Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00704 Striga asiatica HOM05D007427 ORTHO05D006413 4.1e-27 125.2 141 100.0
SGA_v2.0_scaffold8G04664 Striga asiatica HOM05D007427 ORTHO05D006413 1.1e-16 90.5 64 79.7
MSTRG.21440 Avicennia marina HOM05D007427 ORTHO05D006413 1.1e-11 73.9 64 67.2
SGA_v2.0_scaffold42G16152 Striga asiatica HOM05D007427 ORTHO05D006413 4.5e-10 68.6 71 63.4
Migut.N02250 Erythranthe guttata HOM05D007427 ORTHO05D006413 3.8e-09 65.5 64 65.6
MSTRG.17537 Avicennia marina HOM05D007427 ORTHO05D006413 1.2e-07 60.5 66 65.2
Rhsim13G0042300 Rhododendron simsii HOM05D007427 ORTHO05D006413 1.6e-07 60.1 63 57.1
SalBow4G2254 Salvia bowleyana HOM05D007427 ORTHO05D006413 2.7e-07 59.3 52 61.5
CiPaw.04G107800 Carya illinoinensis HOM05D007427 ORTHO05D006413 3.6e-07 58.9 58 58.6
Lj1g0018605 Lotus japonicus HOM05D007427 ORTHO05D006413 4.7e-07 58.5 63 55.6
unitig_22.g6317 Utricularia gibba HOM05D007427 ORTHO05D006413 4.7e-07 58.5 64 57.8
Actinidia23744 Actinidia chinensis HOM05D007427 ORTHO05D006413 1.4e-06 57.0 57 56.1
arahy.Tifrunner.gnm1.ann1.KG3A2Z Arachis hypogaea HOM05D007427 ORTHO05D006413 1.4e-06 57.0 64 50.0
CiPaw.03G152700 Carya illinoinensis HOM05D007427 ORTHO05D006413 1.4e-06 57.0 62 54.8
Duzib138G0914 Durio zibethinus HOM05D007427 ORTHO05D006413 1.4e-06 57.0 59 57.6
Glyma.03G170800 Glycine max HOM05D007427 ORTHO05D006413 1.4e-06 57.0 64 56.2
Thecc.01G231600 Theobroma cacao HOM05D007427 ORTHO05D006413 1.8e-06 56.6 61 52.5
QL09p044390 Quercus lobata HOM05D007427 ORTHO05D006413 2.3e-06 56.2 58 53.4
Glyma.19G171900 Glycine max HOM05D007427 ORTHO05D006413 4.0e-06 55.5 62 56.5
Phvul.001G168900 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 5.2e-06 55.1 54 57.4
VMungo1383G3325 Vigna mungo HOM05D007427 ORTHO05D006413 6.7e-06 54.7 56 57.1
unitig_8.g3079 Utricularia gibba HOM05D007427 ORTHO05D006413 8.8e-06 54.3 66 51.5
unitig_8.g3750 Utricularia gibba HOM05D007427 ORTHO05D006413 8.8e-06 54.3 57 63.2


User provided reference genes

Program Settings