Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00469 Striga asiatica HOM05D001001 ORTHO05D000808 5.1e-72 274.2 132 100.0
SGA_v2.0_scaffold265G46095 Striga asiatica HOM05D001001 ORTHO05D000808 4.8e-38 161.4 133 66.2
SGA_v2.0_scaffold155G37206 Striga asiatica HOM05D001001 ORTHO05D000808 6.3e-38 161.0 97 83.5
SGA_v2.0_scaffold109G31075 Striga asiatica HOM05D001001 ORTHO05D000808 2.1e-33 146.0 96 81.2
SGA_v2.0_scaffold8G04632 Striga asiatica HOM05D001001 ORTHO05D000808 4.3e-31 138.3 90 81.1
SGA_v2.0_scaffold94G28676 Striga asiatica HOM05D004125 ORTHO05D004933 3.3e-23 112.1 130 52.3
Migut.D00426 Erythranthe guttata HOM05D001001 ORTHO05D000808 3.4e-20 102.1 101 56.4
unitig_8.g4704 Utricularia gibba HOM05D001001 ORTHO05D000808 4.2e-18 95.1 91 51.6
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 5.5e-18 94.7 136 49.3
Migut.N02205 Erythranthe guttata HOM05D001001 ORTHO05D000808 1.4e-16 90.1 103 53.4
SalBow6G6296 Salvia bowleyana HOM05D001001 ORTHO05D000808 9.7e-15 84.0 75 58.7
PGSC0003DMG400010320 Solanum tuberosum HOM05D001001 ORTHO05D000808 6.3e-14 81.3 79 51.9
unitig_578.g16426 Utricularia gibba HOM05D001001 ORTHO05D000808 8.2e-14 80.9 97 46.4
SalBow4G1542 Salvia bowleyana HOM05D001001 ORTHO05D000808 1.1e-13 80.5 99 47.5
SalBow4G2279 Salvia bowleyana HOM05D001001 ORTHO05D000808 1.1e-13 80.5 99 47.5
Sopen09g028310 Solanum pennellii HOM05D001001 ORTHO05D000808 1.4e-13 80.1 79 51.9
CAN.G896.5 Capsicum annuum HOM05D001001 ORTHO05D000808 2.4e-13 79.3 90 47.8
ECA247G3362 Erigeron canadensis HOM05D001001 ORTHO05D000808 2.4e-13 79.3 86 44.2
Lsat_1_v5_gn_5_183480 Lactuca sativa HOM05D001001 ORTHO05D000808 3.1e-13 79.0 101 44.6
Lsat_1_v5_gn_5_183501 Lactuca sativa HOM05D001001 ORTHO05D000808 3.1e-13 79.0 101 44.6
Rhsim01G0263300 Rhododendron simsii HOM05D001001 ORTHO05D000808 3.1e-13 79.0 95 47.4
Solyc09g025210.3 Solanum lycopersicum HOM05D001001 ORTHO05D000808 3.1e-13 79.0 79 50.6
SGA_v2.0_scaffold1G00617 Striga asiatica HOM05D001001 ORTHO05D000808 3.1e-13 79.0 97 54.6
Peaxi162Scf00018g02017 Petunia axillaris HOM05D001001 ORTHO05D000808 7.0e-13 77.8 95 44.2
Rhsim13G0035100 Rhododendron simsii HOM05D001001 ORTHO05D000808 9.1e-13 77.4 72 52.8
Sopen09g028330 Solanum pennellii HOM05D001001 ORTHO05D000808 9.1e-13 77.4 79 49.4
Dinv34631 Davidia involucrata HOM05D001001 ORTHO05D000808 1.2e-12 77.0 93 47.3
Hma1.2p1_0273F.1_g109680 Hydrangea macrophylla HOM05D001001 ORTHO05D000808 3.5e-12 75.5 90 45.6
Peaxi162Scf00855g00229 Petunia axillaris HOM05D001001 ORTHO05D000808 3.5e-12 75.5 82 47.6
vmacro14821 Vaccinium macrocarpon HOM05D001001 ORTHO05D000808 3.5e-12 75.5 98 45.9
Actinidia25793 Actinidia chinensis HOM05D001001 ORTHO05D000808 4.5e-12 75.1 90 41.1
Nitab4.5_0000470g0120 Nicotiana tabacum HOM05D001001 ORTHO05D000808 7.7e-12 74.3 78 48.7
Nitab4.5_0001855g0070 Nicotiana tabacum HOM05D001001 ORTHO05D000808 7.7e-12 74.3 78 48.7
vmacro02664 Vaccinium macrocarpon HOM05D001001 ORTHO05D000808 7.7e-12 74.3 72 51.4
Rhsim13G0035200 Rhododendron simsii HOM05D001001 ORTHO05D000808 1.0e-11 73.9 80 48.8
vmacro02662 Vaccinium macrocarpon HOM05D001001 ORTHO05D000808 1.0e-11 73.9 72 51.4
Eucgr.B01551 Eucalyptus grandis HOM05D001001 ORTHO05D000808 1.7e-11 73.2 106 45.3
MBI10_g33518_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 2.2e-11 72.8 97 45.4
HanXRQChr07g0196131 Helianthus annuus HOM05D001001 ORTHO05D000808 2.9e-11 72.4 104 41.3
Lj2C1151T4 Lonicera japonica HOM05D001001 ORTHO05D000808 2.9e-11 72.4 63 55.6
HanXRQChr09g0254371 Helianthus annuus HOM05D001001 ORTHO05D000808 5.0e-11 71.6 105 41.0
SGA_v2.0_scaffold2G00875 Striga asiatica HOM05D001001 ORTHO05D000808 5.0e-11 71.6 98 44.9
PSO782G2015 Papaver somniferum HOM05D001001 ORTHO05D000808 6.5e-11 71.2 73 56.2
HanXRQChr10g0280931 Helianthus annuus HOM05D001001 ORTHO05D000808 8.5e-11 70.9 76 48.7
PSO210G1185 Papaver somniferum HOM05D001001 ORTHO05D000808 8.5e-11 70.9 93 44.1
Actinidia39904 Actinidia chinensis HOM05D001001 ORTHO05D000808 1.1e-10 70.5 97 45.4
Dinv34630 Davidia involucrata HOM05D001001 ORTHO05D000808 1.1e-10 70.5 97 48.5
Lsat_1_v5_gn_9_8420 Lactuca sativa HOM05D001001 ORTHO05D000808 1.1e-10 70.5 105 41.9
ECA248G0359 Erigeron canadensis HOM05D001001 ORTHO05D000808 1.5e-10 70.1 94 45.7
PSO675G2126 Papaver somniferum HOM05D001001 ORTHO05D000808 1.5e-10 70.1 77 48.1
SalBow6G3101 Salvia bowleyana HOM05D001001 ORTHO05D000808 1.5e-10 70.1 100 42.0
vmacro02663 Vaccinium macrocarpon HOM05D001001 ORTHO05D000808 1.5e-10 70.1 71 50.7
vmacro14820 Vaccinium macrocarpon HOM05D001001 ORTHO05D000808 1.5e-10 70.1 99 42.4
Ah.11g049760 Amaranthus hybridus HOM05D001001 ORTHO05D000808 1.9e-10 69.7 92 46.7
EL10Ac5g10396 Beta vulgaris HOM05D001001 ORTHO05D000808 1.9e-10 69.7 97 41.2
Rhsim01G0263100 Rhododendron simsii HOM05D001001 ORTHO05D000808 2.5e-10 69.3 68 52.9
Rhsim01G0263200 Rhododendron simsii HOM05D001001 ORTHO05D000808 2.5e-10 69.3 95 44.2
Nitab4.5_0001855g0040 Nicotiana tabacum HOM05D001001 ORTHO05D000808 3.2e-10 68.9 80 45.0
PSO210G7323 Papaver somniferum HOM05D001001 ORTHO05D000808 3.2e-10 68.9 93 46.2
Dinv03578 Davidia involucrata HOM05D001001 ORTHO05D000808 4.2e-10 68.6 73 52.1
Actinidia38941 Actinidia chinensis HOM05D001001 ORTHO05D000808 5.5e-10 68.2 91 46.2
HanXRQChr11g0336761 Helianthus annuus HOM05D001001 ORTHO05D000808 5.5e-10 68.2 89 44.9
PSO478G3033 Papaver somniferum HOM05D001001 ORTHO05D000808 5.5e-10 68.2 72 54.2
Hma1.2p1_0992F.1_g245200 Hydrangea macrophylla HOM05D001001 ORTHO05D000808 7.2e-10 67.8 126 38.1
Nn3g19659 Nelumbo nucifera HOM05D001001 ORTHO05D000808 7.2e-10 67.8 73 50.7
Dinv08270 Davidia involucrata HOM05D001001 ORTHO05D000808 9.4e-10 67.4 87 49.4
vmacro15443 Vaccinium macrocarpon HOM05D001001 ORTHO05D000808 9.4e-10 67.4 100 44.0
ECA248G2272 Erigeron canadensis HOM05D001001 ORTHO05D000808 1.2e-09 67.0 102 41.2
Nitab4.5_0000470g0090 Nicotiana tabacum HOM05D001001 ORTHO05D000808 1.2e-09 67.0 80 45.0
Cfa002429 Carpinus fangiana HOM05D001001 ORTHO05D000808 1.6e-09 66.6 81 48.1
HanXRQChr09g0254381 Helianthus annuus HOM05D001001 ORTHO05D000808 1.6e-09 66.6 101 43.6
Nn1g07603 Nelumbo nucifera HOM05D001001 ORTHO05D000808 1.6e-09 66.6 80 46.2
AUR62024712 Chenopodium quinoa HOM05D001001 ORTHO05D000808 2.1e-09 66.2 90 42.2
Lj1C66T19 Lonicera japonica HOM05D001001 ORTHO05D000808 2.1e-09 66.2 95 42.1
PSO541G3338 Papaver somniferum HOM05D001001 ORTHO05D000808 2.1e-09 66.2 73 54.8
PSO675G7334 Papaver somniferum HOM05D001001 ORTHO05D000808 2.1e-09 66.2 75 50.7
PSO732G0358 Papaver somniferum HOM05D001001 ORTHO05D000808 2.1e-09 66.2 75 50.7
Peaxi162Scf00855g00017 Petunia axillaris HOM05D001001 ORTHO05D000808 2.1e-09 66.2 49 61.2
Ah.02g112000 Amaranthus hybridus HOM05D001790 ORTHO05D003691 2.7e-09 65.9 93 41.9
CAN.G1449.9 Capsicum annuum HOM05D001001 ORTHO05D000808 2.7e-09 65.9 87 42.5
HanXRQChr10g0288971 Helianthus annuus HOM05D001001 ORTHO05D000808 2.7e-09 65.9 63 50.8
HanXRQChr10g0288981 Helianthus annuus HOM05D001001 ORTHO05D000808 2.7e-09 65.9 63 50.8
HanXRQChr10g0301281 Helianthus annuus HOM05D001001 ORTHO05D000808 2.7e-09 65.9 63 50.8
HanXRQChr10g0301931 Helianthus annuus HOM05D001001 ORTHO05D000808 2.7e-09 65.9 63 50.8
Actinidia09546 Actinidia chinensis HOM05D001001 ORTHO05D000808 3.6e-09 65.5 91 41.8
Nn3g19658 Nelumbo nucifera HOM05D001001 ORTHO05D000808 3.6e-09 65.5 73 50.7
PSO170G0365 Papaver somniferum HOM05D001001 ORTHO05D000808 3.6e-09 65.5 64 54.7
Rhsim02G0037400 Rhododendron simsii HOM05D001289 ORTHO05D002298 3.6e-09 65.5 97 41.2
MBI10_g08042_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 6.1e-09 64.7 77 46.8
TAR636G0472 Trochodendron aralioides HOM05D001001 ORTHO05D000808 8.0e-09 64.3 92 44.6
Aqoxy5G02005 Aquilegia oxysepala HOM05D001001 ORTHO05D000808 1.0e-08 63.9 93 37.6
Os03g0427300 Oryza sativa ssp. japonica HOM05D001001 ORTHO05D000808 1.4e-08 63.5 93 36.6
PSO675G5077 Papaver somniferum HOM05D001001 ORTHO05D000808 1.4e-08 63.5 97 46.4
PGR031G2769 Punica granatum HOM05D001001 ORTHO05D000808 1.4e-08 63.5 104 39.4
AUR62011869 Chenopodium quinoa HOM05D001001 ORTHO05D000808 1.8e-08 63.2 92 40.2
PSO675G6776 Papaver somniferum HOM05D001001 ORTHO05D000808 1.8e-08 63.2 86 44.2
Sed0011349 Sechium edule HOM05D001001 ORTHO05D000808 1.8e-08 63.2 109 36.7
TAR636G0243 Trochodendron aralioides HOM05D001001 ORTHO05D000808 1.8e-08 63.2 92 43.5
TAR636G0607 Trochodendron aralioides HOM05D001001 ORTHO05D000808 1.8e-08 63.2 66 51.5
Carub.0008s0440 Capsella rubella HOM05D001001 ORTHO05D000808 2.3e-08 62.8 93 44.1
Carub.0008s0441 Capsella rubella HOM05D001001 ORTHO05D000808 2.3e-08 62.8 93 44.1
Carub.0246s0002 Capsella rubella HOM05D001001 ORTHO05D000808 2.3e-08 62.8 93 44.1
PSO732G0332 Papaver somniferum HOM05D001001 ORTHO05D000808 2.3e-08 62.8 76 48.7
Potri.002G038100 Populus trichocarpa HOM05D001001 ORTHO05D000808 2.3e-08 62.8 130 32.3
Aqoxy5G00247 Aquilegia oxysepala HOM05D001001 ORTHO05D000808 3.0e-08 62.4 89 41.6
PSO017G5065 Papaver somniferum HOM05D001001 ORTHO05D000808 3.0e-08 62.4 82 46.3
PGR044G2351 Punica granatum HOM05D001001 ORTHO05D000808 3.0e-08 62.4 87 46.0
Dinv29858 Davidia involucrata HOM05D001001 ORTHO05D000808 4.0e-08 62.0 121 38.0
Cfa002430 Carpinus fangiana HOM05D001001 ORTHO05D000808 5.2e-08 61.6 91 41.8
Nn1g03035 Nelumbo nucifera HOM05D001001 ORTHO05D000808 5.2e-08 61.6 104 37.5
Aa31LG1G9070 Aethionema arabicum HOM05D001001 ORTHO05D000808 6.7e-08 61.2 80 45.0
Lsat_1_v5_gn_5_183421 Lactuca sativa HOM05D001001 ORTHO05D000808 6.7e-08 61.2 110 37.3
Lj3A694T57 Lonicera japonica HOM05D001001 ORTHO05D000808 6.7e-08 61.2 105 41.9
CDE02G2370 Ceratophyllum demersum HOM05D001001 ORTHO05D000808 8.8e-08 60.8 129 34.9
Nn6g31700 Nelumbo nucifera HOM05D001001 ORTHO05D000808 1.2e-07 60.5 80 43.8
Nitab4.5_0000326g0110 Nicotiana tabacum HOM05D001001 ORTHO05D000808 1.2e-07 60.5 105 39.0
PSO675G3192 Papaver somniferum HOM05D001001 ORTHO05D000808 1.2e-07 60.5 102 41.2
BcaB07g30543 Brassica carinata HOM05D001001 ORTHO05D000808 1.5e-07 60.1 83 43.4
Lj3C694T0 Lonicera japonica HOM05D001001 ORTHO05D000808 1.5e-07 60.1 108 40.7
Ciclev10023766m.g Citrus clementina HOM05D001001 ORTHO05D000808 2.0e-07 59.7 99 38.4
Haze_24636 Corylus avellana HOM05D001001 ORTHO05D000808 2.0e-07 59.7 74 43.2
Nitab4.5_0000044g0350 Nicotiana tabacum HOM05D001001 ORTHO05D000808 2.0e-07 59.7 109 41.3
CDE08G0803 Ceratophyllum demersum HOM05D001001 ORTHO05D000808 2.6e-07 59.3 98 38.8
GSVIVG01028341001 Vitis vinifera HOM05D001001 ORTHO05D000808 2.6e-07 59.3 86 38.4
AT1G03880 Arabidopsis thaliana HOM05D001001 ORTHO05D000808 3.3e-07 58.9 73 43.8
CDE05G3487 Ceratophyllum demersum HOM05D001001 ORTHO05D000808 3.3e-07 58.9 95 33.7
Nn1g07602 Nelumbo nucifera HOM05D001001 ORTHO05D000808 3.3e-07 58.9 91 38.5
Nitab4.5_0001855g0060 Nicotiana tabacum HOM05D001001 ORTHO05D000808 3.3e-07 58.9 91 38.5
PSO063G4623 Papaver somniferum HOM05D001001 ORTHO05D000808 3.3e-07 58.9 81 44.4
BcaC05g24492 Brassica carinata HOM05D001001 ORTHO05D000808 4.4e-07 58.5 86 39.5
C05p02230 Brassica napus HOM05D001001 ORTHO05D000808 4.4e-07 58.5 86 39.5
BolC5t29001H Brassica oleracea HOM05D001001 ORTHO05D000808 4.4e-07 58.5 86 39.5
CSS0013467 Camellia sinensis var. sinensis HOM05D001001 ORTHO05D000808 4.4e-07 58.5 68 48.5
Lj2C41T5 Lonicera japonica HOM05D001001 ORTHO05D000808 4.4e-07 58.5 87 42.5
Nn2g11389 Nelumbo nucifera HOM05D001001 ORTHO05D000808 4.4e-07 58.5 80 42.5
Aqoxy2G01558 Aquilegia oxysepala HOM05D001001 ORTHO05D000808 5.7e-07 58.2 69 46.4
AL1G13460 Arabidopsis lyrata HOM05D001001 ORTHO05D000808 5.7e-07 58.2 73 43.8
Thhalv10003387m.g Eutrema salsugineum HOM05D001001 ORTHO05D000808 5.7e-07 58.2 93 39.8
Nitab4.5_0004662g0040 Nicotiana tabacum HOM05D001001 ORTHO05D000808 5.7e-07 58.2 109 40.4
Oeu059422.1 Olea europaea HOM05D001001 ORTHO05D000808 5.7e-07 58.2 89 39.3
Os02g0249000 Oryza sativa ssp. japonica HOM05D001001 ORTHO05D000808 5.7e-07 58.2 102 35.3
A10p02410 Brassica napus HOM05D001001 ORTHO05D000808 7.5e-07 57.8 86 38.4
BraA10t42510Z Brassica rapa HOM05D001001 ORTHO05D000808 7.5e-07 57.8 86 38.4
Carub.0001s0302 Capsella rubella HOM05D001001 ORTHO05D000808 7.5e-07 57.8 73 42.5
AUR62015569 Chenopodium quinoa HOM05D001001 ORTHO05D000808 7.5e-07 57.8 95 34.7
Thhalv10009410m.g Eutrema salsugineum HOM05D001001 ORTHO05D000808 7.5e-07 57.8 73 45.2
MBI07_g16251_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 7.5e-07 57.8 63 47.6
Nn5g28091 Nelumbo nucifera HOM05D001001 ORTHO05D000808 7.5e-07 57.8 46 60.9
Oeu000629.1 Olea europaea HOM05D001001 ORTHO05D000808 9.7e-07 57.4 77 40.3
SHI09773 Sapria himalayana HOM05D001001 ORTHO05D000808 9.7e-07 57.4 103 39.8
EL10Ac4g09074 Beta vulgaris HOM05D001001 ORTHO05D000808 1.3e-06 57.0 76 46.1
AUR62002139 Chenopodium quinoa HOM05D001001 ORTHO05D000808 1.3e-06 57.0 95 34.7
Manes.03G163900 Manihot esculenta HOM05D001001 ORTHO05D000808 1.3e-06 57.0 110 32.7
Nitab4.5_0006457g0010 Nicotiana tabacum HOM05D001001 ORTHO05D000808 1.3e-06 57.0 91 37.4
Peaxi162Scf00829g00216 Petunia axillaris HOM05D001001 ORTHO05D000808 1.3e-06 57.0 128 32.8
BolC2t10506H Brassica oleracea HOM05D001001 ORTHO05D000808 1.7e-06 56.6 83 41.0
Thhalv10003429m.g Eutrema salsugineum HOM05D001001 ORTHO05D000808 1.7e-06 56.6 93 41.9
Nn3g19662 Nelumbo nucifera HOM05D001001 ORTHO05D000808 1.7e-06 56.6 80 41.2
Lj1A66T65 Lonicera japonica HOM05D001001 ORTHO05D000808 2.2e-06 56.2 77 41.6
Nitab4.5_0001855g0030 Nicotiana tabacum HOM05D001001 ORTHO05D000808 2.2e-06 56.2 91 37.4
Sp1g02740 Schrenkiella parvula HOM05D001001 ORTHO05D000808 2.2e-06 56.2 86 39.5
Lj2A40T57 Lonicera japonica HOM05D001001 ORTHO05D000808 2.8e-06 55.8 87 43.7
Os02g0249800 Oryza sativa ssp. japonica HOM05D001001 ORTHO05D000808 2.8e-06 55.8 73 38.4
Os02g0249900 Oryza sativa ssp. japonica HOM05D001001 ORTHO05D000808 2.8e-06 55.8 73 38.4
Solyc09g025220.2 Solanum lycopersicum HOM05D001001 ORTHO05D000808 2.8e-06 55.8 80 38.8
BcaC06g31652 Brassica carinata HOM05D001001 ORTHO05D000808 3.7e-06 55.5 82 42.7
Os02g0268100 Oryza sativa ssp. japonica HOM05D001001 ORTHO05D000808 3.7e-06 55.5 77 41.6
Os02g0268300 Oryza sativa ssp. japonica HOM05D001001 ORTHO05D000808 3.7e-06 55.5 77 41.6
Peaxi162Scf00855g00230 Petunia axillaris HOM05D001001 ORTHO05D000808 3.7e-06 55.5 97 35.1
Aqoxy5G00248 Aquilegia oxysepala HOM05D001001 ORTHO05D000808 4.8e-06 55.1 84 38.1
CDE02G2087 Ceratophyllum demersum HOM05D001001 ORTHO05D000808 4.8e-06 55.1 94 34.0
Nn1g02776 Nelumbo nucifera HOM05D001001 ORTHO05D000808 4.8e-06 55.1 65 43.1
Sopen09g028300 Solanum pennellii HOM05D001001 ORTHO05D000808 4.8e-06 55.1 94 37.2
unitig_22.g5458 Utricularia gibba HOM05D001001 ORTHO05D000808 4.8e-06 55.1 100 38.0
GSVIVG01028337001 Vitis vinifera HOM05D001001 ORTHO05D000808 4.8e-06 55.1 89 36.0
TWI18G0589 Tripterygium wilfordii HOM05D001001 ORTHO05D000808 6.3e-06 54.7 105 37.1
AL8G15910 Arabidopsis lyrata HOM05D001001 ORTHO05D000808 8.2e-06 54.3 82 42.7
CDE08G1559 Ceratophyllum demersum HOM05D001001 ORTHO05D000808 8.2e-06 54.3 90 34.4
DCAR_018483 Daucus carota HOM05D001001 ORTHO05D000808 8.2e-06 54.3 86 34.9
Os02g0248800 Oryza sativa ssp. japonica HOM05D001001 ORTHO05D000808 8.2e-06 54.3 97 33.0
Peaxi162Scf00855g00014 Petunia axillaris HOM05D001001 ORTHO05D000808 8.2e-06 54.3 99 36.4
SalBow3G3119 Salvia bowleyana HOM05D001001 ORTHO05D000808 8.2e-06 54.3 103 35.0
Sc07g0002180 Simmondsia chinensis HOM05D001001 ORTHO05D000808 8.2e-06 54.3 91 34.1
TWI12G0797 Tripterygium wilfordii HOM05D001001 ORTHO05D000808 8.2e-06 54.3 80 36.2


User provided reference genes

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