Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold201G41354 Striga asiatica HOM05D005869 ORTHO05D007229 4.9e-185 651.0 323 100.0
Migut.K01077 Erythranthe guttata HOM05D005869 ORTHO05D007229 2.3e-70 270.0 319 52.0
MSTRG.8047 Avicennia marina HOM05D005869 ORTHO05D007229 1.9e-67 260.4 328 48.8
PGSC0003DMG400014477 Solanum tuberosum HOM05D005869 ORTHO05D007229 1.1e-59 234.6 298 49.0
Oeu044507.2 Olea europaea HOM05D005869 ORTHO05D007229 1.4e-59 234.2 300 46.0
Nitab4.5_0002899g0010 Nicotiana tabacum HOM05D005869 ORTHO05D007229 7.8e-58 228.4 298 47.0
Sopen12g020650 Solanum pennellii HOM05D005869 ORTHO05D007229 1.0e-57 228.0 298 48.0
Solyc12g041880.2 Solanum lycopersicum HOM05D005869 ORTHO05D007229 3.9e-57 226.1 298 48.3
Peaxi162Scf00128g01773 Petunia axillaris HOM05D005869 ORTHO05D007229 5.1e-57 225.7 299 46.2
Potri.003G163800 Populus trichocarpa HOM05D005869 ORTHO05D007229 1.9e-56 223.8 289 47.4
GSVIVG01004938001 Vitis vinifera HOM05D005869 ORTHO05D007229 6.8e-54 215.3 305 43.3
Hma1.2p1_1834F.1_g304595 Hydrangea macrophylla HOM05D005869 ORTHO05D007229 2.0e-53 213.8 317 42.6
vmacro16076 Vaccinium macrocarpon HOM05D005869 ORTHO05D007229 2.0e-53 213.8 312 42.9
Sabra01G0045900 Salix brachista HOM05D005869 ORTHO05D007229 2.6e-53 213.4 302 44.4
Potri.001G066000 Populus trichocarpa HOM05D005869 ORTHO05D007229 9.9e-53 211.5 302 44.0
Thecc.02G194400 Theobroma cacao HOM05D005869 ORTHO05D007229 9.9e-53 211.5 294 43.5
Duzib052G0289 Durio zibethinus HOM05D005869 ORTHO05D007229 1.3e-52 211.1 294 42.5
Rhsim12G0098100 Rhododendron simsii HOM05D005869 ORTHO05D007229 1.7e-52 210.7 303 42.6
Duzib132G0160 Durio zibethinus HOM05D005869 ORTHO05D007229 2.9e-52 209.9 293 43.3
Ciclev10032244m.g Citrus clementina HOM05D005869 ORTHO05D007229 8.4e-52 208.4 300 43.3
Prupe.1G217100 Prunus persica HOM05D005869 ORTHO05D007229 8.4e-52 208.4 295 43.4
Oeu019435.1 Olea europaea HOM05D005869 ORTHO05D007229 1.4e-51 207.6 301 45.5
Manes.08G102300 Manihot esculenta HOM05D005869 ORTHO05D007229 4.1e-51 206.1 302 42.4
Cc11_g15130 Coffea canephora HOM05D005869 ORTHO05D007229 2.1e-50 203.8 289 45.0
Gohir.A03G152800 Gossypium hirsutum HOM05D005869 ORTHO05D007229 4.6e-50 202.6 294 43.2
CSS0039203 Camellia sinensis var. sinensis HOM05D005869 ORTHO05D007229 2.3e-49 200.3 302 41.7
Gohir.D02G175000 Gossypium hirsutum HOM05D005869 ORTHO05D007229 3.9e-49 199.5 294 42.2
Atru.chr11.2424 Acer truncatum HOM05D005869 ORTHO05D007229 6.6e-49 198.7 291 43.3
PSO478G4440 Papaver somniferum HOM05D005869 ORTHO05D007229 6.6e-49 198.7 294 42.2
CiPaw.05G102600 Carya illinoinensis HOM05D005869 ORTHO05D007229 8.7e-49 198.4 315 43.2
Gorai.005G196600 Gossypium raimondii HOM05D005869 ORTHO05D007229 1.5e-48 197.6 294 41.8
FvH4_4g22830 Fragaria vesca HOM05D005869 ORTHO05D007229 4.3e-48 196.1 301 41.9
Actinidia09599 Actinidia chinensis HOM05D005869 ORTHO05D007229 5.6e-48 195.7 297 42.4
Eucgr.B03550 Eucalyptus grandis HOM05D005869 ORTHO05D007229 5.6e-48 195.7 303 41.9
TAR622G0237 Trochodendron aralioides HOM05D005869 ORTHO05D007229 5.6e-48 195.7 299 42.5
RcHm_v2.0_Chr4g0429061 Rosa chinensis HOM05D005869 ORTHO05D007229 2.8e-47 193.4 302 41.1
TWI36G0175 Tripterygium wilfordii HOM05D005869 ORTHO05D007229 8.1e-47 191.8 300 41.0
Aa31sc1106G20 Aethionema arabicum HOM05D005869 ORTHO05D007229 1.8e-46 190.7 300 40.0
PSO017G3988 Papaver somniferum HOM05D005869 ORTHO05D007229 2.4e-46 190.3 302 41.1
BraA07t28937Z Brassica rapa HOM05D005869 ORTHO05D007229 4.0e-46 189.5 295 40.0
EL10Ac6g13596 Beta vulgaris HOM05D005869 ORTHO05D007229 5.2e-46 189.1 305 39.0
MD13G1129300 Malus domestica HOM05D005869 ORTHO05D007229 5.2e-46 189.1 301 41.9
BcaC06g35333 Brassica carinata HOM05D005869 ORTHO05D007229 6.9e-46 188.7 289 40.5
A07p11480 Brassica napus HOM05D005869 ORTHO05D007229 6.9e-46 188.7 292 40.1
CARHR027570 Cardamine hirsuta HOM05D005869 ORTHO05D007229 4.4e-45 186.0 289 39.1
BraA09t39308Z Brassica rapa HOM05D005869 ORTHO05D007229 5.8e-45 185.7 291 39.9
Carub.0001s2653 Capsella rubella HOM05D005869 ORTHO05D007229 7.6e-45 185.3 291 38.5
BcaC05g26814 Brassica carinata HOM05D005869 ORTHO05D007229 1.3e-44 184.5 302 39.4
BolC7t42232H Brassica oleracea HOM05D005869 ORTHO05D007229 1.7e-44 184.1 289 39.8
C05p26800 Brassica napus HOM05D005869 ORTHO05D007229 2.2e-44 183.7 292 39.4
Nn4g22166 Nelumbo nucifera HOM05D005869 ORTHO05D007229 2.2e-44 183.7 301 39.9
C07p17290 Brassica napus HOM05D005869 ORTHO05D007229 2.9e-44 183.3 286 39.9
MELO3C017808.2 Cucumis melo HOM05D005869 ORTHO05D007229 2.9e-44 183.3 298 40.3
Aqoxy5G03171 Aquilegia oxysepala HOM05D005869 ORTHO05D007229 4.9e-44 182.6 301 37.9
CsaV3_4G002340 Cucumis sativus L. HOM05D005869 ORTHO05D007229 4.9e-44 182.6 295 41.0
PGR102G3220 Punica granatum HOM05D005869 ORTHO05D007229 4.9e-44 182.6 302 40.1
Ah.03g135600 Amaranthus hybridus HOM05D005869 ORTHO05D007229 8.4e-44 181.8 304 38.2
BolC5t31401H Brassica oleracea HOM05D005869 ORTHO05D007229 8.4e-44 181.8 292 39.7
Thhalv10008411m.g Eutrema salsugineum HOM05D005869 ORTHO05D007229 8.4e-44 181.8 293 38.6
ClCG07G011870 Citrullus lanatus HOM05D005869 ORTHO05D007229 1.9e-43 180.6 298 38.9
ATR0829G022 Amborella trichopoda HOM05D005869 ORTHO05D007229 2.4e-43 180.3 302 38.7
MD16G1129300 Malus domestica HOM05D005869 ORTHO05D007229 3.2e-43 179.9 300 40.0
HanXRQChr08g0210441 Helianthus annuus HOM05D005869 ORTHO05D007229 5.4e-43 179.1 288 39.6
AL1G41620 Arabidopsis lyrata HOM05D005869 ORTHO05D007229 7.1e-43 178.7 291 37.5
AT1G28100 Arabidopsis thaliana HOM05D005869 ORTHO05D007229 7.1e-43 178.7 291 37.5
AUR62005704 Chenopodium quinoa HOM05D005869 ORTHO05D007229 7.1e-43 178.7 300 38.3
BcaB07g32415 Brassica carinata HOM05D005869 ORTHO05D007229 9.3e-43 178.3 291 37.5
Sed0007329 Sechium edule HOM05D005869 ORTHO05D007229 9.3e-43 178.3 299 39.1
A09p37960 Brassica napus HOM05D005869 ORTHO05D007229 1.2e-42 177.9 287 38.7
THA.LOC104820535 Tarenaya hassleriana HOM05D005869 ORTHO05D007229 1.2e-42 177.9 295 38.0
Lj6A836G36 Lonicera japonica HOM05D005869 ORTHO05D007229 3.5e-42 176.4 297 39.1
CDE05G0434 Ceratophyllum demersum HOM05D005869 ORTHO05D007229 1.0e-41 174.9 299 39.5
ECA233G2015 Erigeron canadensis HOM05D005869 ORTHO05D007229 2.3e-41 173.7 299 38.1
HPP92_000723 Vanilla planifolia HOM05D005869 ORTHO05D007229 3.9e-41 172.9 300 38.7
Sp1g24290 Schrenkiella parvula HOM05D005869 ORTHO05D007229 6.6e-41 172.2 295 37.3
arahy.Tifrunner.gnm1.ann1.WRPQ8T Arachis hypogaea HOM05D005869 ORTHO05D007229 3.3e-40 169.9 293 38.6
Zm00001eb044420 Zea mays HOM05D005869 ORTHO05D007229 4.3e-40 169.5 298 38.6
TPR.G35001 Trifolium pratense HOM05D005869 ORTHO05D007229 1.3e-39 167.9 303 39.3
Medtr2g072940 Medicago truncatula HOM05D005869 ORTHO05D007229 1.6e-39 167.5 311 38.3
arahy.Tifrunner.gnm1.ann1.3C70LE Arachis hypogaea HOM05D005869 ORTHO05D007229 2.1e-39 167.2 293 39.6
Lalb_Chr25g0285611 Lupinus albus HOM05D005869 ORTHO05D007229 6.2e-39 165.6 310 36.1
VMungo1080G1469 Vigna mungo HOM05D005869 ORTHO05D007229 1.1e-38 164.9 317 34.7
HanXRQChr08g0210391 Helianthus annuus HOM05D005869 ORTHO05D007229 1.4e-38 164.5 291 38.5
SalBow2G1918 Salvia bowleyana HOM05D005869 ORTHO05D007229 1.8e-38 164.1 320 36.6
SalBow7G3994 Salvia bowleyana HOM05D005869 ORTHO05D007229 3.1e-38 163.3 302 39.1
Nitab4.5_0000608g0060 Nicotiana tabacum HOM05D005869 ORTHO05D007229 4.0e-38 162.9 175 50.9
Phvul.005G075700 Phaseolus vulgaris HOM05D005869 ORTHO05D007229 6.9e-38 162.2 315 35.2
Glyma.13G264200 Glycine max HOM05D005869 ORTHO05D007229 1.2e-37 161.4 300 37.0
Psat1g007680 Pisum sativum HOM05D005869 ORTHO05D007229 1.5e-37 161.0 337 35.0
Lj3g0004461 Lotus japonicus HOM05D005869 ORTHO05D007229 2.6e-37 160.2 301 35.9
HanXRQChr12g0363371 Helianthus annuus HOM05D005869 ORTHO05D007229 5.8e-37 159.1 302 37.4
Pp3c14_12070 Physcomitrium patens HOM05D005869 ORTHO05D007229 1.9e-35 154.1 289 37.0
CANSAT01G1948 Cannabis sativa HOM05D005869 ORTHO05D007229 7.9e-34 148.7 268 35.8
Manes.09G187100 Manihot esculenta HOM05D005869 ORTHO05D007229 2.3e-33 147.1 228 41.2
Dinv19137 Davidia involucrata HOM05D005869 ORTHO05D007229 6.7e-33 145.6 179 46.4
Mapoly0153s0008 Marchantia polymorpha HOM05D005869 ORTHO05D007229 3.3e-32 143.3 285 34.4
Haze_12488 Corylus avellana HOM05D005869 ORTHO05D007229 2.8e-31 140.2 281 40.2
AagrBONN_evm.TU.Sc2ySwM_368.1764 Anthoceros agrestis HOM05D005869 ORTHO05D007229 1.1e-30 138.3 284 34.5
Sed0028093 Sechium edule HOM05D005869 ORTHO05D007229 3.4e-29 133.3 298 35.6
MBI11_g11870_MAGBIO Magnolia biondii HOM05D000422 ORTHO05D001248 5.8e-29 132.5 327 31.8
QL03p049770 Quercus lobata HOM05D005869 ORTHO05D007229 5.5e-27 125.9 117 54.7
COL.COLO4_06415 Corchorus olitorius HOM05D005869 ORTHO05D007229 7.1e-27 125.6 151 44.4
Lsat_1_v5_gn_4_151180 Lactuca sativa HOM05D005869 ORTHO05D007229 1.2e-26 124.8 261 36.4
Hund16126 Selenicereus undatus HOM05D005869 ORTHO05D007229 1.2e-26 124.8 182 39.0
Migut.K01075 Erythranthe guttata HOM05D005869 ORTHO05D007229 2.7e-26 123.6 298 32.2
FAN12G1770 Fragaria x ananassa HOM05D000001 ORTHO05D010470 3.5e-26 123.2 298 33.6
MCO09G131 Micromonas commoda HOM05D005869 ORTHO05D007229 2.3e-25 120.6 301 32.2
FAN07G2435 Fragaria x ananassa HOM05D000001 ORTHO05D010470 3.0e-25 120.2 298 33.6
Sc04g0000090 Simmondsia chinensis HOM05D005869 ORTHO05D007229 1.9e-24 117.5 149 46.3
Sc04g0000050 Simmondsia chinensis HOM05D005869 ORTHO05D007229 2.5e-24 117.1 150 46.0
FAN17G1058 Fragaria x ananassa HOM05D000001 ORTHO05D010470 2.1e-23 114.0 298 33.2
Migut.K01074 Erythranthe guttata HOM05D005869 ORTHO05D007229 3.7e-23 113.2 195 41.5
MSTRG.8048 Avicennia marina HOM05D005869 ORTHO05D007229 2.4e-22 110.5 294 32.3
Sabra03G0119100 Salix brachista HOM05D005869 ORTHO05D007229 3.1e-22 110.2 179 39.7
Cpa.g.sc498.3 Carica papaya HOM05D005869 ORTHO05D007229 4.9e-20 102.8 182 39.0
Ca_03922_v3 Cicer arietinum L. HOM05D005869 ORTHO05D007229 1.6e-18 97.8 161 38.5
Cre03.g194450 Chlamydomonas reinhardtii HOM05D005869 ORTHO05D007229 6.0e-18 95.9 281 29.5
QL03p049767 Quercus lobata HOM05D005869 ORTHO05D007229 6.0e-18 95.9 179 38.5
Migut.O00624 Erythranthe guttata HOM05D005869 ORTHO05D007229 1.0e-17 95.1 239 32.2
unitig_26.g10430 Utricularia gibba HOM05D005869 ORTHO05D007229 1.8e-17 94.4 154 39.6
Hund16125 Selenicereus undatus HOM05D005869 ORTHO05D007229 2.3e-17 94.0 60 78.3
Sc04g0000040 Simmondsia chinensis HOM05D005869 ORTHO05D007229 3.9e-17 93.2 79 60.8
Sc04g0000100 Simmondsia chinensis HOM05D005869 ORTHO05D007229 3.9e-17 93.2 79 60.8
BcaB03g13954 Brassica carinata HOM05D005869 ORTHO05D007229 6.7e-17 92.4 182 34.1
PRCOL_00000815 Prasinoderma coloniale HOM05D005869 ORTHO05D007229 1.1e-16 91.7 290 26.6
BcaC05g26813 Brassica carinata HOM05D005869 ORTHO05D007229 3.7e-15 86.7 78 56.4
Os10g0499600 Oryza sativa ssp. japonica HOM05D005869 ORTHO05D007229 1.1e-14 85.1 83 53.0
SMO115G0111 Selaginella moellendorffii HOM05D005869 ORTHO05D007229 4.1e-14 83.2 53 75.5
CBR_g3946 Chara braunii HOM05D005869 ORTHO05D007229 2.9e-12 77.0 287 27.5
Migut.K01072 Erythranthe guttata HOM05D005869 ORTHO05D007229 2.5e-11 73.9 53 60.4
Migut.K01073 Erythranthe guttata HOM05D005869 ORTHO05D007229 1.8e-09 67.8 107 36.4
Pp3c14_11090 Physcomitrium patens HOM05D005869 ORTHO05D007229 2.3e-09 67.4 95 42.1
Migut.K01076 Erythranthe guttata HOM05D005869 ORTHO05D007229 3.3e-08 63.5 52 53.8
arahy.Tifrunner.gnm1.ann1.6GV0UE Arachis hypogaea HOM05D001662 ORTHO05D005318 2.2e-07 60.8 54 57.4


User provided reference genes

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