Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold201G41349 Striga asiatica HOM05D000272 ORTHO05D405395 7.7e-211 736.9 367 100.0
Migut.C00771 Erythranthe guttata HOM05D000272 ORTHO05D000164 5.8e-25 119.4 508 29.1
Cc10_g02400 Coffea canephora HOM05D000272 ORTHO05D000164 5.8e-17 92.8 234 35.0
Oeu030602.1 Olea europaea HOM05D000272 ORTHO05D000164 5.4e-15 86.3 198 36.9
CAN.G851.41 Capsicum annuum HOM05D000272 ORTHO05D000164 7.9e-14 82.4 199 36.2
Dinv31790 Davidia involucrata HOM05D000272 ORTHO05D000164 1.0e-13 82.0 185 36.8
Sc15g0007170 Simmondsia chinensis HOM05D000272 ORTHO05D000164 5.1e-13 79.7 208 32.2
Peaxi162Scf00189g00919 Petunia axillaris HOM05D000272 ORTHO05D000164 8.7e-13 79.0 235 33.6
Solyc04g080790.3 Solanum lycopersicum HOM05D000272 ORTHO05D000164 8.7e-13 79.0 194 36.6
Sopen04g034380 Solanum pennellii HOM05D000272 ORTHO05D000164 2.5e-12 77.4 194 36.1
PGSC0003DMG400003751 Solanum tuberosum HOM05D000272 ORTHO05D000164 3.3e-12 77.0 195 35.4
Hund17198 Selenicereus undatus HOM05D000272 ORTHO05D000164 2.1e-11 74.3 216 31.0
Hma1.2p1_0851F.1_g228360 Hydrangea macrophylla HOM05D000272 ORTHO05D000164 1.1e-10 72.0 177 35.6
Nitab4.5_0005779g0040 Nicotiana tabacum HOM05D000272 ORTHO05D000164 1.1e-10 72.0 190 34.2
Nitab4.5_0001861g0090 Nicotiana tabacum HOM05D000272 ORTHO05D000164 2.4e-10 70.9 190 33.7
Potri.004G159300 Populus trichocarpa HOM05D000272 ORTHO05D000164 4.0e-10 70.1 218 31.2
unitig_578.g16080 Utricularia gibba HOM05D000272 ORTHO05D000164 6.9e-10 69.3 187 31.6
DCAR_028962 Daucus carota HOM05D000272 ORTHO05D000164 9.0e-10 68.9 145 31.7
Actinidia00557 Actinidia chinensis HOM05D000272 ORTHO05D000164 1.2e-09 68.6 93 47.3
CSS0025920 Camellia sinensis var. sinensis HOM05D000272 ORTHO05D000164 4.5e-09 66.6 153 32.7
CSS0040879 Camellia sinensis var. sinensis HOM05D000272 ORTHO05D000164 4.5e-09 66.6 153 32.7
Cpa.g.sc1426.1 Carica papaya HOM05D000272 ORTHO05D000164 4.5e-09 66.6 206 32.0
Actinidia11755 Actinidia chinensis HOM05D000272 ORTHO05D000164 7.6e-09 65.9 93 47.3
Manes.11G082400 Manihot esculenta HOM05D000272 ORTHO05D000164 7.6e-09 65.9 207 33.8
Duzib132G1260 Durio zibethinus HOM05D000272 ORTHO05D000164 9.9e-09 65.5 146 37.0
MD08G1024200 Malus domestica HOM05D000272 ORTHO05D000164 9.9e-09 65.5 201 31.8
unitig_8.g4925 Utricularia gibba HOM05D000272 ORTHO05D000164 9.9e-09 65.5 159 34.0
CiPaw.05G070400 Carya illinoinensis HOM05D000272 ORTHO05D000164 1.7e-08 64.7 227 30.8
TWI31G1132 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 1.7e-08 64.7 116 37.1
Eucgr.G01703 Eucalyptus grandis HOM05D000272 ORTHO05D000164 2.9e-08 63.9 180 32.8
Atru.chr5.3087 Acer truncatum HOM05D000272 ORTHO05D000164 3.8e-08 63.5 148 33.1
Ah.05g180880 Amaranthus hybridus HOM05D000272 ORTHO05D000164 3.8e-08 63.5 211 28.4
Oeu030416.3 Olea europaea HOM05D000272 ORTHO05D000164 3.8e-08 63.5 225 32.0
Hund26888 Selenicereus undatus HOM05D000272 ORTHO05D000164 3.8e-08 63.5 206 29.6
MSTRG.16830 Avicennia marina HOM05D000272 ORTHO05D000164 4.9e-08 63.2 176 33.5
Lj9A377T92 Lonicera japonica HOM05D000272 ORTHO05D000164 4.9e-08 63.2 162 35.2
Thecc.08G034200 Theobroma cacao HOM05D000272 ORTHO05D000164 6.4e-08 62.8 142 32.4
CAN.G1544.12 Capsicum annuum HOM05D000272 ORTHO05D000164 8.4e-08 62.4 153 36.6
Gohir.A13G031900 Gossypium hirsutum HOM05D000272 ORTHO05D000164 8.4e-08 62.4 98 42.9
Gohir.D13G030400 Gossypium hirsutum HOM05D000272 ORTHO05D000164 8.4e-08 62.4 98 42.9
Gorai.013G034600 Gossypium raimondii HOM05D000272 ORTHO05D000164 8.4e-08 62.4 98 42.9
Rhsim11G0180900 Rhododendron simsii HOM05D000272 ORTHO05D000164 8.4e-08 62.4 113 38.9
HanXRQChr04g0099161 Helianthus annuus HOM05D000272 ORTHO05D000164 1.1e-07 62.0 194 28.4
HanXRQChr09g0269511 Helianthus annuus HOM05D000272 ORTHO05D000164 1.1e-07 62.0 203 30.0
SalBow6G0211 Salvia bowleyana HOM05D000272 ORTHO05D000164 1.1e-07 62.0 216 31.9
Duzib248G0111 Durio zibethinus HOM05D000272 ORTHO05D000164 1.4e-07 61.6 96 42.7
FAN27G1397 Fragaria x ananassa HOM05D000272 ORTHO05D000164 1.4e-07 61.6 194 32.0
Gohir.A03G197100 Gossypium hirsutum HOM05D000272 ORTHO05D000164 1.4e-07 61.6 200 32.0
Lsat_1_v5_gn_4_116561 Lactuca sativa HOM05D000272 ORTHO05D000164 1.4e-07 61.6 196 32.1
Potri.009G120800 Populus trichocarpa HOM05D000272 ORTHO05D000164 1.4e-07 61.6 184 31.0
Actinidia07276 Actinidia chinensis HOM05D000272 ORTHO05D000164 1.9e-07 61.2 166 32.5
CSS0000078 Camellia sinensis var. sinensis HOM05D000272 ORTHO05D000164 1.9e-07 61.2 186 34.4
CSS0047451 Camellia sinensis var. sinensis HOM05D000272 ORTHO05D000164 1.9e-07 61.2 186 34.4
MD15G1021800 Malus domestica HOM05D000272 ORTHO05D000164 1.9e-07 61.2 202 29.2
Thecc.02G079800 Theobroma cacao HOM05D000272 ORTHO05D000164 1.9e-07 61.2 145 34.5
vmacro02075 Vaccinium macrocarpon HOM05D000272 ORTHO05D000164 1.9e-07 61.2 173 32.9
Cfa005061 Carpinus fangiana HOM05D000272 ORTHO05D000164 2.4e-07 60.8 191 31.9
Cc02_g17190 Coffea canephora HOM05D000272 ORTHO05D000164 2.4e-07 60.8 149 33.6
COL.COLO4_25998 Corchorus olitorius HOM05D000272 ORTHO05D000164 2.4e-07 60.8 190 32.1
FvH4_2g39260 Fragaria vesca HOM05D000272 ORTHO05D000164 2.4e-07 60.8 200 31.5
Nn1g05793 Nelumbo nucifera HOM05D000272 ORTHO05D000164 2.4e-07 60.8 215 28.8
RcHm_v2.0_Chr6g0266111 Rosa chinensis HOM05D000272 ORTHO05D000164 2.4e-07 60.8 194 31.4
Sabra04G0106600 Salix brachista HOM05D000272 ORTHO05D000164 2.4e-07 60.8 185 32.4
Sopen01g052170 Solanum pennellii HOM05D000272 ORTHO05D000164 2.4e-07 60.8 148 35.8
TAR376G0859 Trochodendron aralioides HOM05D000272 ORTHO05D000164 2.4e-07 60.8 186 31.2
Actinidia24253 Actinidia chinensis HOM05D000272 ORTHO05D000164 3.2e-07 60.5 95 37.9
Duzib093G0595 Durio zibethinus HOM05D000272 ORTHO05D000164 3.2e-07 60.5 85 43.5
FAN20G0214 Fragaria x ananassa HOM05D000272 ORTHO05D000164 3.2e-07 60.5 200 31.5
FAN27G1949 Fragaria x ananassa HOM05D000272 ORTHO05D000164 3.2e-07 60.5 200 32.0
Gohir.D02G218500 Gossypium hirsutum HOM05D000272 ORTHO05D000164 3.2e-07 60.5 140 35.7
Gorai.005G246400 Gossypium raimondii HOM05D000272 ORTHO05D000164 3.2e-07 60.5 140 35.7
Solyc01g109980.4 Solanum lycopersicum HOM05D000272 ORTHO05D000164 3.2e-07 60.5 148 35.8
GSVIVG01024224001 Vitis vinifera HOM05D000272 ORTHO05D000164 3.2e-07 60.5 85 43.5
CiPaw.06G132200 Carya illinoinensis HOM05D000272 ORTHO05D000164 4.2e-07 60.1 179 30.7
AUR62014471 Chenopodium quinoa HOM05D000272 ORTHO05D000164 4.2e-07 60.1 224 25.9
AUR62034527 Chenopodium quinoa HOM05D000272 ORTHO05D000164 4.2e-07 60.1 224 26.8
ATR0665G049 Amborella trichopoda HOM05D000272 ORTHO05D000164 5.5e-07 59.7 123 37.4
Gohir.D12G030200 Gossypium hirsutum HOM05D000272 ORTHO05D000164 5.5e-07 59.7 146 33.6
PGR042G2700 Punica granatum HOM05D000272 ORTHO05D000164 5.5e-07 59.7 99 41.4
Lj5A193T98 Lonicera japonica HOM05D000272 ORTHO05D000164 7.1e-07 59.3 197 31.0
Sabra09G0093100 Salix brachista HOM05D000272 ORTHO05D000164 7.1e-07 59.3 218 30.3
THA.LOC104819622 Tarenaya hassleriana HOM05D000272 ORTHO05D000164 7.1e-07 59.3 175 33.7
TWI56G1444 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 7.1e-07 59.3 231 31.2
EL10Ac1g00603 Beta vulgaris HOM05D000272 ORTHO05D000164 9.3e-07 58.9 225 26.2
BraA03t15378Z Brassica rapa HOM05D000272 ORTHO05D000164 9.3e-07 58.9 102 40.2
Dinv42033 Davidia involucrata HOM05D000272 ORTHO05D000164 9.3e-07 58.9 123 38.2
ECA247G1806 Erigeron canadensis HOM05D000272 ORTHO05D000164 9.3e-07 58.9 117 35.9
FAN15G1255 Fragaria x ananassa HOM05D000272 ORTHO05D000164 9.3e-07 58.9 197 31.5
Lsat_1_v5_gn_9_107800 Lactuca sativa HOM05D000272 ORTHO05D000164 9.3e-07 58.9 119 34.5
BcaNung07068 Brassica carinata HOM05D000272 ORTHO05D000164 1.2e-06 58.5 97 41.2
Ciclev10027952m.g Citrus clementina HOM05D000272 ORTHO05D000164 1.2e-06 58.5 148 31.8
COL.COLO4_26237 Corchorus olitorius HOM05D000272 ORTHO05D000164 1.2e-06 58.5 88 37.5
FvH4_2g09770 Fragaria vesca HOM05D000272 ORTHO05D000164 1.2e-06 58.5 194 31.4
FAN24G2720 Fragaria x ananassa HOM05D000272 ORTHO05D000164 1.2e-06 58.5 194 31.4
FAN26G1150 Fragaria x ananassa HOM05D000272 ORTHO05D000164 1.2e-06 58.5 197 31.5
HanXRQChr03g0069411 Helianthus annuus HOM05D000272 ORTHO05D000164 1.2e-06 58.5 178 30.9
Prupe.8G089800 Prunus persica HOM05D000272 ORTHO05D000164 1.2e-06 58.5 185 34.6
Duzib052G0773 Durio zibethinus HOM05D000272 ORTHO05D000164 1.6e-06 58.2 204 32.8
QL11p045337 Quercus lobata HOM05D000272 ORTHO05D000164 1.6e-06 58.2 191 32.5
Sed0008730 Sechium edule HOM05D000272 ORTHO05D000164 1.6e-06 58.2 183 31.1
arahy.Tifrunner.gnm1.ann1.71RKEA Arachis hypogaea HOM05D000272 ORTHO05D000164 2.1e-06 57.8 143 30.8
arahy.Tifrunner.gnm1.ann1.U21TUP Arachis hypogaea HOM05D000272 ORTHO05D000164 2.1e-06 57.8 143 30.8
ECA240G0638 Erigeron canadensis HOM05D000272 ORTHO05D000164 2.1e-06 57.8 173 31.8
PSO675G1668 Papaver somniferum HOM05D000272 ORTHO05D000164 2.1e-06 57.8 98 37.8
RcHm_v2.0_Chr6g0301751 Rosa chinensis HOM05D000272 ORTHO05D000164 2.1e-06 57.8 194 31.4
arahy.Tifrunner.gnm1.ann1.ZRTB0J Arachis hypogaea HOM05D000272 ORTHO05D000164 2.7e-06 57.4 97 40.2
FAN15G3460 Fragaria x ananassa HOM05D000272 ORTHO05D000164 2.7e-06 57.4 194 31.4
HanXRQChr16g0501441 Helianthus annuus HOM05D000272 ORTHO05D000164 2.7e-06 57.4 179 29.1
Lj4A33T84 Lonicera japonica HOM05D000272 ORTHO05D000164 2.7e-06 57.4 186 30.1
Solyc11g068950.3 Solanum lycopersicum HOM05D000272 ORTHO05D000164 2.7e-06 57.4 168 32.7
Haze_02321 Corylus avellana HOM05D000272 ORTHO05D000164 3.5e-06 57.0 182 33.0
Oeu003743.1 Olea europaea HOM05D000272 ORTHO05D000164 3.5e-06 57.0 96 38.5
Peaxi162Scf00016g00423 Petunia axillaris HOM05D000272 ORTHO05D000164 3.5e-06 57.0 152 33.6
vmacro21684 Vaccinium macrocarpon HOM05D000272 ORTHO05D000164 3.5e-06 57.0 100 39.0
Duzib116G0523 Durio zibethinus HOM05D000272 ORTHO05D000164 4.6e-06 56.6 225 27.1
FAN20G1287 Fragaria x ananassa HOM05D000272 ORTHO05D000164 4.6e-06 56.6 194 30.4
Psat0s189g0080 Pisum sativum HOM05D000272 ORTHO05D000164 4.6e-06 56.6 119 34.5
Aqoxy6G01202 Aquilegia oxysepala HOM05D000272 ORTHO05D000164 6.0e-06 56.2 104 38.5
Eucgr.I01293 Eucalyptus grandis HOM05D000272 ORTHO05D000164 6.0e-06 56.2 173 30.1
PSO541G5161 Papaver somniferum HOM05D000272 ORTHO05D000164 6.0e-06 56.2 98 35.7
SGA_v2.0_scaffold31G12859 Striga asiatica HOM05D000272 ORTHO05D000164 6.0e-06 56.2 90 41.1
Thecc.05G105000 Theobroma cacao HOM05D000272 ORTHO05D000164 6.0e-06 56.2 115 35.7
Haze_20180 Corylus avellana HOM05D000272 ORTHO05D000164 7.9e-06 55.8 169 30.8
Dinv23484 Davidia involucrata HOM05D000272 ORTHO05D000164 7.9e-06 55.8 100 40.0
MBI11_g07620_MAGBIO Magnolia biondii HOM05D000272 ORTHO05D000164 7.9e-06 55.8 193 29.5
QL02p010174 Quercus lobata HOM05D000272 ORTHO05D000164 7.9e-06 55.8 202 30.7
Sopen11g027660 Solanum pennellii HOM05D000272 ORTHO05D000164 7.9e-06 55.8 168 32.1
HPP92_004393 Vanilla planifolia HOM05D000272 ORTHO05D000164 7.9e-06 55.8 96 37.5


User provided reference genes

Program Settings