Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00644 Striga asiatica HOM05D007808 ORTHO05D009895 9.8e-250 866.3 429 100.0
Migut.D00468 Erythranthe guttata HOM05D007808 ORTHO05D009895 8.1e-119 431.4 478 50.6
SalBow4G3111 Salvia bowleyana HOM05D007808 ORTHO05D009895 4.9e-116 422.2 413 54.5
Actinidia37545 Actinidia chinensis HOM05D007808 ORTHO05D009895 2.4e-94 350.1 469 43.1
Oeu039657.1 Olea europaea HOM05D007808 ORTHO05D009895 2.6e-93 346.7 497 41.6
Lj2C1144T6 Lonicera japonica HOM05D007808 ORTHO05D009895 4.2e-91 339.3 477 40.9
Hma1.2p1_0273F.1_g109280 Hydrangea macrophylla HOM05D007808 ORTHO05D009895 2.7e-90 336.7 473 42.5
Sopen09g028660 Solanum pennellii HOM05D007808 ORTHO05D009895 7.4e-88 328.6 473 40.4
Solyc09g072860.2 Solanum lycopersicum HOM05D007808 ORTHO05D009895 1.6e-87 327.4 472 39.8
Nitab4.5_0000845g0040 Nicotiana tabacum HOM05D007808 ORTHO05D009895 5.3e-86 322.4 390 43.6
Manes.13G040600 Manihot esculenta HOM05D007808 ORTHO05D009895 9.0e-86 321.6 478 37.9
Thecc.01G251900 Theobroma cacao HOM05D007808 ORTHO05D009895 7.6e-85 318.5 475 38.9
Peaxi162Scf00415g00913 Petunia axillaris HOM05D007808 ORTHO05D009895 2.9e-84 316.6 424 41.3
QL09p041160 Quercus lobata HOM05D007808 ORTHO05D009895 4.9e-84 315.8 474 40.1
DCAR_018515 Daucus carota HOM05D007808 ORTHO05D009895 1.1e-83 314.7 448 39.3
Cc01_g17900 Coffea canephora HOM05D007808 ORTHO05D009895 5.5e-83 312.4 454 41.4
GSVIVG01028406001 Vitis vinifera HOM05D007808 ORTHO05D009895 1.8e-81 307.4 409 42.1
TWI18G1304 Tripterygium wilfordii HOM05D007808 ORTHO05D009895 3.0e-81 306.6 491 38.3
TAR633G0330 Trochodendron aralioides HOM05D007808 ORTHO05D009895 6.7e-81 305.4 513 37.6
CANSAT01G0990 Cannabis sativa HOM05D007808 ORTHO05D009895 2.1e-79 300.4 472 37.3
Potri.014G192200 Populus trichocarpa HOM05D007808 ORTHO05D009895 2.1e-79 300.4 481 38.5
Ciclev10020041m.g Citrus clementina HOM05D007808 ORTHO05D009895 2.8e-79 300.1 474 38.0
RcHm_v2.0_Chr6g0286881 Rosa chinensis HOM05D007808 ORTHO05D009895 3.7e-79 299.7 469 37.3
Aqoxy5G00155 Aquilegia oxysepala HOM05D007808 ORTHO05D009895 8.2e-79 298.5 462 39.8
HanXRQChr04g0111341 Helianthus annuus HOM05D007808 ORTHO05D009895 1.8e-78 297.4 470 38.1
Duzib138G1393 Durio zibethinus HOM05D007808 ORTHO05D009895 1.2e-77 294.7 491 36.5
Nn1g02938 Nelumbo nucifera HOM05D007808 ORTHO05D009895 7.6e-77 292.0 502 35.9
PGR031G1809 Punica granatum HOM05D007808 ORTHO05D009895 2.2e-76 290.4 466 36.1
Gohir.D07G157600 Gossypium hirsutum HOM05D007808 ORTHO05D009895 5.0e-76 289.3 479 37.0
Gohir.A07G151000 Gossypium hirsutum HOM05D007808 ORTHO05D009895 1.1e-75 288.1 475 37.1
Prupe.8G216500 Prunus persica HOM05D007808 ORTHO05D009895 1.4e-75 287.7 471 37.4
PSO832G1361 Papaver somniferum HOM05D007808 ORTHO05D009895 1.6e-74 284.3 475 37.7
FvH4_2g20710 Fragaria vesca HOM05D007808 ORTHO05D009895 3.5e-74 283.1 467 36.6
Atru.chr5.1818 Acer truncatum HOM05D007808 ORTHO05D009895 1.3e-73 281.2 477 36.1
FAN15G3261 Fragaria x ananassa HOM05D007808 ORTHO05D009895 3.9e-73 279.6 410 39.0
FAN20G2653 Fragaria x ananassa HOM05D007808 ORTHO05D009895 2.5e-72 276.9 418 38.8
FAN27G2486 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.3e-71 274.6 410 38.8
COL.COLO4_10584 Corchorus olitorius HOM05D007808 ORTHO05D009895 2.2e-71 273.9 495 35.2
Gorai.001G180500 Gossypium raimondii HOM05D007808 ORTHO05D009895 6.3e-71 272.3 475 36.0
CSS0046569 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 2.4e-70 270.4 368 41.6
CSS0017675 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 4.1e-70 269.6 368 41.6
MBI10_g30718_MAGBIO Magnolia biondii HOM05D007808 ORTHO05D009895 1.7e-68 264.2 459 36.6
Nitab4.5_0010039g0030 Nicotiana tabacum HOM05D007808 ORTHO05D009895 4.6e-66 256.1 422 37.0
FAN24G0750 Fragaria x ananassa HOM05D007808 ORTHO05D009895 3.0e-65 253.4 399 38.1
Carub.0008s0453 Capsella rubella HOM05D007808 ORTHO05D009895 6.7e-65 252.3 453 34.2
BcaB07g30982 Brassica carinata HOM05D007808 ORTHO05D009895 1.3e-63 248.1 455 34.5
AT5G44010 Arabidopsis thaliana HOM05D007808 ORTHO05D009895 2.4e-62 243.8 453 34.2
Sc05g0003060 Simmondsia chinensis HOM05D007808 ORTHO05D009895 4.1e-62 243.0 388 37.1
AL8G16070 Arabidopsis lyrata HOM05D007808 ORTHO05D009895 2.6e-61 240.4 455 33.4
A09p20750 Brassica napus HOM05D007808 ORTHO05D009895 1.0e-60 238.4 454 33.0
BcaC04g21876 Brassica carinata HOM05D007808 ORTHO05D009895 1.4e-59 234.6 453 32.7
C09p26260 Brassica napus HOM05D007808 ORTHO05D009895 1.4e-59 234.6 453 32.7
BraA09t37679Z Brassica rapa HOM05D007808 ORTHO05D009895 1.4e-59 234.6 455 32.7
THA.LOC104801132 Tarenaya hassleriana HOM05D007808 ORTHO05D009895 4.2e-59 233.0 453 32.2
CARHR179280 Cardamine hirsuta HOM05D007808 ORTHO05D009895 5.1e-57 226.1 389 35.7
Eucgr.A01321 Eucalyptus grandis HOM05D007808 ORTHO05D009895 5.1e-57 226.1 396 36.4
PSO764G0215 Papaver somniferum HOM05D007808 ORTHO05D009895 2.6e-56 223.8 433 34.2
ATR0736G152 Amborella trichopoda HOM05D007808 ORTHO05D009895 1.7e-55 221.1 463 32.4
Lsat_1_v5_gn_8_92100 Lactuca sativa HOM05D007808 ORTHO05D009895 8.2e-55 218.8 397 33.2
BolC9t55528H Brassica oleracea HOM05D007808 ORTHO05D009895 5.0e-52 209.5 385 33.2
CiPaw.04G189500 Carya illinoinensis HOM05D007808 ORTHO05D009895 2.6e-48 197.2 224 45.5
Thhalv10003421m.g Eutrema salsugineum HOM05D007808 ORTHO05D009895 6.3e-47 192.6 423 32.2
CAN.G1395.2 Capsicum annuum HOM05D007808 ORTHO05D009895 1.8e-46 191.0 305 38.0
Os02g0814600 Oryza sativa ssp. japonica HOM05D007808 ORTHO05D009895 1.8e-46 191.0 471 29.1
HPP92_025831 Vanilla planifolia HOM05D007808 ORTHO05D009895 3.8e-44 183.3 425 29.9
Sabra14G0143900 Salix brachista HOM05D007808 ORTHO05D009895 3.6e-42 176.8 322 34.2
Zm00001eb191560 Zea mays HOM05D007808 ORTHO05D009895 3.6e-42 176.8 465 29.5
BcaC04g21877 Brassica carinata HOM05D007808 ORTHO05D009895 1.4e-41 174.9 363 32.5
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 1.1e-30 138.7 217 36.9
Cpa.g.sc87.15 Carica papaya HOM05D007808 ORTHO05D009895 3.3e-27 127.1 220 34.5
Haze_24684 Corylus avellana HOM05D007808 ORTHO05D009895 5.5e-27 126.3 231 32.0
Gorai.002G091900 Gossypium raimondii HOM05D007808 ORTHO05D009895 1.4e-25 121.7 207 35.7
Sp2g08850 Schrenkiella parvula HOM05D007808 ORTHO05D009895 1.1e-19 102.1 281 28.1
CDE02G3651 Ceratophyllum demersum HOM05D007808 ORTHO05D009895 2.1e-18 97.8 284 27.8
AagrBONN_evm.TU.Sc2ySwM_117.2846 Anthoceros agrestis HOM05D007808 ORTHO05D009895 8.3e-15 85.9 440 20.9
PGSC0003DMG400003825 Solanum tuberosum HOM05D007808 ORTHO05D009895 8.3e-15 85.9 54 63.0
CiPaw.04G189400 Carya illinoinensis HOM05D007808 ORTHO05D009895 4.6e-13 80.1 56 57.1
FAN27G0174 Fragaria x ananassa HOM05D007808 ORTHO05D009895 3.9e-12 77.0 54 55.6
SEGI_27571 Sequoiadendron giganteum HOM05D007808 ORTHO05D009895 9.5e-11 72.4 204 27.0
CANSAT56G3388 Cannabis sativa HOM05D007808 ORTHO05D009895 2.0e-08 64.7 71 40.8
Gohir.D11G218200 Gossypium hirsutum HOM05D007808 ORTHO05D009895 8.3e-07 59.3 137 32.1


User provided reference genes

Program Settings