Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00707 Striga asiatica HOM05D003890 ORTHO05D004514 5.1e-57 224.2 111 100.0
SGA_v2.0_scaffold8G04590 Striga asiatica HOM05D003890 ORTHO05D004514 3.8e-12 75.1 129 42.6
Dinv36258 Davidia involucrata HOM05D003890 ORTHO05D004514 3.6e-10 68.6 134 41.0
Actinidia06907 Actinidia chinensis HOM05D003890 ORTHO05D004514 6.1e-10 67.8 126 42.1
Peaxi162Scf00004g02340 Petunia axillaris HOM05D003890 ORTHO05D004514 7.9e-10 67.4 109 43.1
FAN21G3604 Fragaria x ananassa HOM05D003890 ORTHO05D004514 1.8e-09 66.2 131 36.6
ClCG03G013240 Citrullus lanatus HOM05D003890 ORTHO05D004514 3.0e-09 65.5 133 40.6
FvH4_3g28850 Fragaria vesca HOM05D003890 ORTHO05D004514 3.0e-09 65.5 131 36.6
FAN11G0759 Fragaria x ananassa HOM05D003890 ORTHO05D004514 3.0e-09 65.5 131 36.6
FAN16G3317 Fragaria x ananassa HOM05D003890 ORTHO05D004514 3.0e-09 65.5 131 36.6
FAN25G3809 Fragaria x ananassa HOM05D003890 ORTHO05D004514 3.0e-09 65.5 131 36.6
MSTRG.21378 Avicennia marina HOM05D003890 ORTHO05D004514 5.1e-09 64.7 127 39.4
Aqoxy2G00137 Aquilegia oxysepala HOM05D003890 ORTHO05D004514 1.1e-08 63.5 129 35.7
RcHm_v2.0_Chr5g0052051 Rosa chinensis HOM05D003890 ORTHO05D004514 1.1e-08 63.5 128 36.7
Gohir.D05G072300 Gossypium hirsutum HOM05D003890 ORTHO05D004514 1.9e-08 62.8 139 34.5
Gorai.009G073300 Gossypium raimondii HOM05D003890 ORTHO05D004514 1.9e-08 62.8 139 34.5
Gohir.A05G069400 Gossypium hirsutum HOM05D003890 ORTHO05D004514 2.5e-08 62.4 139 33.8
Nn2g15369 Nelumbo nucifera HOM05D003890 ORTHO05D004514 2.5e-08 62.4 138 37.7
MSTRG.18426 Avicennia marina HOM05D003890 ORTHO05D004514 3.3e-08 62.0 125 39.2
CAN.G599.2 Capsicum annuum HOM05D003890 ORTHO05D004514 3.3e-08 62.0 124 37.1
COL.COLO4_07583 Corchorus olitorius HOM05D003890 ORTHO05D004514 3.3e-08 62.0 142 35.9
Manes.06G164200 Manihot esculenta HOM05D003890 ORTHO05D004514 3.3e-08 62.0 136 35.3
Actinidia16334 Actinidia chinensis HOM05D003890 ORTHO05D004514 4.3e-08 61.6 126 39.7
CiPaw.14G119100 Carya illinoinensis HOM05D003890 ORTHO05D004514 4.3e-08 61.6 135 38.5
Oeu001480.1 Olea europaea HOM05D003890 ORTHO05D004514 4.3e-08 61.6 129 37.2
Solyc11g065740.2 Solanum lycopersicum HOM05D003890 ORTHO05D004514 7.4e-08 60.8 126 37.3
TAR636G2753 Trochodendron aralioides HOM05D003890 ORTHO05D004514 7.4e-08 60.8 135 36.3
CiPaw.13G160900 Carya illinoinensis HOM05D003890 ORTHO05D004514 9.7e-08 60.5 135 37.0
Glyma.18G070500 Glycine max HOM05D003890 ORTHO05D004514 9.7e-08 60.5 132 39.4
Phvul.006G062600 Phaseolus vulgaris HOM05D003890 ORTHO05D004514 9.7e-08 60.5 134 36.6
Sopen11g025500 Solanum pennellii HOM05D003890 ORTHO05D004514 9.7e-08 60.5 126 36.5
Thecc.09G233900 Theobroma cacao HOM05D003890 ORTHO05D004514 9.7e-08 60.5 137 34.3
CsaV3_1G042820 Cucumis sativus L. HOM05D003890 ORTHO05D004514 1.3e-07 60.1 134 36.6
PGSC0003DMG400007341 Solanum tuberosum HOM05D003890 ORTHO05D004514 1.3e-07 60.1 126 37.3
MELO3C015193.2 Cucumis melo HOM05D003890 ORTHO05D004514 1.7e-07 59.7 134 36.6
Ca_14881_v3 Cicer arietinum L. HOM05D003890 ORTHO05D004514 2.2e-07 59.3 134 37.3
Thhalv10015929m.g Eutrema salsugineum HOM05D003890 ORTHO05D004514 2.2e-07 59.3 98 43.9
Nitab4.5_0001587g0060 Nicotiana tabacum HOM05D003890 ORTHO05D004514 2.2e-07 59.3 136 36.8
VMungo0540G2384 Vigna mungo HOM05D003890 ORTHO05D004514 2.2e-07 59.3 134 36.6
Sc09g0000720 Simmondsia chinensis HOM05D003890 ORTHO05D004514 2.8e-07 58.9 121 37.2
Glyma.08G335500 Glycine max HOM05D003890 ORTHO05D004514 3.7e-07 58.5 137 38.0
Manes.14G002800 Manihot esculenta HOM05D003890 ORTHO05D004514 3.7e-07 58.5 136 34.6
Oeu016684.1 Olea europaea HOM05D003890 ORTHO05D004514 3.7e-07 58.5 129 38.0
CANSAT56G1539 Cannabis sativa HOM05D003890 ORTHO05D004514 4.8e-07 58.2 139 34.5
Cfa009770 Carpinus fangiana HOM05D003890 ORTHO05D004514 4.8e-07 58.2 137 35.8
Haze_23135 Corylus avellana HOM05D000807 ORTHO05D000662 4.8e-07 58.2 137 35.8
Eucgr.B03687 Eucalyptus grandis HOM05D003890 ORTHO05D004514 4.8e-07 58.2 141 36.9
Lj6g0021955 Lotus japonicus HOM05D003890 ORTHO05D004514 4.8e-07 58.2 138 36.2
Nitab4.5_0002741g0130 Nicotiana tabacum HOM05D003890 ORTHO05D004514 4.8e-07 58.2 136 36.0
Cc10_g03220 Coffea canephora HOM05D003890 ORTHO05D004514 6.3e-07 57.8 129 34.1
Duzib170G0856 Durio zibethinus HOM05D003890 ORTHO05D004514 8.2e-07 57.4 139 32.4
Nn7g36206 Nelumbo nucifera HOM05D003890 ORTHO05D004514 8.2e-07 57.4 137 32.1
Potri.001G258100 Populus trichocarpa HOM05D003890 ORTHO05D004514 8.2e-07 57.4 137 32.1
Sabra16G0157800 Salix brachista HOM05D003890 ORTHO05D004514 8.2e-07 57.4 137 35.0
Medtr3g061630 Medicago truncatula HOM05D003890 ORTHO05D004514 1.1e-06 57.0 135 34.1
Cpa.g.sc84.53 Carica papaya HOM05D003890 ORTHO05D004514 1.4e-06 56.6 130 35.4
Sed0019717 Sechium edule HOM05D003890 ORTHO05D004514 1.4e-06 56.6 134 35.8
Duzib150G1364 Durio zibethinus HOM05D003890 ORTHO05D004514 1.8e-06 56.2 140 33.6
Lj1A330T24 Lonicera japonica HOM05D003890 ORTHO05D004514 1.8e-06 56.2 122 36.9
Prupe.4G249500 Prunus persica HOM05D003890 ORTHO05D004514 1.8e-06 56.2 135 34.1
QL01p004686 Quercus lobata HOM05D003890 ORTHO05D004514 1.8e-06 56.2 135 35.6
Sabra09G0038800 Salix brachista HOM05D003890 ORTHO05D004514 1.8e-06 56.2 128 37.5
Atru.chr3.2715 Acer truncatum HOM05D003890 ORTHO05D004514 5.3e-06 54.7 127 35.4
BcaB01g04825 Brassica carinata HOM05D003890 ORTHO05D004514 6.9e-06 54.3 121 36.4
C03p11250 Brassica napus HOM05D003890 ORTHO05D004514 6.9e-06 54.3 121 36.4
BolC3t13596H Brassica oleracea HOM05D003890 ORTHO05D004514 6.9e-06 54.3 121 36.4
Psat5g163000 Pisum sativum HOM05D003890 ORTHO05D004514 6.9e-06 54.3 138 34.1
Dinv09354 Davidia involucrata HOM05D003890 ORTHO05D004514 9.1e-06 53.9 136 32.4


User provided reference genes

Program Settings