Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00715 Striga asiatica HOM05D000347 ORTHO05D008062 6.9e-145 517.3 264 100.0
Migut.D00520 Erythranthe guttata HOM05D000347 ORTHO05D008062 5.0e-71 271.9 295 58.3
MSTRG.21431 Avicennia marina HOM05D000347 ORTHO05D008062 7.3e-70 268.1 281 58.4
Cc01_g17250 Coffea canephora HOM05D000347 ORTHO05D008062 2.0e-59 233.4 292 52.4
Dinv19218 Davidia involucrata HOM05D000347 ORTHO05D008062 4.0e-52 209.1 285 48.4
GSVIVG01028561001 Vitis vinifera HOM05D000347 ORTHO05D008062 1.1e-49 201.1 266 52.3
FvH4_2g19360 Fragaria vesca HOM05D000347 ORTHO05D008062 6.0e-48 195.3 292 47.9
Prupe.8G205000 Prunus persica HOM05D000347 ORTHO05D000694 1.0e-47 194.5 235 51.1
FAN15G1475 Fragaria x ananassa HOM05D000347 ORTHO05D000694 1.3e-47 194.1 291 47.4
Phvul.008G123300 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 2.3e-47 193.4 290 44.8
RcHm_v2.0_Chr6g0285151 Rosa chinensis HOM05D000347 ORTHO05D008062 2.3e-47 193.4 290 48.6
Thecc.01G228300 Theobroma cacao HOM05D000347 ORTHO05D008062 6.6e-47 191.8 284 47.2
Glyma.08G356200 Glycine max HOM05D000347 ORTHO05D008062 3.3e-46 189.5 289 43.3
CiPaw.04G106800 Carya illinoinensis HOM05D000347 ORTHO05D000694 9.6e-46 188.0 281 44.1
SalBow4G1846 Salvia bowleyana HOM05D000347 ORTHO05D008062 1.6e-45 187.2 171 64.3
Manes.12G042000 Manihot esculenta HOM05D000347 ORTHO05D008062 3.6e-45 186.0 286 47.2
MD10G1166700 Malus domestica HOM05D000347 ORTHO05D008062 4.7e-45 185.7 292 45.5
Eucgr.H00807 Eucalyptus grandis HOM05D000347 ORTHO05D008062 6.2e-45 185.3 288 43.1
FAN24G2098 Fragaria x ananassa HOM05D000347 ORTHO05D000694 1.4e-44 184.1 210 57.1
FAN27G2014 Fragaria x ananassa HOM05D000347 ORTHO05D008062 1.4e-44 184.1 286 46.9
QL09p044668 Quercus lobata HOM05D000347 ORTHO05D008062 2.4e-44 183.3 184 58.2
MD05G1178500 Malus domestica HOM05D000347 ORTHO05D008062 6.8e-44 181.8 291 44.3
Glyma.18G173300 Glycine max HOM05D000347 ORTHO05D008062 8.9e-44 181.4 292 43.2
TWI18G0408 Tripterygium wilfordii HOM05D000347 ORTHO05D008062 8.9e-44 181.4 327 41.3
CSS0034279 Camellia sinensis var. sinensis HOM05D000347 ORTHO05D008062 1.5e-43 180.6 183 55.7
Gohir.D11G142500 Gossypium hirsutum HOM05D000347 ORTHO05D008062 2.0e-43 180.3 280 46.4
Nitab4.5_0000866g0010 Nicotiana tabacum HOM05D000347 ORTHO05D008062 2.0e-43 180.3 280 45.7
Gorai.007G152800 Gossypium raimondii HOM05D000347 ORTHO05D008062 2.2e-42 176.8 278 46.4
VMungo1383G0854 Vigna mungo HOM05D000347 ORTHO05D008062 3.8e-42 176.0 285 43.9
Actinidia37581 Actinidia chinensis HOM05D000347 ORTHO05D008062 4.9e-42 175.6 182 57.1
Potri.002G240300 Populus trichocarpa HOM05D000347 ORTHO05D008062 6.4e-42 175.3 276 45.3
Gohir.A11G136100 Gossypium hirsutum HOM05D000347 ORTHO05D008062 8.4e-42 174.9 279 47.0
Hma1.2p1_0351F.1_g132820 Hydrangea macrophylla HOM05D000347 ORTHO05D008062 8.4e-42 174.9 277 41.9
Actinidia23733 Actinidia chinensis HOM05D000347 ORTHO05D008062 1.1e-41 174.5 279 45.9
Ciclev10021356m.g Citrus clementina HOM05D000347 ORTHO05D008062 1.4e-41 174.1 300 42.3
PGR083G0949 Punica granatum HOM05D000347 ORTHO05D008062 1.6e-40 170.6 282 44.3
Lj1g0023077 Lotus japonicus HOM05D000347 ORTHO05D008062 2.1e-40 170.2 279 41.9
TAR636G2566 Trochodendron aralioides HOM05D000347 ORTHO05D008062 2.7e-40 169.9 295 41.0
Oeu018505.1 Olea europaea HOM05D000879 ORTHO05D002043 3.0e-39 166.4 169 54.4
Nn1g07779 Nelumbo nucifera HOM05D000347 ORTHO05D008062 1.5e-38 164.1 295 40.0
TAR365G0021 Trochodendron aralioides HOM05D000347 ORTHO05D008062 3.3e-38 162.9 297 40.7
Solyc09g061715.1 Solanum lycopersicum HOM05D000347 ORTHO05D008062 5.6e-38 162.2 281 42.7
Sopen09g024710 Solanum pennellii HOM05D000347 ORTHO05D008062 5.6e-38 162.2 281 42.7
Medtr0027s0180 Medicago truncatula HOM05D000347 ORTHO05D008062 2.8e-37 159.8 206 50.0
Actinidia30090 Actinidia chinensis HOM05D000347 ORTHO05D008062 8.1e-37 158.3 182 53.8
CANSAT01G0926 Cannabis sativa HOM05D000347 ORTHO05D008062 4.0e-36 156.0 307 41.4
Sabra02G0183100 Salix brachista HOM05D000347 ORTHO05D008062 4.0e-36 156.0 201 49.3
TAR365G1261 Trochodendron aralioides HOM05D000347 ORTHO05D008062 4.0e-36 156.0 308 37.0
Sopen06g034940 Solanum pennellii HOM05D000347 ORTHO05D008062 5.3e-36 155.6 281 39.1
Solyc06g083560.3 Solanum lycopersicum HOM05D000347 ORTHO05D008062 6.9e-36 155.2 282 39.0
CiPaw.03G151400 Carya illinoinensis HOM05D000347 ORTHO05D008062 2.6e-35 153.3 183 50.8
Ca_07542_v3 Cicer arietinum L. HOM05D000347 ORTHO05D008062 4.5e-35 152.5 184 47.3
Rhsim13G0044000 Rhododendron simsii HOM05D000347 ORTHO05D008062 5.8e-35 152.1 181 55.8
Lalb_Chr03g0041901 Lupinus albus HOM05D000347 ORTHO05D008062 1.3e-34 151.0 227 47.6
PGSC0003DMG400020089 Solanum tuberosum HOM05D007853 ORTHO05D009873 1.3e-34 151.0 280 38.9
Medtr7g059080 Medicago truncatula HOM05D000347 ORTHO05D008062 1.7e-34 150.6 174 51.1
Cpa.g.sc8.175 Carica papaya HOM05D000347 ORTHO05D008062 7.1e-33 145.2 298 38.6
HanXRQChr01g0014681 Helianthus annuus HOM05D000347 ORTHO05D008062 1.2e-32 144.4 185 51.4
Aqoxy2G03776 Aquilegia oxysepala HOM05D000347 ORTHO05D008062 2.7e-32 143.3 239 43.9
TPR.G15284 Trifolium pratense HOM05D000347 ORTHO05D008062 4.6e-32 142.5 278 39.2
Psat3g142320 Pisum sativum HOM05D000347 ORTHO05D008062 6.0e-32 142.1 283 39.9
CsaV3_3G028770 Cucumis sativus L. HOM05D000347 ORTHO05D008062 2.3e-31 140.2 288 39.2
Lalb_Chr01g0022451 Lupinus albus HOM05D000347 ORTHO05D008062 3.6e-29 132.9 280 41.1
PGSC0003DMG400003422 Solanum tuberosum HOM05D000347 ORTHO05D008062 3.6e-29 132.9 177 48.6
Nitab4.5_0003790g0070 Nicotiana tabacum HOM05D000347 ORTHO05D008062 1.1e-28 131.3 113 61.9
MELO3C018065.2 Cucumis melo HOM05D000347 ORTHO05D008062 2.4e-28 130.2 181 47.5
Sed0024927 Sechium edule HOM05D000901 ORTHO05D008062 2.4e-28 130.2 290 38.3
vmacro02746 Vaccinium macrocarpon HOM05D000347 ORTHO05D008062 4.0e-28 129.4 171 51.5
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 3.4e-27 126.3 284 37.7
Lsat_1_v5_gn_5_179760 Lactuca sativa HOM05D000347 ORTHO05D008062 1.7e-26 124.0 177 46.9
Glyma.16G094000 Glycine max HOM05D000347 ORTHO05D008062 1.4e-25 120.9 281 33.5
arahy.Tifrunner.gnm1.ann1.W0YDFD Arachis hypogaea HOM05D000347 ORTHO05D008062 1.9e-25 120.6 291 36.4
AUR62031831 Chenopodium quinoa HOM05D000347 ORTHO05D008062 1.2e-24 117.9 195 44.6
Peaxi162Scf02141g00004 Petunia axillaris HOM05D000347 ORTHO05D008062 1.2e-24 117.9 186 46.2
Sc05g0002410 Simmondsia chinensis HOM05D000347 ORTHO05D008062 6.0e-24 115.5 288 36.8
SGA_v2.0_scaffold8G04652 Striga asiatica HOM05D005470 ORTHO05D006855 2.3e-23 113.6 130 56.9
arahy.Tifrunner.gnm1.ann1.54FW37 Arachis hypogaea HOM05D000347 ORTHO05D008062 3.0e-23 113.2 242 38.4
Gohir.D08G211800 Gossypium hirsutum HOM05D000347 ORTHO05D008062 5.1e-23 112.5 286 35.7
Sed0024241 Sechium edule HOM05D000347 ORTHO05D008062 5.1e-23 112.5 204 41.2
Gohir.A08G194000 Gossypium hirsutum HOM05D000347 ORTHO05D008062 2.5e-22 110.2 287 34.5
Gorai.004G225100 Gossypium raimondii HOM05D000347 ORTHO05D008062 2.5e-22 110.2 285 35.4
Lj3g0009150 Lotus japonicus HOM05D000347 ORTHO05D008062 3.3e-22 109.8 160 43.8
Peaxi162Scf00517g00428 Petunia axillaris HOM05D000347 ORTHO05D008062 5.6e-22 109.0 242 35.1
DCAR_018551 Daucus carota HOM05D000347 ORTHO05D008062 4.8e-21 105.9 264 33.7
Ah.08g214040 Amaranthus hybridus HOM05D000901 ORTHO05D008062 1.4e-20 104.4 262 35.9
DCAR_004713 Daucus carota HOM05D000347 ORTHO05D008062 5.3e-20 102.4 156 43.6
Haze_24776 Corylus avellana HOM05D000347 ORTHO05D008062 1.5e-19 100.9 203 37.4
Atru.chr5.2056 Acer truncatum HOM05D000347 ORTHO05D008062 6.5e-18 95.5 112 47.3
AUR62008877 Chenopodium quinoa HOM05D000347 ORTHO05D008062 2.5e-17 93.6 168 39.9
Nitab4.5_0002085g0080 Nicotiana tabacum HOM05D000347 ORTHO05D008062 2.5e-17 93.6 246 32.1
VMungo0331G1006 Vigna mungo HOM05D000347 ORTHO05D008062 1.6e-16 90.9 276 31.2
THA.LOC104821644 Tarenaya hassleriana HOM05D000347 ORTHO05D008062 4.6e-16 89.4 172 39.5
SalBow2G2623 Salvia bowleyana HOM05D000347 ORTHO05D008062 2.3e-15 87.0 281 31.7
Phvul.010G019000 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 3.0e-15 86.7 206 37.4
Sc24g0003600 Simmondsia chinensis HOM05D000347 ORTHO05D008062 5.1e-15 85.9 171 37.4
AL3G40480 Arabidopsis lyrata HOM05D011699 ORTHO05D008062 8.7e-15 85.1 279 34.4
Carub.0003s2514 Capsella rubella HOM05D011699 ORTHO05D008062 7.4e-14 82.0 211 38.4
MBI07_g21075_MAGBIO Magnolia biondii HOM05D000347 ORTHO05D008062 1.6e-13 80.9 191 36.6
Oeu058867.1 Olea europaea HOM05D000347 ORTHO05D008062 1.6e-13 80.9 79 54.4
Thhalv10002691m.g Eutrema salsugineum HOM05D011699 ORTHO05D008062 1.1e-12 78.2 138 42.8
Nn3g19918 Nelumbo nucifera HOM05D000347 ORTHO05D008062 1.1e-12 78.2 180 31.7
AT3G24750 Arabidopsis thaliana HOM05D011699 ORTHO05D008062 6.9e-12 75.5 188 38.3
Phvul.010G019300 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 9.0e-12 75.1 277 29.2
Medtr0027s0200 Medicago truncatula HOM05D000347 ORTHO05D008062 1.2e-11 74.7 184 34.2
A07p07520 Brassica napus HOM05D011699 ORTHO05D008062 5.9e-11 72.4 190 33.7
BraA07t28543Z Brassica rapa HOM05D011699 ORTHO05D008062 5.9e-11 72.4 190 33.7
unitig_8.g3754 Utricularia gibba HOM05D004922 ORTHO05D005990 2.2e-10 70.5 219 33.3
BcaB06g26692 Brassica carinata HOM05D011699 ORTHO05D008062 5.0e-10 69.3 191 30.9
PSO017G1362 Papaver somniferum HOM05D000347 ORTHO05D008062 1.1e-09 68.2 234 35.5
C07p11290 Brassica napus HOM05D011699 ORTHO05D008062 1.4e-09 67.8 196 31.1
BolC7t41607H Brassica oleracea HOM05D011699 ORTHO05D008062 1.4e-09 67.8 191 31.9
BcaC06g35749 Brassica carinata HOM05D011699 ORTHO05D008062 2.5e-09 67.0 191 31.9
Sp3g22490 Schrenkiella parvula HOM05D011699 ORTHO05D008062 7.2e-09 65.5 193 32.6
Nitab4.5_0006773g0040 Nicotiana tabacum HOM05D000347 ORTHO05D008062 4.6e-08 62.8 44 65.9
ECA248G1409 Erigeron canadensis HOM05D000102 ORTHO05D000138 8.7e-07 58.5 76 52.6
Zm00001eb379630 Zea mays HOM05D042818 ORTHO05D008062 1.5e-06 57.8 188 36.2
PSO063G6109 Papaver somniferum HOM05D000347 ORTHO05D008062 2.5e-06 57.0 234 32.5


User provided reference genes

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