Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00635 Striga asiatica HOM05D006343 ORTHO05D005694 2.0e-156 555.8 309 100.0
Oeu055797.1 Olea europaea HOM05D006343 ORTHO05D005694 6.6e-38 162.2 324 38.3
SalBow6G3791 Salvia bowleyana HOM05D006343 ORTHO05D005694 1.1e-37 161.4 326 38.7
MSTRG.12522 Avicennia marina HOM05D006343 ORTHO05D005694 9.5e-37 158.3 322 38.5
MSTRG.18339 Avicennia marina HOM05D006343 ORTHO05D005694 9.5e-37 158.3 322 40.1
Oeu035719.1 Olea europaea HOM05D003054 ORTHO05D003376 1.2e-34 151.4 288 37.2
Oeu035725.1 Olea europaea HOM05D003054 ORTHO05D003376 9.8e-34 148.3 287 38.0
Oeu035731.1 Olea europaea HOM05D006343 ORTHO05D005694 1.7e-33 147.5 328 35.7
Dinv43841 Davidia involucrata HOM05D006343 ORTHO05D005694 8.3e-33 145.2 324 37.3
Hma1.2p1_0702F.1_g206150 Hydrangea macrophylla HOM05D006343 ORTHO05D005694 2.0e-31 140.6 323 39.9
Actinidia20887 Actinidia chinensis HOM05D006343 ORTHO05D005694 2.1e-28 130.6 329 33.7
Oeu035722.1 Olea europaea HOM05D006343 ORTHO05D005694 3.6e-28 129.8 310 38.4
Cc02_g38320 Coffea canephora HOM05D006343 ORTHO05D005694 4.0e-27 126.3 319 35.1
unitig_22.g5289 Utricularia gibba HOM05D006343 ORTHO05D005694 5.8e-26 122.5 322 37.0
Nitab4.5_0001655g0110 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.3e-25 121.3 335 33.7
Lsat_1_v5_gn_7_4100 Lactuca sativa HOM05D006343 ORTHO05D005694 1.4e-24 117.9 333 32.4
Ciclev10021525m.g Citrus clementina HOM05D006343 ORTHO05D005694 2.4e-24 117.1 337 33.5
Rhsim01G0164400 Rhododendron simsii HOM05D006343 ORTHO05D005694 3.2e-24 116.7 344 33.4
TAR629G3314 Trochodendron aralioides HOM05D006343 ORTHO05D005694 7.1e-24 115.5 327 33.9
Sabra14G0063500 Salix brachista HOM05D006343 ORTHO05D005694 2.7e-23 113.6 338 35.2
GSVIVG01026998001 Vitis vinifera HOM05D006343 ORTHO05D005694 6.0e-23 112.5 344 33.1
Potri.014G087500 Populus trichocarpa HOM05D006343 ORTHO05D005694 1.3e-22 111.3 345 33.9
Prupe.2G173800 Prunus persica HOM05D006343 ORTHO05D005694 3.0e-22 110.2 336 33.3
Manes.01G254700 Manihot esculenta HOM05D006343 ORTHO05D005694 3.9e-22 109.8 348 32.8
Nitab4.5_0001040g0020 Nicotiana tabacum HOM05D006343 ORTHO05D005694 8.6e-22 108.6 323 31.0
Potri.002G161700 Populus trichocarpa HOM05D006343 ORTHO05D005694 8.6e-22 108.6 348 33.6
CiPaw.02G033200 Carya illinoinensis HOM05D006343 ORTHO05D005694 3.3e-21 106.7 348 31.6
vmacro20913 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 3.3e-21 106.7 347 33.1
Oeu035728.1 Olea europaea HOM05D006343 ORTHO05D005694 9.5e-21 105.1 307 39.1
Nitab4.5_0003369g0030 Nicotiana tabacum HOM05D006343 ORTHO05D005694 8.1e-20 102.1 328 30.5
CAN.G650.25 Capsicum annuum HOM05D006343 ORTHO05D005694 1.4e-19 101.3 346 31.2
Dinv32502 Davidia involucrata HOM05D006343 ORTHO05D005694 1.4e-19 101.3 161 44.7
CSS0004449 Camellia sinensis var. sinensis HOM05D006343 ORTHO05D005694 6.8e-19 99.0 326 28.8
Lsat_1_v5_gn_7_4060 Lactuca sativa HOM05D006343 ORTHO05D005694 6.8e-19 99.0 342 28.4
Nitab4.5_0002749g0010 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.5e-18 97.8 331 30.5
Manes.05G031900 Manihot esculenta HOM05D006343 ORTHO05D005694 3.4e-18 96.7 356 32.0
Sabra02G0128600 Salix brachista HOM05D006343 ORTHO05D005694 5.8e-18 95.9 339 31.6
VMungo0331G0061 Vigna mungo HOM05D006343 ORTHO05D005694 5.8e-18 95.9 333 32.1
Glyma.07G068200 Glycine max HOM05D006343 ORTHO05D005694 7.6e-18 95.5 355 31.8
Rhsim01G0164000 Rhododendron simsii HOM05D006343 ORTHO05D005694 1.7e-17 94.4 352 34.4
CAN.G2424.1 Capsicum annuum HOM05D006343 ORTHO05D005694 2.2e-17 94.0 365 30.7
Atru.chr5.528 Acer truncatum HOM05D006343 ORTHO05D005694 4.9e-17 92.8 332 31.9
CAN.G650.35 Capsicum annuum HOM05D006343 ORTHO05D005694 6.4e-17 92.4 346 28.3
Migut.D00457 Erythranthe guttata HOM05D006343 ORTHO05D005694 6.4e-17 92.4 174 43.1
Phvul.010G101000 Phaseolus vulgaris HOM05D006343 ORTHO05D005694 6.4e-17 92.4 336 31.5
CDE02G1832 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 8.4e-17 92.0 320 26.6
CANSAT56G2487 Cannabis sativa HOM05D006343 ORTHO05D005694 1.4e-16 91.3 364 29.1
unitig_8.g3737 Utricularia gibba HOM05D006343 ORTHO05D005694 1.4e-16 91.3 318 32.1
Nn1g01591 Nelumbo nucifera HOM05D006343 ORTHO05D005694 2.4e-16 90.5 353 30.9
Solyc02g070700.3 Solanum lycopersicum HOM05D006343 ORTHO05D005694 3.2e-16 90.1 333 28.2
Sopen02g019780 Solanum pennellii HOM05D006343 ORTHO05D005694 4.1e-16 89.7 342 29.5
CiPaw.01G064000 Carya illinoinensis HOM05D006343 ORTHO05D005694 9.2e-16 88.6 361 26.0
CAN.G650.32 Capsicum annuum HOM05D006343 ORTHO05D005694 1.2e-15 88.2 345 27.8
vmacro20912 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 6.0e-15 85.9 348 28.7
Glyma.16G034200 Glycine max HOM05D006343 ORTHO05D005694 2.3e-14 84.0 375 30.4
CDE06G1281 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 3.9e-14 83.2 153 35.3
CsaV3_6G000720 Cucumis sativus L. HOM05D006343 ORTHO05D005694 5.1e-14 82.8 321 30.8
FAN10G0914 Fragaria x ananassa HOM05D006343 ORTHO05D005694 5.1e-14 82.8 361 26.6
FAN10G3829 Fragaria x ananassa HOM05D006343 ORTHO05D005694 5.1e-14 82.8 361 26.6
MD07G1133500 Malus domestica HOM05D006343 ORTHO05D005694 6.6e-14 82.4 352 26.4
RcHm_v2.0_Chr1g0357021 Rosa chinensis HOM05D006343 ORTHO05D005694 6.6e-14 82.4 356 27.5
Rhsim06G0236200 Rhododendron simsii HOM05D006343 ORTHO05D005694 3.3e-13 80.1 321 29.3
SGA_v2.0_scaffold138G35202 Striga asiatica HOM05D004007 ORTHO05D005127 5.6e-13 79.3 119 52.1
ECA233G1044 Erigeron canadensis HOM05D006343 ORTHO05D005694 9.6e-13 78.6 163 39.9
CAN.G650.28 Capsicum annuum HOM05D006343 ORTHO05D005694 1.2e-12 78.2 266 32.0
FAN01G0301 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.2e-12 78.2 364 26.6
MD01G1067400 Malus domestica HOM05D006343 ORTHO05D005694 1.2e-12 78.2 353 26.1
FAN03G1311 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.8e-12 77.0 357 28.3
Sp6g00380 Schrenkiella parvula HOM05D012121 ORTHO05D005694 2.8e-12 77.0 333 27.6
FAN10G3545 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.7e-12 76.3 360 27.5
FAN10G3557 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.1e-11 75.1 359 27.6
DCAR_015701 Daucus carota HOM05D006343 ORTHO05D005694 1.4e-11 74.7 324 28.7
Thhalv10028840m.g Eutrema salsugineum HOM05D012121 ORTHO05D005694 4.0e-11 73.2 337 27.0
THA.LOC104825850 Tarenaya hassleriana HOM05D012121 ORTHO05D005694 4.0e-11 73.2 353 30.3
QL04p054168 Quercus lobata HOM05D006343 ORTHO05D005694 1.5e-10 71.2 280 25.0
COL.COLO4_12739 Corchorus olitorius HOM05D006343 ORTHO05D005694 2.0e-10 70.9 333 26.7
Eucgr.I00992 Eucalyptus grandis HOM05D006343 ORTHO05D005694 2.0e-10 70.9 344 29.1
FvH4_7g14870 Fragaria vesca HOM05D006343 ORTHO05D005694 2.0e-10 70.9 350 27.7
FvH4_7g14980 Fragaria vesca HOM05D006343 ORTHO05D005694 2.0e-10 70.9 368 26.1
FAN06G0921 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.0e-10 70.9 368 26.1
Lj3g0021957 Lotus japonicus HOM05D006343 ORTHO05D005694 3.4e-10 70.1 371 27.8
FAN03G1905 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.4e-10 69.7 351 25.6
Lalb_Chr17g0339411 Lupinus albus HOM05D006343 ORTHO05D005694 5.8e-10 69.3 342 26.9
BcaB01g02239 Brassica carinata HOM05D012121 ORTHO05D005694 7.6e-10 68.9 345 26.4
AT4G00310 Arabidopsis thaliana HOM05D012121 ORTHO05D005694 2.2e-09 67.4 339 27.4
Duzib138G0695 Durio zibethinus HOM05D006343 ORTHO05D005694 3.8e-09 66.6 333 27.6
Sed0018743 Sechium edule HOM05D006343 ORTHO05D005694 3.8e-09 66.6 324 32.4
AL6G53170 Arabidopsis lyrata HOM05D012121 ORTHO05D005694 4.9e-09 66.2 341 29.0
Actinidia10044 Actinidia chinensis HOM05D006343 ORTHO05D005694 6.4e-09 65.9 111 45.0
CARHR248400 Cardamine hirsuta HOM05D012121 ORTHO05D005694 6.4e-09 65.9 346 27.7
FAN06G0140 Fragaria x ananassa HOM05D006343 ORTHO05D005694 8.4e-09 65.5 348 26.4
FAN06G4353 Fragaria x ananassa HOM05D006343 ORTHO05D005694 8.4e-09 65.5 351 27.4
Aqoxy7G00256 Aquilegia oxysepala HOM05D006343 ORTHO05D005694 1.1e-08 65.1 369 25.2
Potri.014G099800 Populus trichocarpa HOM05D006343 ORTHO05D005694 2.4e-08 63.9 301 25.2
PGSC0003DMG400008290 Solanum tuberosum HOM05D006343 ORTHO05D005694 4.2e-08 63.2 166 31.9
Cpa.g.sc11.35 Carica papaya HOM05D006343 ORTHO05D005694 5.4e-08 62.8 344 28.2
TWI23G0998 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 5.4e-08 62.8 327 28.7
Zm00001eb047010 Zea mays HOM05D024295 ORTHO05D020951 1.6e-07 61.2 219 26.9
EL10Ac1g00388 Beta vulgaris HOM05D029301 ORTHO05D005694 4.6e-07 59.7 121 44.6
C09p00270 Brassica napus HOM05D012121 ORTHO05D005694 1.0e-06 58.5 338 24.0
Gorai.007G101600 Gossypium raimondii HOM05D006343 ORTHO05D005694 1.0e-06 58.5 318 26.4
ClCG06G003540 Citrullus lanatus HOM05D006343 ORTHO05D005694 1.3e-06 58.2 41 65.9
DCAR_015699 Daucus carota HOM05D006343 ORTHO05D005694 3.0e-06 57.0 160 35.0
Gohir.D11G095300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 3.0e-06 57.0 321 26.8
PGR042G0313 Punica granatum HOM05D006343 ORTHO05D005694 3.0e-06 57.0 201 28.9
BcaC04g24184 Brassica carinata HOM05D012121 ORTHO05D005694 3.9e-06 56.6 336 24.7
BolC9t52962H Brassica oleracea HOM05D012121 ORTHO05D005694 3.9e-06 56.6 336 24.7


User provided reference genes

Program Settings