Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00652 Striga asiatica HOM05D007706 ORTHO05D009593 4.8e-138 495.0 348 100.0
Migut.D00475 Erythranthe guttata HOM05D007706 ORTHO05D009593 1.4e-36 157.9 287 48.1
Migut.N02230 Erythranthe guttata HOM05D007706 ORTHO05D009593 2.5e-33 147.1 286 40.2
SalBow4G1824 Salvia bowleyana HOM05D007706 ORTHO05D009593 6.1e-32 142.5 277 41.9
MSTRG.18353 Avicennia marina HOM05D007706 ORTHO05D009593 1.8e-31 141.0 298 39.3
PGSC0003DMG400008584 Solanum tuberosum HOM05D007706 ORTHO05D009593 1.1e-25 121.7 283 36.4
Sopen09g025790 Solanum pennellii HOM05D007706 ORTHO05D009593 1.4e-25 121.3 285 37.2
Medtr7g098450 Medicago truncatula HOM05D007706 ORTHO05D009593 9.4e-25 118.6 267 37.5
Cc01_g17810 Coffea canephora HOM05D007706 ORTHO05D009593 1.2e-24 118.2 281 37.4
TPR.G30860 Trifolium pratense HOM05D003225 ORTHO05D003818 2.1e-24 117.5 277 36.5
Peaxi162Scf00043g02924 Petunia axillaris HOM05D007706 ORTHO05D009593 4.7e-24 116.3 211 43.1
Solyc09g064630.3 Solanum lycopersicum HOM05D007706 ORTHO05D009593 4.7e-24 116.3 284 36.3
Nitab4.5_0007992g0040 Nicotiana tabacum HOM05D007706 ORTHO05D009593 1.4e-23 114.8 290 39.3
Cfa002482 Carpinus fangiana HOM05D007706 ORTHO05D009593 3.0e-23 113.6 292 33.9
Haze_24704 Corylus avellana HOM05D007706 ORTHO05D009593 3.0e-23 113.6 293 36.5
ECA236G0985 Erigeron canadensis HOM05D007706 ORTHO05D009593 3.9e-23 113.2 282 41.1
Psat3g053960 Pisum sativum HOM05D007706 ORTHO05D009593 5.2e-23 112.8 266 36.5
Dinv16399 Davidia involucrata HOM05D007706 ORTHO05D009593 1.1e-22 111.7 294 37.4
Lsat_1_v5_gn_8_92000 Lactuca sativa HOM05D007706 ORTHO05D009593 3.3e-22 110.2 274 36.5
Ca_08742_v3 Cicer arietinum L. HOM05D007706 ORTHO05D009593 9.7e-22 108.6 280 37.1
Lj2C1142T11 Lonicera japonica HOM05D007706 ORTHO05D009593 1.3e-21 108.2 288 33.7
Psat3g051920 Pisum sativum HOM05D007706 ORTHO05D009593 3.7e-21 106.7 273 39.9
Glyma.19G168300 Glycine max HOM05D007706 ORTHO05D009593 8.2e-21 105.5 278 37.4
Lj1g0013336 Lotus japonicus HOM05D007706 ORTHO05D009593 2.4e-20 104.0 290 37.9
Nn3g19784 Nelumbo nucifera HOM05D007706 ORTHO05D009593 1.6e-19 101.3 294 35.7
arahy.Tifrunner.gnm1.ann1.S77KHM Arachis hypogaea HOM05D007706 ORTHO05D009593 5.9e-19 99.4 281 35.6
Duzib138G1124 Durio zibethinus HOM05D007706 ORTHO05D009593 5.9e-19 99.4 308 35.4
Medtr7g099260 Medicago truncatula HOM05D007706 ORTHO05D009593 5.9e-19 99.4 277 35.7
arahy.Tifrunner.gnm1.ann1.NJ5037 Arachis hypogaea HOM05D007706 ORTHO05D009593 1.3e-18 98.2 283 36.4
TPR.G20053 Trifolium pratense HOM05D007706 ORTHO05D009593 1.3e-18 98.2 274 33.2
Aqoxy5G00146 Aquilegia oxysepala HOM05D007706 ORTHO05D009593 1.7e-18 97.8 293 33.8
AUR62008796 Chenopodium quinoa HOM05D007706 ORTHO05D009593 1.7e-18 97.8 277 33.9
VMungo1383G0992 Vigna mungo HOM05D007706 ORTHO05D009593 1.7e-18 97.8 288 35.4
EL10Ac7g17683 Beta vulgaris HOM05D007706 ORTHO05D009593 2.9e-18 97.1 292 36.0
HanXRQChr04g0108691 Helianthus annuus HOM05D007706 ORTHO05D009593 2.9e-18 97.1 279 32.3
Thecc.01G250700 Theobroma cacao HOM05D007706 ORTHO05D009593 1.1e-17 95.1 308 37.0
Sopen12g010960 Solanum pennellii HOM05D000004 ORTHO05D009593 1.9e-17 94.4 156 40.4
vmacro02710 Vaccinium macrocarpon HOM05D007706 ORTHO05D009593 1.9e-17 94.4 292 34.9
Gohir.A07G204400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 2.5e-17 94.0 296 36.1
Phvul.001G164700 Phaseolus vulgaris HOM05D007706 ORTHO05D009593 2.5e-17 94.0 287 33.8
Prupe.8G215700 Prunus persica HOM05D007706 ORTHO05D009593 2.5e-17 94.0 297 33.0
Ah.15g092610 Amaranthus hybridus HOM05D007706 ORTHO05D009593 3.2e-17 93.6 277 34.3
Hma1.2p1_1930F.1_g307940 Hydrangea macrophylla HOM05D007706 ORTHO05D009593 3.2e-17 93.6 290 36.9
Potri.002G256900 Populus trichocarpa HOM05D007706 ORTHO05D009593 3.2e-17 93.6 292 37.7
PGR031G0475 Punica granatum HOM05D007706 ORTHO05D009593 3.2e-17 93.6 277 33.6
CSS0048547 Camellia sinensis var. sinensis HOM05D007706 ORTHO05D009593 7.2e-17 92.4 308 35.7
Nitab4.5_0000845g0230 Nicotiana tabacum HOM05D007706 ORTHO05D009593 1.2e-16 91.7 85 57.6
Rhsim13G0040100 Rhododendron simsii HOM05D007706 ORTHO05D009593 1.2e-16 91.7 306 32.7
Nn1g02965 Nelumbo nucifera HOM05D007706 ORTHO05D009593 1.6e-16 91.3 307 35.5
QL09p041349 Quercus lobata HOM05D007706 ORTHO05D009593 3.6e-16 90.1 291 34.4
Gohir.D07G210400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 4.7e-16 89.7 304 35.9
Ca_08762_v3 Cicer arietinum L. HOM05D003225 ORTHO05D009593 6.1e-16 89.4 265 34.3
Dinv34676 Davidia involucrata HOM05D007706 ORTHO05D009593 6.1e-16 89.4 294 36.1
Glyma.03G167200 Glycine max HOM05D007706 ORTHO05D009593 8.0e-16 89.0 274 35.4
FAN27G2030 Fragaria x ananassa HOM05D007706 ORTHO05D009593 1.0e-15 88.6 289 32.2
Gorai.001G237800 Gossypium raimondii HOM05D007706 ORTHO05D009593 1.0e-15 88.6 302 35.4
Ca_30216_v3 Cicer arietinum L. HOM05D003225 ORTHO05D003818 1.4e-15 88.2 247 34.8
Ciclev10020687m.g Citrus clementina HOM05D007706 ORTHO05D009593 1.4e-15 88.2 288 36.1
Eucgr.A01320 Eucalyptus grandis HOM05D007706 ORTHO05D009593 1.8e-15 87.8 296 31.1
CiPaw.04G190500 Carya illinoinensis HOM05D007706 ORTHO05D009593 3.0e-15 87.0 287 33.4
PSO541G4538 Papaver somniferum HOM05D007706 ORTHO05D009593 4.0e-15 86.7 296 31.4
Lalb_Chr20g0113631 Lupinus albus HOM05D007706 ORTHO05D009593 1.5e-14 84.7 280 36.1
TWI12G0795 Tripterygium wilfordii HOM05D007706 ORTHO05D009593 2.0e-14 84.3 279 34.1
CsaV3_6G007370 Cucumis sativus L. HOM05D007706 ORTHO05D009593 5.7e-14 82.8 285 31.2
SalBow7G0697 Salvia bowleyana HOM05D007706 ORTHO05D009593 5.7e-14 82.8 264 30.3
RcHm_v2.0_Chr6g0286691 Rosa chinensis HOM05D007706 ORTHO05D009593 7.5e-14 82.4 288 31.2
FvH4_2g20530 Fragaria vesca HOM05D007706 ORTHO05D009593 9.7e-14 82.0 286 32.9
FAN24G1454 Fragaria x ananassa HOM05D007706 ORTHO05D009593 9.7e-14 82.0 286 32.9
MBI07_g23229_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 1.3e-13 81.6 288 31.6
Oeu026810.1 Olea europaea HOM05D007706 ORTHO05D009593 1.3e-13 81.6 88 59.1
MD05G1189100 Malus domestica HOM05D007706 ORTHO05D009593 2.2e-13 80.9 287 30.7
PSO675G7213 Papaver somniferum HOM05D007706 ORTHO05D009593 2.2e-13 80.9 274 31.4
Sabra02G0195300 Salix brachista HOM05D007706 ORTHO05D009593 1.4e-12 78.2 295 34.2
Duzib133G1528 Durio zibethinus HOM05D007706 ORTHO05D009593 3.1e-12 77.0 295 33.9
MELO3C022390.2 Cucumis melo HOM05D007706 ORTHO05D009593 5.3e-12 76.3 288 33.3
HPP92_022478 Vanilla planifolia HOM05D007706 ORTHO05D009593 7.0e-12 75.9 263 33.1
Os03g0140700 Oryza sativa ssp. japonica HOM05D007706 ORTHO05D009593 5.9e-11 72.8 268 32.5
MSTRG.21461 Avicennia marina HOM05D007706 ORTHO05D009593 1.0e-10 72.0 77 53.2
Cpa.g.sc87.26 Carica papaya HOM05D007706 ORTHO05D009593 1.3e-10 71.6 299 35.8
PSO782G3886 Papaver somniferum HOM05D006910 ORTHO05D009593 1.7e-10 71.2 294 30.6
FAN15G0362 Fragaria x ananassa HOM05D007706 ORTHO05D009593 2.9e-10 70.5 285 30.2
TAR362G1069 Trochodendron aralioides HOM05D007706 ORTHO05D009593 2.9e-10 70.5 300 30.0
Manes.12G037850 Manihot esculenta HOM05D007706 ORTHO05D009593 6.5e-10 69.3 296 34.5
MBI10_g26041_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 1.1e-09 68.6 267 30.3
CiPaw.03G270700 Carya illinoinensis HOM05D007706 ORTHO05D009593 1.9e-09 67.8 273 30.4
AUR62025443 Chenopodium quinoa HOM05D006910 ORTHO05D008937 1.2e-08 65.1 81 48.1
CSS0027831 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 3.6e-08 63.5 78 47.4
Manes.03G158500 Manihot esculenta HOM05D006910 ORTHO05D008937 4.7e-08 63.2 201 31.8
Actinidia37550 Actinidia chinensis HOM05D006910 ORTHO05D008937 8.0e-08 62.4 75 45.3
Dinv27116 Davidia involucrata HOM05D006910 ORTHO05D008937 6.8e-07 59.3 78 44.9
Cc03_g06380 Coffea canephora HOM05D006910 ORTHO05D008937 8.8e-07 58.9 78 42.3
PSO478G1200 Papaver somniferum HOM05D006910 ORTHO05D009593 8.8e-07 58.9 210 31.0
CSS0021483 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 1.2e-06 58.5 79 41.8
COL.COLO4_10568 Corchorus olitorius HOM05D007706 ORTHO05D009593 1.2e-06 58.5 34 73.5
Prupe.1G049000 Prunus persica HOM05D006910 ORTHO05D008937 1.2e-06 58.5 285 29.5
Lalb_Chr01g0019491 Lupinus albus HOM05D007706 ORTHO05D009593 1.5e-06 58.2 83 45.8
Actinidia30127 Actinidia chinensis HOM05D007706 ORTHO05D009593 2.0e-06 57.8 73 45.2
CSS0004989 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 2.0e-06 57.8 287 33.4
CDE05G1228 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 2.6e-06 57.4 206 29.1
ClCG06G001430 Citrullus lanatus HOM05D007706 ORTHO05D009593 3.4e-06 57.0 309 31.7
SEGI_40436 Sequoiadendron giganteum HOM05D052464 ORTHO05D009593 4.4e-06 56.6 300 27.7
vmacro15481 Vaccinium macrocarpon HOM05D006910 ORTHO05D008937 4.4e-06 56.6 44 59.1
SalBow2G0872 Salvia bowleyana HOM05D006910 ORTHO05D008937 5.7e-06 56.2 78 42.3
TAR622G1049 Trochodendron aralioides HOM05D027966 ORTHO05D025782 7.5e-06 55.8 185 29.2


User provided reference genes

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