Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 6.8e-59 231.1 182 100.0
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 3.4e-42 175.6 189 70.4
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 1.7e-38 163.3 185 56.2
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 1.6e-36 156.8 188 52.7
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 4.9e-33 145.2 182 49.5
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 1.1e-32 144.1 186 51.6
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 1.1e-32 144.1 183 49.7
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 3.2e-32 142.5 182 48.4
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 3.2e-32 142.5 129 81.4
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 3.2e-32 142.5 138 60.9
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 4.1e-32 142.1 132 62.1
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 1.6e-31 140.2 191 49.2
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 2.1e-31 139.8 190 48.4
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 1.0e-30 137.5 137 59.9
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 1.0e-30 137.5 138 68.8
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 1.3e-30 137.1 183 48.1
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 1.3e-30 137.1 185 47.6
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 2.3e-30 136.3 185 48.6
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 6.6e-30 134.8 183 54.1
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 8.6e-30 134.4 182 48.4
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 8.6e-30 134.4 182 48.4
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 1.5e-29 133.7 182 58.2
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 1.5e-29 133.7 184 54.9
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 2.5e-29 132.9 187 48.1
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 2.5e-29 132.9 182 60.4
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 4.3e-29 132.1 132 59.1
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 4.3e-29 132.1 193 45.6
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 1.2e-28 130.6 182 59.9
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 1.6e-28 130.2 138 56.5
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 1.6e-28 130.2 137 56.9
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 2.1e-28 129.8 135 57.0
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 2.1e-28 129.8 183 47.0
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 2.8e-28 129.4 132 58.3
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 2.8e-28 129.4 136 57.4
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 2.8e-28 129.4 191 51.3
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 2.8e-28 129.4 136 56.6
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 2.8e-28 129.4 187 44.4
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 2.8e-28 129.4 186 50.0
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 4.7e-28 128.6 193 50.8
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 6.2e-28 128.3 181 58.0
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 8.1e-28 127.9 192 57.8
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 1.1e-27 127.5 128 59.4
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 1.1e-27 127.5 137 56.2
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 1.4e-27 127.1 182 46.7
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 1.8e-27 126.7 183 45.9
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 1.8e-27 126.7 190 56.3
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 2.4e-27 126.3 132 54.5
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 5.2e-27 125.2 190 42.6
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 5.2e-27 125.2 136 54.4
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 5.2e-27 125.2 132 55.3
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 6.9e-27 124.8 182 51.6
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 6.9e-27 124.8 186 53.2
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 1.5e-26 123.6 190 42.6
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 1.5e-26 123.6 138 66.7
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 1.5e-26 123.6 183 46.4
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 2.6e-26 122.9 183 43.7
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 3.4e-26 122.5 191 44.5
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 5.8e-26 121.7 127 57.5
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 7.6e-26 121.3 133 54.1
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 9.9e-26 120.9 132 55.3
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 4.9e-25 118.6 135 60.0
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 2.4e-24 116.3 190 43.7
SGA_v2.0_scaffold90G27801 Striga asiatica HOM05D000069 ORTHO05D399115 5.4e-24 115.2 134 87.3
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 1.6e-23 113.6 193 48.2
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 1.6e-23 113.6 187 42.8
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 2.3e-22 109.8 132 59.1
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 2.3e-22 109.8 132 50.8
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 3.9e-22 109.0 133 50.4
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 3.9e-22 109.0 132 50.8
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 5.1e-22 108.6 132 47.7
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 1.5e-21 107.1 186 43.0
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 2.5e-21 106.3 133 49.6
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 2.5e-21 106.3 138 52.2
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 2.5e-21 106.3 194 40.7
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 3.3e-21 105.9 133 50.4
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 3.3e-21 105.9 133 50.4
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 3.3e-21 105.9 133 50.4
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 3.3e-21 105.9 133 50.4
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 3.3e-21 105.9 133 50.4
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 4.3e-21 105.5 132 48.5
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 5.6e-21 105.1 122 53.3
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 7.3e-21 104.8 134 51.5
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 7.3e-21 104.8 186 49.5
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 9.6e-21 104.4 133 50.4
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 1.3e-20 104.0 133 48.9
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 2.1e-20 103.2 150 51.3
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 2.8e-20 102.8 132 47.0
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 4.8e-20 102.1 136 47.8
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 8.1e-20 101.3 154 50.6
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 3.1e-19 99.4 188 46.3
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 3.1e-19 99.4 187 50.3
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 4.0e-19 99.0 199 43.7
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 2.0e-18 96.7 185 44.9
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.7e-17 93.6 132 53.8
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 1.7e-17 93.6 143 55.2
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 7.1e-16 88.2 184 45.7
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 2.1e-15 86.7 129 42.6
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 3.5e-15 85.9 138 56.5
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 3.5e-15 85.9 137 52.6
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 1.3e-14 84.0 138 53.6
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 6.7e-14 81.6 138 52.9
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 1.6e-12 77.0 138 40.6
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 6.9e-11 71.6 190 34.2
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 1.3e-09 67.4 189 40.2


User provided reference genes

Program Settings