Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00542 Striga asiatica HOM05D007181 ORTHO05D008722 3.8e-112 408.3 225 100.0
SalBow4G0298 Salvia bowleyana HOM05D007181 ORTHO05D008722 6.8e-69 264.6 211 71.1
SalBow4G3342 Salvia bowleyana HOM05D007181 ORTHO05D008722 6.8e-69 264.6 211 71.1
SalBow6G6987 Salvia bowleyana HOM05D007181 ORTHO05D008722 8.9e-69 264.2 206 71.4
Nitab4.5_0003555g0080 Nicotiana tabacum HOM05D007181 ORTHO05D008722 6.0e-49 198.4 214 52.8
CAN.G575.12 Capsicum annuum HOM05D007181 ORTHO05D008722 1.6e-46 190.3 213 50.7
PGSC0003DMG400004278 Solanum tuberosum HOM05D007181 ORTHO05D008722 1.6e-46 190.3 210 48.6
Cc00_g18800 Coffea canephora HOM05D007181 ORTHO05D008722 2.1e-46 189.9 227 52.0
Peaxi162Scf00146g10111 Petunia axillaris HOM05D007181 ORTHO05D008722 3.4e-44 182.6 215 50.2
Oeu025775.1 Olea europaea HOM05D007181 ORTHO05D008722 5.8e-44 181.8 149 69.8
Sopen12g034950 Solanum pennellii HOM05D007181 ORTHO05D008722 1.3e-43 180.6 205 46.8
Dinv32881 Davidia involucrata HOM05D007181 ORTHO05D008722 4.9e-43 178.7 220 55.5
Solyc12g100320.2 Solanum lycopersicum HOM05D007181 ORTHO05D008722 8.4e-43 177.9 201 46.8
Actinidia19968 Actinidia chinensis HOM05D007181 ORTHO05D008722 1.9e-39 166.8 204 43.6
Hma1.2p1_0760F.1_g214120 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 1.9e-39 166.8 204 44.6
CSS0010421 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 6.3e-38 161.8 196 43.4
CSS0018066 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 1.1e-37 161.0 203 41.9
Lsat_1_v5_gn_5_185100 Lactuca sativa HOM05D007181 ORTHO05D008722 1.4e-37 160.6 212 47.2
Duzib211G0516 Durio zibethinus HOM05D007181 ORTHO05D008722 4.1e-37 159.1 145 67.6
Potri.002G047400 Populus trichocarpa HOM05D007181 ORTHO05D008722 4.1e-37 159.1 202 42.6
Sabra02G0038300 Salix brachista HOM05D007181 ORTHO05D008722 6.9e-37 158.3 175 44.0
GSVIVG01003131001 Vitis vinifera HOM05D007181 ORTHO05D008722 1.2e-36 157.5 208 47.6
arahy.Tifrunner.gnm1.ann1.M9RGYA Arachis hypogaea HOM05D007181 ORTHO05D008722 3.4e-36 156.0 183 48.6
Haze_04637 Corylus avellana HOM05D000129 ORTHO05D000144 4.5e-36 155.6 139 61.2
Gorai.004G217700 Gossypium raimondii HOM05D007181 ORTHO05D008722 5.9e-36 155.2 144 56.9
Gohir.D11G094500 Gossypium hirsutum HOM05D007181 ORTHO05D008722 7.6e-36 154.8 109 67.0
Haze_04636 Corylus avellana HOM05D007181 ORTHO05D008722 1.0e-35 154.5 139 61.2
Gorai.007G100900 Gossypium raimondii HOM05D007181 ORTHO05D008722 2.9e-35 152.9 143 60.8
Gohir.D08G205700 Gossypium hirsutum HOM05D007181 ORTHO05D008722 5.0e-35 152.1 144 58.3
CANSAT25G0029 Cannabis sativa HOM05D007181 ORTHO05D008722 6.5e-35 151.8 145 52.4
CiPaw.08G110300 Carya illinoinensis HOM05D007181 ORTHO05D008722 8.4e-35 151.4 142 64.8
Thecc.01G270500 Theobroma cacao HOM05D007181 ORTHO05D008722 1.4e-34 150.6 148 58.1
COL.COLO4_09179 Corchorus olitorius HOM05D007181 ORTHO05D008722 1.9e-34 150.2 110 65.5
Manes.05G082200 Manihot esculenta HOM05D007181 ORTHO05D008722 4.2e-34 149.1 107 62.6
Prupe.8G234100 Prunus persica HOM05D007181 ORTHO05D008722 4.2e-34 149.1 134 59.7
CDE06G2554 Ceratophyllum demersum HOM05D007181 ORTHO05D008722 1.2e-33 147.5 196 49.0
Glyma.19G160000 Glycine max HOM05D007181 ORTHO05D008722 2.7e-33 146.4 167 55.7
Atru.chr5.1530 Acer truncatum HOM05D007181 ORTHO05D008722 4.6e-33 145.6 135 63.0
Gohir.A05G078500 Gossypium hirsutum HOM05D000144 ORTHO05D008722 4.6e-33 145.6 109 62.4
Hma1.2p1_1332F.1_g276040 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 6.1e-33 145.2 204 40.2
Lj1g0009574 Lotus japonicus HOM05D007181 ORTHO05D008722 7.9e-33 144.8 158 47.5
MBI13_g01691_MAGBIO Magnolia biondii HOM05D007181 ORTHO05D008722 7.9e-33 144.8 138 55.1
Nn8g40635 Nelumbo nucifera HOM05D007181 ORTHO05D008722 1.8e-32 143.7 198 47.5
VMungo1383G2224 Vigna mungo HOM05D007181 ORTHO05D008722 2.3e-32 143.3 158 52.5
Ciclev10022317m.g Citrus clementina HOM05D007181 ORTHO05D008722 3.9e-32 142.5 200 46.0
vmacro02617 Vaccinium macrocarpon HOM05D007181 ORTHO05D008722 3.9e-32 142.5 200 42.0
Medtr7g095740 Medicago truncatula HOM05D007181 ORTHO05D008722 5.1e-32 142.1 146 62.3
Nn8g40634 Nelumbo nucifera HOM05D007181 ORTHO05D008722 5.1e-32 142.1 140 57.1
HanXRQChr01g0005991 Helianthus annuus HOM05D007181 ORTHO05D008722 8.7e-32 141.4 197 46.2
Sed0014767 Sechium edule HOM05D007181 ORTHO05D008722 1.9e-31 140.2 109 59.6
MELO3C001156.2 Cucumis melo HOM05D007181 ORTHO05D008722 2.5e-31 139.8 109 57.8
Lj2P1163T10 Lonicera japonica HOM05D007181 ORTHO05D008722 2.5e-31 139.8 184 44.0
Gohir.A11G090066 Gossypium hirsutum HOM05D007181 ORTHO05D008722 4.3e-31 139.0 144 56.9
MD03G1257200 Malus domestica HOM05D007181 ORTHO05D008722 4.3e-31 139.0 105 57.1
Phvul.001G155300 Phaseolus vulgaris HOM05D007181 ORTHO05D008722 4.3e-31 139.0 157 52.2
FvH4_2g22890 Fragaria vesca HOM05D007181 ORTHO05D008722 5.7e-31 138.7 109 59.6
ClCG07G000510 Citrullus lanatus HOM05D007181 ORTHO05D008722 9.7e-31 137.9 118 55.9
RcHm_v2.0_Chr6g0289821 Rosa chinensis HOM05D007181 ORTHO05D008722 9.7e-31 137.9 113 56.6
Aa31LG10G17220 Aethionema arabicum HOM05D007181 ORTHO05D008722 1.3e-30 137.5 143 61.5
C08p38020 Brassica napus HOM05D007181 ORTHO05D008722 1.6e-30 137.1 175 45.7
BolC8t51376H Brassica oleracea HOM05D007181 ORTHO05D008722 1.6e-30 137.1 175 45.7
Gohir.A08G187400 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.6e-30 137.1 144 56.2
TPR.G19095 Trifolium pratense HOM05D007181 ORTHO05D008722 3.7e-30 136.0 146 61.0
BraA09t40915Z Brassica rapa HOM05D007181 ORTHO05D008722 6.3e-30 135.2 174 46.0
Cpa.g.sc52.129 Carica papaya HOM05D007181 ORTHO05D008722 6.3e-30 135.2 108 60.2
Ah.11g050140 Amaranthus hybridus HOM05D007181 ORTHO05D008722 8.2e-30 134.8 206 40.8
Ca_20981_v3 Cicer arietinum L. HOM05D007181 ORTHO05D008722 8.2e-30 134.8 171 53.8
BcaC07g40807 Brassica carinata HOM05D007181 ORTHO05D008722 1.4e-29 134.0 136 52.9
CsaV3_2G013840 Cucumis sativus L. HOM05D007181 ORTHO05D008722 1.4e-29 134.0 106 55.7
PSO210G2070 Papaver somniferum HOM05D007181 ORTHO05D008722 1.4e-29 134.0 107 60.7
PSO210G2677 Papaver somniferum HOM05D007181 ORTHO05D008722 1.8e-29 133.7 107 60.7
PGR044G0699 Punica granatum HOM05D007181 ORTHO05D008722 1.8e-29 133.7 107 58.9
THA.LOC104817569 Tarenaya hassleriana HOM05D007181 ORTHO05D008722 2.4e-29 133.3 109 58.7
A09p55080 Brassica napus HOM05D007181 ORTHO05D008722 4.1e-29 132.5 136 52.9
AUR62032277 Chenopodium quinoa HOM05D007181 ORTHO05D008722 4.1e-29 132.5 110 56.4
Aqoxy7G04176 Aquilegia oxysepala HOM05D007181 ORTHO05D008722 5.3e-29 132.1 136 49.3
Thhalv10006272m.g Eutrema salsugineum HOM05D007181 ORTHO05D008722 5.3e-29 132.1 179 49.7
HPP92_028259 Vanilla planifolia HOM05D007181 ORTHO05D008722 5.3e-29 132.1 113 55.8
EL10Ac5g10486 Beta vulgaris HOM05D007181 ORTHO05D008722 6.9e-29 131.7 117 56.4
BcaB03g13697 Brassica carinata HOM05D007181 ORTHO05D008722 6.9e-29 131.7 136 60.3
Sp5g00160 Schrenkiella parvula HOM05D007181 ORTHO05D008722 2.6e-28 129.8 136 55.9
QL12p042395 Quercus lobata HOM05D007181 ORTHO05D008722 6.5e-27 125.2 204 48.0
Rhsim13G0029700 Rhododendron simsii HOM05D007181 ORTHO05D008722 6.5e-27 125.2 204 39.7
AUR62011964 Chenopodium quinoa HOM05D007181 ORTHO05D008722 8.5e-27 124.8 110 54.5
Os11g0616200 Oryza sativa ssp. japonica HOM05D007181 ORTHO05D008722 4.2e-26 122.5 145 60.7
SEGI_03897 Sequoiadendron giganteum HOM05D007181 ORTHO05D008722 9.4e-26 121.3 137 51.1
MD11G1277900 Malus domestica HOM05D007181 ORTHO05D008722 1.2e-25 120.9 86 61.6
Sc05g0001150 Simmondsia chinensis HOM05D007181 ORTHO05D008722 1.6e-25 120.6 217 46.1
AT3G63390 Arabidopsis thaliana HOM05D007181 ORTHO05D008722 3.6e-25 119.4 163 53.4
SHI10021 Sapria himalayana HOM05D007181 ORTHO05D008722 4.6e-25 119.0 109 54.1
AL5G46250 Arabidopsis lyrata HOM05D007181 ORTHO05D008722 1.0e-24 117.9 158 46.8
CARHR291580 Cardamine hirsuta HOM05D007181 ORTHO05D008722 3.9e-24 115.9 103 53.4
AagrBONN_evm.TU.Sc2ySwM_362.2054 Anthoceros agrestis HOM05D007181 ORTHO05D008722 1.3e-22 110.9 122 49.2
Zm00001eb166760 Zea mays HOM05D007181 ORTHO05D008722 9.1e-21 104.8 111 52.3
Pp3c24_16150 Physcomitrium patens HOM05D007181 ORTHO05D008722 1.2e-20 104.4 144 36.1
Carub.0005s3001 Capsella rubella HOM05D007181 ORTHO05D008722 1.5e-20 104.0 158 39.2
FAN24G0107 Fragaria x ananassa HOM05D007181 ORTHO05D008722 5.9e-20 102.1 109 50.5
Pp3c8_19140 Physcomitrium patens HOM05D007181 ORTHO05D008722 1.3e-19 100.9 140 35.7
SMO143G0136 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 2.2e-19 100.1 105 48.6
Mapoly0126s0033 Marchantia polymorpha HOM05D007181 ORTHO05D008722 1.8e-16 90.5 106 46.2
TAR624G0264 Trochodendron aralioides HOM05D007181 ORTHO05D008722 3.7e-14 82.8 67 56.7
Psat3g061320 Pisum sativum HOM05D007181 ORTHO05D008722 6.3e-14 82.0 74 56.8
SMO203G0031 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 5.0e-11 72.4 60 51.7
ATR0099G083 Amborella trichopoda HOM05D007181 ORTHO05D008722 6.5e-11 72.0 62 56.5
VMungo1215G0236 Vigna mungo HOM05D007181 ORTHO05D008722 8.5e-11 71.6 117 36.8
BcaC07g42693 Brassica carinata HOM05D007181 ORTHO05D008722 2.1e-09 67.0 105 40.0
ATR0099G072 Amborella trichopoda HOM05D007181 ORTHO05D008722 6.1e-09 65.5 72 62.5
SMO203G0072 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 4.0e-08 62.8 61 49.2
CBR_g39816 Chara braunii HOM05D007181 ORTHO05D008722 5.2e-08 62.4 128 35.9


User provided reference genes

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