Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00497 Striga asiatica HOM05D004016 ORTHO05D004732 3.8e-118 428.3 238 100.0
SGA_v2.0_scaffold138G35322 Striga asiatica HOM05D004016 ORTHO05D004732 7.5e-82 307.8 231 78.4
MSTRG.21548 Avicennia marina HOM05D004016 ORTHO05D004732 4.0e-59 232.3 239 55.2
Migut.D00318 Erythranthe guttata HOM05D004016 ORTHO05D004732 7.5e-58 228.0 240 55.8
MSTRG.18246 Avicennia marina HOM05D004016 ORTHO05D004732 2.2e-49 199.9 241 50.2
Oeu040656.1 Olea europaea HOM05D004016 ORTHO05D004732 5.4e-48 195.3 244 49.2
Cc01_g19290 Coffea canephora HOM05D004016 ORTHO05D004732 3.5e-47 192.6 254 50.4
Migut.N02038 Erythranthe guttata HOM05D004016 ORTHO05D004732 1.1e-43 181.0 193 53.4
Dinv32914 Davidia involucrata HOM05D004016 ORTHO05D004732 2.0e-42 176.8 247 48.6
Lj2E1169T0 Lonicera japonica HOM05D004016 ORTHO05D004732 2.6e-42 176.4 248 47.2
Oeu028065.1 Olea europaea HOM05D004016 ORTHO05D004732 4.4e-42 175.6 245 46.5
Oeu025739.1 Olea europaea HOM05D004016 ORTHO05D004732 2.9e-41 172.9 245 47.8
MSTRG.17454 Avicennia marina HOM05D004016 ORTHO05D004732 3.5e-39 166.0 237 44.7
Solyc09g065380.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 3.5e-39 166.0 208 48.6
Hma1.2p1_0667F.1_g199710 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 1.0e-38 164.5 249 46.6
PGSC0003DMG400019358 Solanum tuberosum HOM05D004016 ORTHO05D004732 1.0e-38 164.5 208 48.1
Sopen09g027150 Solanum pennellii HOM05D004016 ORTHO05D004732 3.0e-38 162.9 208 48.1
CAN.G1549.22 Capsicum annuum HOM05D004016 ORTHO05D004732 6.6e-38 161.8 206 46.1
Lj1C48T4 Lonicera japonica HOM05D004016 ORTHO05D004732 6.6e-38 161.8 247 44.9
CAN.G1549.21 Capsicum annuum HOM05D004016 ORTHO05D004732 1.5e-37 160.6 206 45.6
Nitab4.5_0008064g0020 Nicotiana tabacum HOM05D004016 ORTHO05D004732 1.5e-37 160.6 241 42.7
Nitab4.5_0005172g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 5.6e-37 158.7 251 43.0
Sopen06g035580 Solanum pennellii HOM05D004016 ORTHO05D004732 2.1e-36 156.8 206 45.1
CAN.G1549.11 Capsicum annuum HOM05D004016 ORTHO05D004732 2.8e-36 156.4 253 40.7
Nitab4.5_0002928g0010 Nicotiana tabacum HOM05D004016 ORTHO05D004732 3.6e-36 156.0 197 47.2
Solyc06g084200.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 3.6e-36 156.0 206 45.6
FvH4_2g23281 Fragaria vesca HOM05D004016 ORTHO05D004732 6.2e-36 155.2 205 47.8
FAN24G3262 Fragaria x ananassa HOM05D004016 ORTHO05D004732 1.4e-35 154.1 205 47.8
Hma1.2p1_0822F.1_g224340 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 1.8e-35 153.7 246 42.3
Manes.05G079900 Manihot esculenta HOM05D004016 ORTHO05D004732 3.1e-35 152.9 255 42.0
Ah.02g110900 Amaranthus hybridus HOM05D004016 ORTHO05D004732 4.0e-35 152.5 250 43.6
FAN20G3152 Fragaria x ananassa HOM05D004016 ORTHO05D004732 5.2e-35 152.1 206 48.5
PGSC0003DMG400020056 Solanum tuberosum HOM05D004016 ORTHO05D004732 1.2e-34 151.0 206 45.1
Peaxi162Scf00783g00017 Petunia axillaris HOM05D004016 ORTHO05D004732 2.6e-34 149.8 257 39.7
Manes.01G206100 Manihot esculenta HOM05D004016 ORTHO05D004732 5.8e-34 148.7 255 44.3
COL.COLO4_09066 Corchorus olitorius HOM05D004016 ORTHO05D004732 7.6e-34 148.3 256 44.1
EL10Ac5g10544 Beta vulgaris HOM05D004016 ORTHO05D004732 1.7e-33 147.1 248 41.5
Nitab4.5_0009529g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 1.7e-33 147.1 180 47.8
Duzib138G0182 Durio zibethinus HOM05D004016 ORTHO05D004732 2.9e-33 146.4 249 45.4
Gohir.A08G065500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.9e-33 146.4 250 44.8
Haze_04687 Corylus avellana HOM05D004016 ORTHO05D004732 3.8e-33 146.0 246 42.7
AUR62028601 Chenopodium quinoa HOM05D004016 ORTHO05D004732 4.9e-33 145.6 252 42.1
FAN15G1959 Fragaria x ananassa HOM05D004016 ORTHO05D004732 4.9e-33 145.6 203 47.8
Oeu034146.1 Olea europaea HOM05D004016 ORTHO05D004732 4.9e-33 145.6 180 48.9
Oeu013891.1 Olea europaea HOM05D004016 ORTHO05D004732 6.4e-33 145.2 169 50.3
vmacro14911 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 6.4e-33 145.2 245 43.3
Prupe.8G238400 Prunus persica HOM05D004016 ORTHO05D004732 8.4e-33 144.8 249 42.2
Potri.005G211400 Populus trichocarpa HOM05D004016 ORTHO05D004732 1.1e-32 144.4 199 48.2
Ciclev10022155m.g Citrus clementina HOM05D004016 ORTHO05D004732 1.4e-32 144.1 258 41.5
Lsat_1_v5_gn_8_56660 Lactuca sativa HOM05D004016 ORTHO05D004732 1.4e-32 144.1 256 42.2
Gohir.D08G074000 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.4e-32 143.3 250 44.4
Gorai.004G078400 Gossypium raimondii HOM05D004016 ORTHO05D004732 2.4e-32 143.3 250 44.4
arahy.Tifrunner.gnm1.ann1.256EAD Arachis hypogaea HOM05D004016 ORTHO05D004732 3.2e-32 142.9 205 47.3
FAN27G2694 Fragaria x ananassa HOM05D004016 ORTHO05D004732 4.2e-32 142.5 203 46.3
Actinidia21126 Actinidia chinensis HOM05D004016 ORTHO05D004732 7.1e-32 141.7 245 42.4
Ca_09744_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 9.2e-32 141.4 243 42.0
Sc05g0001440 Simmondsia chinensis HOM05D004016 ORTHO05D004732 9.2e-32 141.4 240 41.7
Peaxi162Scf01248g00010 Petunia axillaris HOM05D004016 ORTHO05D004732 1.2e-31 141.0 241 40.7
MD03G1262100 Malus domestica HOM05D004016 ORTHO05D004732 1.6e-31 140.6 251 42.6
Cfa006163 Carpinus fangiana HOM05D004016 ORTHO05D004732 2.1e-31 140.2 246 41.1
Potri.002G050900 Populus trichocarpa HOM05D004016 ORTHO05D004732 2.1e-31 140.2 259 42.1
Eucgr.H01463 Eucalyptus grandis HOM05D004016 ORTHO05D004732 2.7e-31 139.8 247 42.1
TAR633G2817 Trochodendron aralioides HOM05D004016 ORTHO05D004732 7.8e-31 138.3 184 48.4
Cpa.g.sc487.4 Carica papaya HOM05D004016 ORTHO05D004732 1.0e-30 137.9 256 40.6
Rhsim01G0273500 Rhododendron simsii HOM05D004016 ORTHO05D004732 1.7e-30 137.1 247 43.3
RcHm_v2.0_Chr6g0290651 Rosa chinensis HOM05D004016 ORTHO05D004732 1.7e-30 137.1 261 41.4
Gorai.004G216600 Gossypium raimondii HOM05D004016 ORTHO05D004732 2.3e-30 136.7 242 42.6
Aqoxy5G00450 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 3.0e-30 136.3 190 48.9
Glyma.10G027800 Glycine max HOM05D004016 ORTHO05D004732 3.9e-30 136.0 181 45.3
MD11G1282800 Malus domestica HOM05D004016 ORTHO05D004732 5.1e-30 135.6 250 41.2
Sabra02G0041700 Salix brachista HOM05D004016 ORTHO05D004732 5.1e-30 135.6 259 41.3
TWI18G0383 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 6.6e-30 135.2 250 40.0
Gohir.D08G204600 Gossypium hirsutum HOM05D004016 ORTHO05D004732 8.7e-30 134.8 242 42.6
Atru.chr5.1471 Acer truncatum HOM05D004016 ORTHO05D004732 1.1e-29 134.4 262 42.0
Gohir.A08G186500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.5e-29 134.0 238 40.8
Sabra05G0161500 Salix brachista HOM05D004016 ORTHO05D004732 1.5e-29 134.0 255 40.4
Duzib133G1129 Durio zibethinus HOM05D004016 ORTHO05D004732 2.5e-29 133.3 250 41.2
unitig_0.g129 Utricularia gibba HOM05D004016 ORTHO05D004732 4.3e-29 132.5 145 51.7
Gohir.A11G124100 Gossypium hirsutum HOM05D004016 ORTHO05D004732 5.6e-29 132.1 248 41.5
Thecc.01G275600 Theobroma cacao HOM05D004016 ORTHO05D004732 5.6e-29 132.1 256 41.4
TAR636G0684 Trochodendron aralioides HOM05D004016 ORTHO05D004732 5.6e-29 132.1 197 48.2
HanXRQChr04g0118991 Helianthus annuus HOM05D004016 ORTHO05D004732 7.3e-29 131.7 255 38.8
Hund02825 Selenicereus undatus HOM05D004016 ORTHO05D004732 7.3e-29 131.7 192 45.8
VMungo1383G1854 Vigna mungo HOM05D004016 ORTHO05D004732 9.6e-29 131.3 204 44.1
Lalb_Chr02g0142631 Lupinus albus HOM05D004016 ORTHO05D004732 1.6e-28 130.6 195 44.6
TWI12G1445 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 1.6e-28 130.6 248 40.7
CiPaw.08G107200 Carya illinoinensis HOM05D004016 ORTHO05D004732 3.6e-28 129.4 185 45.9
Lj1g0004863 Lotus japonicus HOM05D004016 ORTHO05D004732 3.6e-28 129.4 251 38.6
LjContig00056g0010505 Lotus japonicus HOM05D004016 ORTHO05D004732 3.6e-28 129.4 251 38.6
Sc17g0001350 Simmondsia chinensis HOM05D004016 ORTHO05D004732 6.2e-28 128.6 240 40.8
Hund27940 Selenicereus undatus HOM05D004016 ORTHO05D004732 1.1e-27 127.9 190 45.3
Gorai.007G138300 Gossypium raimondii HOM05D004016 ORTHO05D004732 3.1e-27 126.3 247 40.9
Psat3g063280 Pisum sativum HOM05D004016 ORTHO05D004732 3.1e-27 126.3 206 44.7
Ca_08613_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 9.0e-27 124.8 193 46.1
Lalb_Chr21g0306401 Lupinus albus HOM05D004016 ORTHO05D004732 1.2e-26 124.4 184 45.1
Medtr7g095160 Medicago truncatula HOM05D004016 ORTHO05D004732 1.2e-26 124.4 185 42.2
DCAR_002723 Daucus carota HOM05D004016 ORTHO05D004732 1.5e-26 124.0 258 37.2
Phvul.001G153100 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 1.5e-26 124.0 204 42.6
THA.LOC104825992 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 2.6e-26 123.2 257 38.5
PGR044G0005 Punica granatum HOM05D004016 ORTHO05D004732 3.4e-26 122.9 247 38.9
Gohir.D11G129300 Gossypium hirsutum HOM05D004016 ORTHO05D004732 7.6e-26 121.7 247 39.7
Glyma.02G146200 Glycine max HOM05D004016 ORTHO05D004732 1.3e-25 120.9 186 44.1
Lalb_Chr06g0162891 Lupinus albus HOM05D004016 ORTHO05D004732 1.3e-25 120.9 195 43.6
Lj5g0005099 Lotus japonicus HOM05D004016 ORTHO05D004732 1.7e-25 120.6 190 41.1
Aa31LG5G2350 Aethionema arabicum HOM05D004016 ORTHO05D004732 2.2e-25 120.2 249 36.5
Actinidia24906 Actinidia chinensis HOM05D004016 ORTHO05D004732 3.8e-25 119.4 167 46.7
Phvul.007G173300 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 4.9e-25 119.0 187 43.3
Glyma.03G155700 Glycine max HOM05D004016 ORTHO05D004732 6.4e-25 118.6 182 45.1
TPR.G27140 Trifolium pratense HOM05D004016 ORTHO05D004732 6.4e-25 118.6 193 43.0
vmacro02591 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 8.4e-25 118.2 204 43.6
Rhsim13G0026600 Rhododendron simsii HOM05D004016 ORTHO05D004732 1.4e-24 117.5 145 49.0
THA.LOC104801244 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 1.4e-24 117.5 242 38.0
ClCG07G000350 Citrullus lanatus HOM05D004016 ORTHO05D004732 2.4e-24 116.7 248 39.1
VMungo0720G0880 Vigna mungo HOM05D004016 ORTHO05D004732 4.2e-24 115.9 156 44.9
ECA236G1435 Erigeron canadensis HOM05D004016 ORTHO05D004732 7.1e-24 115.2 239 38.5
CARHR251020 Cardamine hirsuta HOM05D004016 ORTHO05D004732 9.3e-24 114.8 207 41.5
QL12p021105 Quercus lobata HOM05D004016 ORTHO05D004732 9.3e-24 114.8 206 41.7
AT4G02715 Arabidopsis thaliana HOM05D004016 ORTHO05D004732 2.7e-23 113.2 202 41.6
Sp6g02620 Schrenkiella parvula HOM05D004016 ORTHO05D004732 2.7e-23 113.2 202 42.1
Thhalv10028968m.g Eutrema salsugineum HOM05D004016 ORTHO05D004732 3.5e-23 112.8 249 36.1
PSO761G0274 Papaver somniferum HOM05D004016 ORTHO05D004732 7.8e-23 111.7 187 45.5
DCAR_018429 Daucus carota HOM05D004016 ORTHO05D004732 2.3e-22 110.2 279 32.3
Glyma.19G157800 Glycine max HOM05D004016 ORTHO05D004732 5.1e-22 109.0 180 42.8
CsaV3_6G037200 Cucumis sativus L. HOM05D004016 ORTHO05D004732 6.6e-22 108.6 199 42.2
AL6G50300 Arabidopsis lyrata HOM05D004016 ORTHO05D004732 8.7e-22 108.2 202 41.1
MELO3C014394.2 Cucumis melo HOM05D004016 ORTHO05D004732 1.5e-21 107.5 199 42.2
Psat6g059840 Pisum sativum HOM05D004016 ORTHO05D004732 1.9e-21 107.1 193 40.9
BcaB01g02015 Brassica carinata HOM05D004016 ORTHO05D004732 2.5e-21 106.7 242 35.5
Carub.0006s3440 Capsella rubella HOM05D004016 ORTHO05D004732 2.5e-21 106.7 202 38.6
Sed0007164 Sechium edule HOM05D004016 ORTHO05D004732 3.3e-21 106.3 199 39.7
TPR.G24294 Trifolium pratense HOM05D004016 ORTHO05D004732 4.3e-21 105.9 157 42.0
C09p02200 Brassica napus HOM05D004016 ORTHO05D004732 5.6e-21 105.5 191 40.3
Aqoxy2G03410 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 1.6e-20 104.0 181 42.0
BcaB05g23659 Brassica carinata HOM05D004016 ORTHO05D004732 2.8e-20 103.2 253 35.6
PSO210G5515 Papaver somniferum HOM05D004016 ORTHO05D004732 4.8e-20 102.4 186 41.4
BcaC04g24008 Brassica carinata HOM05D004016 ORTHO05D004732 8.1e-20 101.7 190 40.0
BolC9t53149H Brassica oleracea HOM05D004016 ORTHO05D004732 8.1e-20 101.7 190 40.0
A09p02110 Brassica napus HOM05D004016 ORTHO05D004732 2.0e-18 97.1 204 36.8
BraA09t35860Z Brassica rapa HOM05D004016 ORTHO05D004732 4.5e-18 95.9 204 35.3
ECA247G1708 Erigeron canadensis HOM05D004016 ORTHO05D004732 5.8e-18 95.5 176 36.9
HPP92_013967 Vanilla planifolia HOM05D004016 ORTHO05D004732 4.9e-17 92.4 179 41.3
BolC2t09924H Brassica oleracea HOM05D004016 ORTHO05D004732 1.1e-16 91.3 196 37.8
Zm00001eb047890 Zea mays HOM05D004016 ORTHO05D004732 1.4e-16 90.9 153 43.1
BcaC03g16166 Brassica carinata HOM05D004016 ORTHO05D004732 1.9e-16 90.5 191 37.2
C02p39140 Brassica napus HOM05D004016 ORTHO05D004732 1.9e-16 90.5 196 37.8
Medtr1g071810 Medicago truncatula HOM05D004016 ORTHO05D004732 1.9e-16 90.5 74 62.2
ClCG09G007200 Citrullus lanatus HOM05D004016 ORTHO05D004732 2.4e-16 90.1 195 40.0
Os03g0160200 Oryza sativa ssp. japonica HOM05D004016 ORTHO05D004732 2.1e-15 87.0 195 40.0
ATR0697G155 Amborella trichopoda HOM05D004016 ORTHO05D004732 2.7e-15 86.7 268 31.3
Psat1g067520 Pisum sativum HOM05D004016 ORTHO05D004732 4.6e-15 85.9 166 38.6
A02p24930 Brassica napus HOM05D004016 ORTHO05D004732 6.7e-14 82.0 192 36.5
BraA02t07483Z Brassica rapa HOM05D004016 ORTHO05D004732 1.1e-13 81.3 192 36.5
CsaV3_7G027970 Cucumis sativus L. HOM05D004016 ORTHO05D004732 1.9e-13 80.5 136 41.9
Zm00001eb403300 Zea mays HOM05D004016 ORTHO05D004732 4.3e-13 79.3 181 38.1
MELO3C015815.2 Cucumis melo HOM05D004016 ORTHO05D004732 2.1e-12 77.0 93 49.5
A03p30890 Brassica napus HOM05D004016 ORTHO05D004732 1.5e-10 70.9 118 39.0
SEGI_39625 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 1.4e-08 64.3 63 55.6
SEGI_04941 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 9.3e-08 61.6 133 35.3
SMO134G0037 Selaginella moellendorffii HOM05D004016 ORTHO05D004732 1.6e-07 60.8 121 39.7
BcaC01g06738 Brassica carinata HOM05D004016 ORTHO05D004732 2.1e-07 60.5 44 59.1
Gorai.009G456000 Gossypium raimondii HOM05D004016 ORTHO05D004732 2.7e-07 60.1 131 40.5
Sed0001131 Sechium edule HOM05D004016 ORTHO05D004732 1.8e-06 57.4 175 33.7
AagrBONN_evm.TU.Sc2ySwM_362.2843 Anthoceros agrestis HOM05D004016 ORTHO05D004732 3.9e-06 56.2 51 56.9


User provided reference genes

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