Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 7.9e-73 276.9 134 100.0
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 6.5e-59 230.7 134 83.6
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 8.3e-54 213.8 134 74.6
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 9.1e-53 210.3 134 73.9
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 3.5e-52 208.4 134 71.6
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 4.5e-52 208.0 134 74.6
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 2.5e-50 202.2 132 72.0
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 2.1e-49 199.1 134 72.4
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 6.8e-48 194.1 132 66.7
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 3.4e-47 191.8 132 68.9
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 3.4e-47 191.8 132 68.9
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 7.5e-47 190.7 136 65.4
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 7.5e-47 190.7 132 68.9
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 1.3e-46 189.9 133 68.4
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 2.8e-46 188.7 134 66.4
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 2.8e-46 188.7 134 66.4
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 3.7e-46 188.3 126 69.8
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 4.9e-46 188.0 140 65.7
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 4.9e-46 188.0 140 65.7
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 4.9e-46 188.0 132 68.2
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 8.3e-46 187.2 140 65.0
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 1.1e-45 186.8 146 65.1
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 1.8e-45 186.0 140 65.0
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 1.8e-45 186.0 140 65.0
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 2.4e-45 185.7 145 62.1
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 2.4e-45 185.7 135 66.7
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 9.1e-45 183.7 143 62.9
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 1.2e-44 183.3 148 62.8
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 1.2e-44 183.3 135 65.9
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 1.6e-44 183.0 141 63.8
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 1.6e-44 183.0 141 63.1
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 1.6e-44 183.0 141 63.8
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 1.6e-44 183.0 141 63.8
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 1.6e-44 183.0 141 63.1
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 1.6e-44 183.0 146 62.3
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 3.5e-44 181.8 138 66.7
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 3.5e-44 181.8 134 64.9
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 3.5e-44 181.8 132 66.7
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 4.5e-44 181.4 145 61.4
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 5.9e-44 181.0 137 67.2
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 5.9e-44 181.0 134 64.9
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 7.7e-44 180.6 134 64.9
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 1.0e-43 180.3 145 61.4
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 1.0e-43 180.3 135 66.7
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 1.3e-43 179.9 131 64.1
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 1.7e-43 179.5 137 66.4
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 2.9e-43 178.7 136 66.2
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 3.8e-43 178.3 134 62.7
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 3.8e-43 178.3 138 65.2
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 5.0e-43 177.9 144 59.7
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 1.1e-42 176.8 135 64.4
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 1.1e-42 176.8 135 64.4
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 1.5e-42 176.4 132 62.1
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 1.9e-42 176.0 134 64.9
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 1.9e-42 176.0 134 63.4
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 1.9e-42 176.0 138 64.5
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 3.3e-42 175.3 135 64.4
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 3.3e-42 175.3 131 65.6
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 5.6e-42 174.5 96 79.2
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 5.6e-42 174.5 135 63.7
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 7.2e-42 174.1 141 64.5
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 7.2e-42 174.1 136 64.7
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 7.2e-42 174.1 136 64.7
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 9.5e-42 173.7 132 64.4
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 9.5e-42 173.7 104 75.0
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 1.2e-41 173.3 135 63.7
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 1.6e-41 172.9 136 64.7
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 2.1e-41 172.6 141 61.7
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 1.0e-40 170.2 134 61.9
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 1.2e-39 166.8 102 71.6
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 1.5e-39 166.4 139 61.2
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 2.0e-39 166.0 136 61.8
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 3.4e-39 165.2 145 62.1
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 4.4e-39 164.9 135 60.7
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 4.4e-39 164.9 145 61.4
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 7.5e-39 164.1 136 61.0
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 7.5e-39 164.1 136 61.0
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 7.5e-39 164.1 132 59.8
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 9.8e-39 163.7 133 63.2
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 1.3e-38 163.3 139 60.4
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 1.3e-38 163.3 134 58.2
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 1.7e-38 162.9 136 61.0
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 3.7e-38 161.8 135 60.7
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 3.7e-38 161.8 136 61.0
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 3.7e-38 161.8 133 57.9
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 6.4e-38 161.0 111 67.6
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 6.4e-38 161.0 134 60.4
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 6.4e-38 161.0 134 60.4
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 1.4e-37 159.8 140 60.0
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 1.8e-37 159.5 100 72.0
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 1.8e-37 159.5 134 57.5
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 2.4e-37 159.1 137 58.4
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 7.0e-37 157.5 115 67.8
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 2.7e-36 155.6 135 60.0
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 2.7e-36 155.6 100 71.0
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 2.7e-36 155.6 141 59.6
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 7.8e-36 154.1 116 66.4
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 3.9e-35 151.8 135 57.0
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 6.6e-35 151.0 101 69.3
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 8.6e-35 150.6 136 55.9
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 2.5e-34 149.1 140 57.1
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 3.3e-34 148.7 108 63.9
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 7.3e-34 147.5 105 63.8
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 7.3e-34 147.5 105 63.8
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 1.6e-33 146.4 122 57.4
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 1.6e-33 146.4 132 56.8
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 1.4e-32 143.3 96 70.8
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 3.1e-32 142.1 106 66.0
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 2.6e-31 139.0 118 57.6
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 3.4e-31 138.7 111 59.5
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 5.8e-31 137.9 111 55.0
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 4.9e-30 134.8 121 53.7
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 4.6e-28 128.3 104 54.8
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 1.1e-26 123.6 130 49.2
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 5.6e-26 121.3 114 48.2
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 5.2e-24 114.8 103 51.5
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 3.4e-23 112.1 104 52.9
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 5.8e-23 111.3 74 71.6
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 4.1e-21 105.1 75 66.7
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 7.1e-21 104.4 74 63.5
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 8.6e-19 97.4 102 45.1
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 2.1e-17 92.8 76 48.7
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 8.1e-17 90.9 74 60.8
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 3.4e-15 85.5 58 70.7
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 1.3e-14 83.6 75 58.7
BcaC05g28396 Brassica carinata HOM05D006275 ORTHO05D003437 3.6e-09 65.5 58 62.1
Sabra05G0177600 Salix brachista HOM05D006275 ORTHO05D007839 1.7e-06 56.6 55 47.3


User provided reference genes

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