Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold201G41376 Striga asiatica HOM05D000364 ORTHO05D000235 1.3e-132 476.5 256 100.0
MSTRG.25196 Avicennia marina HOM05D000364 ORTHO05D000235 4.3e-27 125.9 401 32.4
SalBow7G1284 Salvia bowleyana HOM05D000364 ORTHO05D000235 4.9e-23 112.5 372 30.9
GSVIVG01009761001 Vitis vinifera HOM05D000364 ORTHO05D000235 1.1e-14 84.7 244 30.7
Oeu007028.1 Olea europaea HOM05D000364 ORTHO05D000235 1.2e-13 81.3 250 28.8
Duzib093G0998 Durio zibethinus HOM05D000364 ORTHO05D000235 2.1e-13 80.5 201 30.3
Peaxi162Scf00140g00812 Petunia axillaris HOM05D000364 ORTHO05D000235 2.1e-13 80.5 356 27.2
Nitab4.5_0005229g0040 Nicotiana tabacum HOM05D000364 ORTHO05D000235 4.6e-13 79.3 205 31.2
Ciclev10001291m.g Citrus clementina HOM05D000364 ORTHO05D000235 8.8e-12 75.1 238 27.7
Migut.C00762 Erythranthe guttata HOM05D000364 ORTHO05D000235 8.8e-12 75.1 238 31.9
Oeu052974.1 Olea europaea HOM05D000364 ORTHO05D000235 1.1e-11 74.7 232 29.3
unitig_578.g16078 Utricularia gibba HOM05D000364 ORTHO05D000235 4.3e-11 72.8 254 31.1
COL.COLO4_26254 Corchorus olitorius HOM05D000364 ORTHO05D000235 5.7e-11 72.4 235 27.2
Cc10_g02500 Coffea canephora HOM05D000364 ORTHO05D000235 1.3e-10 71.2 246 26.4
Nn5g29695 Nelumbo nucifera HOM05D000364 ORTHO05D000235 1.3e-10 71.2 216 29.6
PGR031G0303 Punica granatum HOM05D000364 ORTHO05D000235 1.7e-10 70.9 74 48.6
MSTRG.1254 Avicennia marina HOM05D000364 ORTHO05D000235 2.2e-10 70.5 88 52.3
TAR376G0747 Trochodendron aralioides HOM05D000364 ORTHO05D000235 2.2e-10 70.5 239 27.6
Nitab4.5_0003265g0040 Nicotiana tabacum HOM05D000364 ORTHO05D000235 3.7e-10 69.7 225 27.6
Potri.005G230800 Populus trichocarpa HOM05D000364 ORTHO05D000235 3.7e-10 69.7 247 27.9
Manes.18G020600 Manihot esculenta HOM05D000364 ORTHO05D000235 4.8e-10 69.3 221 29.4
Potri.002G032400 Populus trichocarpa HOM05D000364 ORTHO05D000235 6.3e-10 68.9 242 27.3
Sabra02G0026300 Salix brachista HOM05D000364 ORTHO05D000235 8.2e-10 68.6 42 71.4
Sabra05G0178200 Salix brachista HOM05D000364 ORTHO05D000235 1.8e-09 67.4 79 44.3
Solyc04g080710.4 Solanum lycopersicum HOM05D000364 ORTHO05D000235 2.4e-09 67.0 79 46.8
Sopen04g034300 Solanum pennellii HOM05D000364 ORTHO05D000235 2.4e-09 67.0 79 46.8
PGSC0003DMG400003746 Solanum tuberosum HOM05D000364 ORTHO05D000235 2.4e-09 67.0 79 46.8
Oeu022414.1 Olea europaea HOM05D000364 ORTHO05D000235 3.1e-09 66.6 180 31.1
QL02p009455 Quercus lobata HOM05D000364 ORTHO05D000235 1.2e-08 64.7 391 25.3
Actinidia15357 Actinidia chinensis HOM05D000364 ORTHO05D000235 1.5e-08 64.3 38 76.3
CSS0024653 Camellia sinensis var. sinensis HOM05D000364 ORTHO05D000235 1.5e-08 64.3 96 43.8
CAN.G710.11 Capsicum annuum HOM05D000364 ORTHO05D000235 2.6e-08 63.5 82 42.7
CiPaw.07G157900 Carya illinoinensis HOM05D000364 ORTHO05D000235 2.6e-08 63.5 43 69.8
Haze_22543 Corylus avellana HOM05D000364 ORTHO05D000235 2.6e-08 63.5 72 43.1
unitig_8.g4929 Utricularia gibba HOM05D002183 ORTHO05D002169 2.6e-08 63.5 291 26.1
vmacro21677 Vaccinium macrocarpon HOM05D000364 ORTHO05D000235 2.6e-08 63.5 48 66.7
Cfa013866 Carpinus fangiana HOM05D000364 ORTHO05D000235 3.4e-08 63.2 80 41.2
Duzib041G0470 Durio zibethinus HOM05D000364 ORTHO05D000235 4.5e-08 62.8 80 41.2
Thecc.08G032400 Theobroma cacao HOM05D000364 ORTHO05D000235 4.5e-08 62.8 81 40.7
Sed0025638 Sechium edule HOM05D000364 ORTHO05D000235 5.9e-08 62.4 63 52.4
Atru.chr13.418 Acer truncatum HOM05D000364 ORTHO05D000235 1.3e-07 61.2 260 26.2
Duzib116G0408 Durio zibethinus HOM05D000364 ORTHO05D000235 1.3e-07 61.2 77 39.0
Actinidia22518 Actinidia chinensis HOM05D000364 ORTHO05D000235 1.7e-07 60.8 72 43.1
Lalb_Chr23g0266521 Lupinus albus HOM05D000364 ORTHO05D000235 1.7e-07 60.8 71 45.1
Manes.05G155600 Manihot esculenta HOM05D000364 ORTHO05D000235 2.2e-07 60.5 407 23.6
DCAR_009965 Daucus carota HOM05D000364 ORTHO05D000235 2.9e-07 60.1 77 44.2
Dinv39450 Davidia involucrata HOM05D002183 ORTHO05D002169 5.0e-07 59.3 218 28.9
Gohir.D05G194700 Gossypium hirsutum HOM05D000364 ORTHO05D000235 5.0e-07 59.3 41 61.0
MBI10_g00759_MAGBIO Magnolia biondii HOM05D000364 ORTHO05D000235 5.0e-07 59.3 40 65.0
Gorai.009G199600 Gossypium raimondii HOM05D000364 ORTHO05D000235 6.5e-07 58.9 43 62.8
Prupe.1G375000 Prunus persica HOM05D000364 ORTHO05D000235 6.5e-07 58.9 82 39.0
ATR0585G074 Amborella trichopoda HOM05D000364 ORTHO05D000235 8.5e-07 58.5 51 51.0
Nn1g04892 Nelumbo nucifera HOM05D000364 ORTHO05D000235 8.5e-07 58.5 42 66.7
arahy.Tifrunner.gnm1.ann1.76HQPH Arachis hypogaea HOM05D000364 ORTHO05D000235 1.1e-06 58.2 41 65.9
arahy.Tifrunner.gnm1.ann1.VRQ703 Arachis hypogaea HOM05D000364 ORTHO05D000235 1.1e-06 58.2 41 65.9
Gohir.A05G191400 Gossypium hirsutum HOM05D000364 ORTHO05D000235 1.1e-06 58.2 41 58.5
HanXRQChr05g0151721 Helianthus annuus HOM05D000364 ORTHO05D000235 1.1e-06 58.2 37 70.3
Lsat_1_v5_gn_5_27000 Lactuca sativa HOM05D000364 ORTHO05D000235 1.1e-06 58.2 52 59.6
TWI56G0174 Tripterygium wilfordii HOM05D000364 ORTHO05D000235 1.1e-06 58.2 81 39.5
TAR625G0029 Trochodendron aralioides HOM05D000364 ORTHO05D000235 1.4e-06 57.8 78 43.6
Medtr3g112170 Medicago truncatula HOM05D000364 ORTHO05D000235 3.2e-06 56.6 69 46.4
TWI12G0935 Tripterygium wilfordii HOM05D000364 ORTHO05D000235 3.2e-06 56.6 79 38.0
Sed0022857 Sechium edule HOM05D000364 ORTHO05D000235 4.2e-06 56.2 43 58.1
ECA246G1050 Erigeron canadensis HOM05D000364 ORTHO05D000235 5.5e-06 55.8 69 44.9
Lalb_Chr11g0062231 Lupinus albus HOM05D000364 ORTHO05D000235 5.5e-06 55.8 62 53.2
CANSAT25G3631 Cannabis sativa HOM05D000364 ORTHO05D000235 7.2e-06 55.5 33 69.7
HanXRQChr04g0104021 Helianthus annuus HOM05D000364 ORTHO05D000235 7.2e-06 55.5 55 49.1


User provided reference genes

Program Settings