1 242 39.3
Carub.0002s2208 Capsella rubella HOM05D006278 ORTHO05D007526 4.1e-33 147.1 262 38.2
Peaxi162Scf00020g00184 Petunia axillaris HOM05D006278 ORTHO05D007526 1.6e-32 145.2 444 30.2
unitig_0.g2047 Utricularia gibba HOM05D006278 ORTHO05D007526 1.6e-32 145.2 181 49.7
CARHR068590 Cardamine hirsuta HOM05D006278 ORTHO05D007526 6.0e-32 143.3 235 42.1
Dinv39433 Davidia involucrata HOM05D006278 ORTHO05D007526 3.9e-31 140.6 241 41.5
Lj5g0016594 Lotus japonicus HOM05D006278 ORTHO05D007526 6.6e-31 139.8 455 29.7
ECA247G1288 Erigeron canadensis HOM05D006278 ORTHO05D007526 8.6e-31 139.4 192 44.3
RcHm_v2.0_Chr6g0301251 Rosa chinensis HOM05D006278 ORTHO05D007526 8.6e-31 139.4 224 41.1
FvH4_2g39641 Fragaria vesca HOM05D006278 ORTHO05D007526 1.1e-30 139.0 272 39.3
ClCG08G014920 Citrullus lanatus HOM05D006278 ORTHO05D007526 1.5e-30 138.7 244 37.7
Potri.005G228400 Populus trichocarpa HOM05D006278 ORTHO05D007526 2.5e-30 137.9 275 34.9
HPP92_004792 Vanilla planifolia HOM05D006278 ORTHO05D007526 4.3e-30 137.1 205 39.0
Nn2g14857 Nelumbo nucifera HOM05D006278 ORTHO05D007526 9.6e-30 136.0 234 37.6
THA.LOC104809215 Tarenaya hassleriana HOM05D006278 ORTHO05D007526 1.2e-29 135.6 222 41.0
FAN20G2275 Fragaria x ananassa HOM05D006278 ORTHO05D007526 1.6e-29 135.2 267 37.8
Glyma.14G073601 Glycine max HOM05D006278 ORTHO05D007526 3.4e-27 127.5 248 35.1
Sabra05G0176300 Salix brachista HOM05D006278 ORTHO05D007526 1.7e-26 125.2 335 31.3
ATR0568G158 Amborella trichopoda HOM05D006278 ORTHO05D007526 4.9e-26 123.6 247 37.7
Glyma.17G251400 Glycine max HOM05D006278 ORTHO05D007526 1.1e-25 122.5 248 35.5
Medtr3g111950 Medicago truncatula HOM05D006278 ORTHO05D007526 1.1e-25 122.5 277 33.6
CsaV3_2G028850 Cucumis sativus L. HOM05D006278 ORTHO05D007526 4.2e-25 120.6 465 28.2
Lj1g0002957 Lotus japonicus HOM05D006278 ORTHO05D007526 4.2e-25 120.6 216 36.1
Prupe.1G377800 Prunus persica HOM05D006278 ORTHO05D007526 4.2e-25 120.6 483 30.4
Sed0000803 Sechium edule HOM05D006278 ORTHO05D007526 7.1e-25 119.8 453 28.9
CDE06G2487 Ceratophyllum demersum HOM05D006278 ORTHO05D007526 1.2e-24 119.0 220 36.4
Actinidia15341 Actinidia chinensis HOM05D006278 ORTHO05D007526 2.7e-24 117.9 416 30.3
TPR.G12310 Trifolium pratense HOM05D006278 ORTHO05D007526 6.0e-24 116.7 280 31.1
VMungo1309G1357 Vigna mungo HOM05D006278 ORTHO05D007526 3.9e-23 114.0 264 31.8
Ca_15506_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 5.1e-23 113.6 216 35.2
VMungo0647G1119 Vigna mungo HOM05D006278 ORTHO05D007526 1.9e-22 111.7 358 29.1
Psat5g012120 Pisum sativum HOM05D006278 ORTHO05D007526 2.5e-22 111.3 211 33.6
Ca_13364_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 9.6e-22 109.4 314 31.2
Phvul.009G058700 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 6.2e-21 106.7 362 28.5
Glyma.04G031100 Glycine max HOM05D006278 ORTHO05D007526 2.4e-20 104.8 353 26.1
Medtr1g022365 Medicago truncatula HOM05D006278 ORTHO05D007526 2.4e-20 104.8 335 28.7
arahy.Tifrunner.gnm1.ann1.7TI70S Arachis hypogaea HOM05D006278 ORTHO05D007526 9.0e-20 102.8 277 31.4
Phvul.001G013600 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 1.2e-19 102.4 480 27.1
MD15G1025500 Malus domestica HOM05D006278 ORTHO05D007526 2.6e-19 101.3 181 40.3
TAR376G1184 Trochodendron aralioides HOM05D006278 ORTHO05D007526 3.4e-19 100.9 404 27.5
arahy.Tifrunner.gnm1.ann1.K7D9EI Arachis hypogaea HOM05D006278 ORTHO05D007526 7.6e-19 99.8 327 29.4
Glyma.06G031201 Glycine max HOM05D006278 ORTHO05D007526 7.6e-19 99.8 350 27.7
Psat6g008120 Pisum sativum HOM05D006278 ORTHO05D007526 2.9e-18 97.8 301 28.9
FAN27G0814 Fragaria x ananassa HOM05D006278 ORTHO05D007526 8.4e-18 96.3 233 35.2
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 1.9e-17 95.1 280 31.1
FAN15G2069 Fragaria x ananassa HOM05D006278 ORTHO05D007526 7.1e-17 93.2 270 31.5
TAR376G0700 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.2e-16 92.4 401 27.2
Nn5g29644 Nelumbo nucifera HOM05D006278 ORTHO05D007526 2.7e-16 91.3 416 26.4
TPR.G20186 Trifolium pratense HOM05D006278 ORTHO05D007526 8.7e-15 86.3 419 25.8
DCAR_019537 Daucus carota HOM05D006278 ORTHO05D007526 2.5e-14 84.7 265 28.7
CDE04G1483 Ceratophyllum demersum HOM05D003484 ORTHO05D004152 3.3e-14 84.3 308 28.6
Gohir.A03G079100 Gossypium hirsutum HOM05D000342 ORTHO05D000217 3.3e-14 84.3 175 36.6
Nitab4.5_0003711g0040 Nicotiana tabacum HOM05D006278 ORTHO05D007526 5.6e-14 83.6 124 41.9
Gohir.D02G095000 Gossypium hirsutum HOM05D000342 ORTHO05D000217 7.3e-14 83.2 175 37.1
DCAR_020977 Daucus carota HOM05D006278 ORTHO05D007526 2.8e-13 81.3 264 29.5
Gorai.005G108300 Gossypium raimondii HOM05D000342 ORTHO05D000217 4.8e-13 80.5 175 36.0
ECA232G2514 Erigeron canadensis HOM05D006278 ORTHO05D007526 4.0e-12 77.4 350 25.1
CANSAT25G3418 Cannabis sativa HOM05D006278 ORTHO05D007526 4.9e-10 70.5 406 24.1
AUR62004535 Chenopodium quinoa HOM05D004242 ORTHO05D004349 8.4e-10 69.7 110 40.9
AUR62022719 Chenopodium quinoa HOM05D004242 ORTHO05D004349 2.4e-09 68.2 112 39.3
Sed0017381 Sechium edule HOM05D004242 ORTHO05D004349 3.2e-09 67.8 206 26.2
MBI13_g41464_MAGBIO Magnolia biondii HOM05D004242 ORTHO05D004349 7.1e-09 66.6 112 37.5
Oeu004972.1 Olea europaea HOM05D004242 ORTHO05D004349 9.3e-09 66.2 232 29.7
Rhsim07G0001600 Rhododendron simsii HOM05D004242 ORTHO05D004349 9.3e-09 66.2 125 33.6
Lalb_Chr08g0245891 Lupinus albus HOM05D006278 ORTHO05D007526 1.2e-08 65.9 145 33.8
PSO210G2709 Papaver somniferum HOM05D004242 ORTHO05D004349 1.2e-08 65.9 149 29.5
Actinidia25370 Actinidia chinensis HOM05D004242 ORTHO05D004349 1.6e-08 65.5 192 29.2
ClCG05G000580 Citrullus lanatus HOM05D004242 ORTHO05D004349 1.6e-08 65.5 206 31.1
Nitab4.5_0000508g0190 Nicotiana tabacum HOM05D004242 ORTHO05D004349 2.7e-08 64.7 220 28.6
Sopen08g021310 Solanum pennellii HOM05D004242 ORTHO05D004349 2.7e-08 64.7 136 33.1
Duzib138G0794 Durio zibethinus HOM05D004242 ORTHO05D004349 3.5e-08 64.3 114 36.8
SEGI_20460 Sequoiadendron giganteum HOM05D004242 ORTHO05D004349 3.5e-08 64.3 183 31.1
Oeu042952.1 Olea europaea HOM05D004242 ORTHO05D004349 4.6e-08 63.9 296 26.0
CDE02G1230 Ceratophyllum demersum HOM05D004242 ORTHO05D004349 6.0e-08 63.5 221 27.1
Solyc08g067370.1 Solanum lycopersicum HOM05D004242 ORTHO05D004349 6.0e-08 63.5 136 31.6
SGA_v2.0_scaffold98G29435 Striga asiatica HOM05D004242 ORTHO05D004349 6.0e-08 63.5 212 27.4
Hma1.2p1_0180F.1_g079790 Hydrangea macrophylla HOM05D004242 ORTHO05D004349 1.0e-07 62.8 143 35.0
arahy.Tifrunner.gnm1.ann1.1EJ222 Arachis hypogaea HOM05D004242 ORTHO05D004349 1.3e-07 62.4 180 28.9
Glyma.03G259500 Glycine max HOM05D004242 ORTHO05D004349 1.3e-07 62.4 110 30.9
CiPaw.02G043100 Carya illinoinensis HOM05D004242 ORTHO05D004349 2.3e-07 61.6 129 34.1
Eucgr.D02643 Eucalyptus grandis HOM05D004242 ORTHO05D004349 2.3e-07 61.6 115 35.7
TWI59G0661 Tripterygium wilfordii HOM05D004242 ORTHO05D004349 3.0e-07 61.2 184 27.2
PSO761G0055 Papaver somniferum HOM05D004242 ORTHO05D004349 3.9e-07 60.8 149 29.5
arahy.Tifrunner.gnm1.ann1.16GZH2 Arachis hypogaea HOM05D004242 ORTHO05D004349 5.1e-07 60.5 180 29.4
MSTRG.28279 Avicennia marina HOM05D004242 ORTHO05D004349 5.1e-07 60.5 207 29.0
Potri.002G175400 Populus trichocarpa HOM05D004242 ORTHO05D004349 5.1e-07 60.5 137 29.2
EL10Ac1g00218 Beta vulgaris HOM05D004242 ORTHO05D004349 6.7e-07 60.1 186 31.2
Peaxi162Scf00014g00294 Petunia axillaris HOM05D004242 ORTHO05D004349 8.7e-07 59.7 252 25.8
Gohir.D07G140400 Gossypium hirsutum HOM05D004242 ORTHO05D004349 1.1e-06 59.3 109 33.0
CiPaw.02G043200 Carya illinoinensis HOM05D004242 ORTHO05D004349 1.5e-06 58.9 231 25.5
Gohir.D11G103800 Gossypium hirsutum HOM05D004242 ORTHO05D004349 1.5e-06 58.9 170 27.1
Gohir.A07G135500 Gossypium hirsutum HOM05D004242 ORTHO05D004349 1.9e-06 58.5 109 32.1
Nitab4.5_0005697g0010 Nicotiana tabacum HOM05D004242 ORTHO05D004349 1.9e-06 58.5 266 26.3
TPR.G4684 Trifolium pratense HOM05D004242 ORTHO05D004349 1.9e-06 58.5 113 32.7
Cfa003761 Carpinus fangiana HOM05D004242 ORTHO05D004349 2.5e-06 58.2 194 26.8
Duzib133G0806 Durio zibethinus HOM05D004242 ORTHO05D004349 2.5e-06 58.2 102 34.3
Gorai.001G152400 Gossypium raimondii HOM05D004242 ORTHO05D004349 2.5e-06 58.2 109 32.1
PGR031G2923 Punica granatum HOM05D004242 ORTHO05D004349 2.5e-06 58.2 113 33.6
Sabra14G0075500 Salix brachista HOM05D004242 ORTHO05D004349 2.5e-06 58.2 234 24.8
Aqoxy2G02545 Aquilegia oxysepala HOM05D004242 ORTHO05D004349 3.3e-06 57.8 121 32.2
Gohir.A11G099300 Gossypium hirsutum HOM05D004242 ORTHO05D004349 3.3e-06 57.8 186 26.9
Gorai.007G111100 Gossypium raimondii HOM05D004242 ORTHO05D004349 3.3e-06 57.8 170 26.5
ATR0796G195 Amborella trichopoda HOM05D004242 ORTHO05D004349 4.3e-06 57.4 209 28.7
MELO3C022249.2 Cucumis melo HOM05D004242 ORTHO05D004349 4.3e-06 57.4 154 27.9
Lsat_1_v5_gn_8_20301 Lactuca sativa HOM05D004242 ORTHO05D004349 5.6e-06 57.0 146 31.5
Lalb_Chr04g0261391 Lupinus albus HOM05D004242 ORTHO05D004349 5.6e-06 57.0 115 32.2
PGSC0003DMG400007374 Solanum tuberosum HOM05D004242 ORTHO05D004349 5.6e-06 57.0 231 27.3
TWI14G0118 Tripterygium wilfordii HOM05D004242 ORTHO05D004349 5.6e-06 57.0 133 30.1
BcaC02g12659 Brassica carinata HOM05D004242 ORTHO05D004349 7.4e-06 56.6 217 27.6
CSS0005133 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 7.4e-06 56.6 178 29.8
CSS0009998 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 7.4e-06 56.6 178 29.8
Phvul.006G115800 Phaseolus vulgaris HOM05D004242 ORTHO05D004349 7.4e-06 56.6 278 22.7
Psat3g001320 Pisum sativum HOM05D004242 ORTHO05D004349 7.4e-06 56.6 110 35.5
Potri.014G102466 Populus trichocarpa HOM05D004242 ORTHO05D004349 7.4e-06 56.6 114 33.3
Lsat_1_v5_gn_3_140940 Lactuca sativa HOM05D004242 ORTHO05D004349 9.6e-06 56.2 106 34.9


User provided reference genes

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