Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold201G41384 Striga asiatica HOM05D001749 ORTHO05D001632 2.3e-107 392.5 238 100.0
SGA_v2.0_scaffold11G05819 Striga asiatica HOM05D001749 ORTHO05D001632 8.3e-49 198.0 234 52.1
Migut.C00753 Erythranthe guttata HOM05D001749 ORTHO05D001632 1.2e-44 184.1 243 53.5
MSTRG.25190 Avicennia marina HOM05D001749 ORTHO05D001632 3.9e-38 162.5 251 47.4
SalBow8G3194 Salvia bowleyana HOM05D001749 ORTHO05D001632 1.4e-32 144.1 238 45.8
SalBow8G4985 Salvia bowleyana HOM05D001749 ORTHO05D001632 1.4e-32 144.1 238 45.8
SGA_v2.0_scaffold328G48815 Striga asiatica HOM05D001749 ORTHO05D001632 3.2e-32 142.9 239 41.0
MSTRG.24281 Avicennia marina HOM05D001749 ORTHO05D001632 1.9e-29 133.7 232 40.5
Oeu030425.2 Olea europaea HOM05D001749 ORTHO05D001632 1.2e-26 124.4 241 43.2
Hma1.2p1_0469F.1_g159000 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 1.7e-22 110.5 252 38.9
Oeu063612.1 Olea europaea HOM05D001749 ORTHO05D001632 6.6e-22 108.6 241 33.6
Lj4C36T10 Lonicera japonica HOM05D001749 ORTHO05D001632 1.3e-20 104.4 233 36.5
Solyc04g080640.1 Solanum lycopersicum HOM05D001749 ORTHO05D001632 6.2e-20 102.1 253 32.8
Nitab4.5_0003265g0050 Nicotiana tabacum HOM05D001749 ORTHO05D001632 1.4e-19 100.9 253 35.2
Sopen04g034230 Solanum pennellii HOM05D001749 ORTHO05D001632 3.1e-19 99.8 253 32.8
Dinv36112 Davidia involucrata HOM05D003425 ORTHO05D003897 6.9e-19 98.6 231 33.3
Dinv39444 Davidia involucrata HOM05D001749 ORTHO05D001632 1.2e-18 97.8 235 37.0
PGSC0003DMG400003697 Solanum tuberosum HOM05D001749 ORTHO05D001632 3.4e-18 96.3 255 32.5
unitig_8.g4930 Utricularia gibba HOM05D001749 ORTHO05D001632 5.8e-18 95.5 242 32.6
CAN.G1226.48 Capsicum annuum HOM05D001749 ORTHO05D001632 9.9e-18 94.7 243 30.5
Nitab4.5_0009228g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 2.2e-17 93.6 254 34.6
unitig_578.g16076 Utricularia gibba HOM05D001749 ORTHO05D001632 3.8e-17 92.8 228 30.3
Cc10_g02570 Coffea canephora HOM05D001749 ORTHO05D001632 1.4e-16 90.9 244 32.4
Peaxi162Scf00140g00031 Petunia axillaris HOM05D001749 ORTHO05D001632 9.3e-16 88.2 237 31.2
Rhsim06G0030100 Rhododendron simsii HOM05D001749 ORTHO05D001632 3.0e-14 83.2 239 33.1
CSS0005210 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 8.7e-14 81.6 222 29.7
Lsat_1_v5_gn_4_117861 Lactuca sativa HOM05D001749 ORTHO05D001632 1.1e-13 81.3 255 30.6
HanXRQChr09g0268971 Helianthus annuus HOM05D001749 ORTHO05D001632 1.3e-12 77.8 278 30.9
CSS0035839 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 3.1e-11 73.2 229 32.3
Nitab4.5_0000746g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 3.1e-11 73.2 252 28.2
Rhsim08G0119900 Rhododendron simsii HOM05D001749 ORTHO05D001632 4.0e-11 72.8 225 29.8
HanXRQChr16g0501491 Helianthus annuus HOM05D001749 ORTHO05D001632 9.0e-11 71.6 225 34.7
HanXRQChr13g0395401 Helianthus annuus HOM05D001749 ORTHO05D001632 2.0e-10 70.5 231 28.6
Peaxi162Scf00303g00092 Petunia axillaris HOM05D001749 ORTHO05D001632 2.0e-10 70.5 230 29.6
Actinidia22524 Actinidia chinensis HOM05D001749 ORTHO05D001632 1.7e-09 67.4 209 30.1
HanXRQChr04g0103991 Helianthus annuus HOM05D001749 ORTHO05D001632 1.7e-09 67.4 237 29.5
TAR381G0807 Trochodendron aralioides HOM05D001749 ORTHO05D001632 2.2e-09 67.0 247 27.5
MD05G1064000 Malus domestica HOM05D001749 ORTHO05D001632 4.9e-09 65.9 228 26.8
Lsat_1_v5_gn_5_27281 Lactuca sativa HOM05D001749 ORTHO05D001632 1.4e-08 64.3 256 29.7
Sc02g0005800 Simmondsia chinensis HOM05D001749 ORTHO05D001632 1.9e-08 63.9 244 31.1
Sc15g0007080 Simmondsia chinensis HOM05D001749 ORTHO05D001632 3.2e-08 63.2 227 31.3
DCAR_022466 Daucus carota HOM05D001749 ORTHO05D001632 7.1e-08 62.0 237 30.8
DCAR_013834 Daucus carota HOM05D001749 ORTHO05D001632 9.3e-08 61.6 227 30.0
MD10G1072700 Malus domestica HOM05D001749 ORTHO05D001632 1.2e-07 61.2 228 28.1
Aqoxy6G01165 Aquilegia oxysepala HOM05D001749 ORTHO05D001632 2.1e-07 60.5 242 26.0
FvH4_2g09200 Fragaria vesca HOM05D001749 ORTHO05D001632 4.6e-07 59.3 247 26.7
FAN15G1825 Fragaria x ananassa HOM05D001749 ORTHO05D001632 6.0e-07 58.9 247 26.7
FAN24G3069 Fragaria x ananassa HOM05D001749 ORTHO05D001632 7.9e-07 58.5 247 26.7
ClCG11G004240 Citrullus lanatus HOM05D001749 ORTHO05D001632 1.3e-06 57.8 229 29.7
CSS0042795 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 2.3e-06 57.0 225 28.0
DCAR_025960 Daucus carota HOM05D001749 ORTHO05D001632 2.3e-06 57.0 249 25.7
Nitab4.5_0019909g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 2.3e-06 57.0 193 28.5
RcHm_v2.0_Chr6g0265051 Rosa chinensis HOM05D001749 ORTHO05D001632 3.0e-06 56.6 247 26.3
Prupe.8G094100 Prunus persica HOM05D001749 ORTHO05D001632 8.7e-06 55.1 224 26.8


User provided reference genes

Program Settings